MGE detailed information
MGE type: Genomic_island MGE length: 14508 bp
Accession: NZ_CP027449 Location: 2415325..2429832 Organism: Escherichia coli strain 2014C-3097 Replicon: chromosome
Accession: NZ_CP027449 Location: 2415325..2429832 Organism: Escherichia coli strain 2014C-3097 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W73_RS12310 () | 2411119..2412321 | + | 1203 | WP_000439180.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| C6W73_RS12315 () | 2412636..2413688 | - | 1053 | WP_001028905.1 | DUF2776 domain-containing protein | - |
| C6W73_RS12325 () | 2414072..2415696 | + | 1625 | Protein_2217 | YhiJ/YhiL family protein | - |
| C6W73_RS12330 () | 2415958..2417580 | + | 1623 | WP_001315886.1 | DUF4049 domain-containing protein | - |
| C6W73_RS28210 () | 2417770..2417883 | + | 114 | WP_001296785.1 | protein YhiY | - |
| C6W73_RS12335 () | 2417946..2419013 | + | 1068 | WP_000361467.1 | HlyD family secretion protein | - |
| C6W73_RS12340 () | 2419010..2421745 | + | 2736 | WP_000149165.1 | Ribosome-associated ATPase | VF |
| C6W73_RS12345 () | 2421745..2422869 | + | 1125 | WP_001314210.1 | ABC transporter permease | - |
| C6W73_RS12350 () | 2422942..2423217 | + | 276 | WP_001259385.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C6W73_RS12355 () | 2423214..2423573 | + | 360 | WP_000593554.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C6W73_RS12360 () | 2423623..2424483 | - | 861 | WP_001131783.1 | class II aldolase | - |
| C6W73_RS12365 () | 2424515..2424784 | - | 270 | WP_000933060.1 | HPr family phosphocarrier protein | - |
| C6W73_RS12370 () | 2424774..2426282 | - | 1509 | WP_001298718.1 | carbohydrate kinase | - |
| C6W73_RS12375 () | 2426275..2427633 | - | 1359 | WP_001298729.1 | PTS galactitol transporter subunit IIC | - |
| C6W73_RS12380 () | 2427710..2427991 | - | 282 | WP_000084022.1 | PTS sugar transporter subunit IIB | - |
| C6W73_RS12385 () | 2427988..2428461 | - | 474 | WP_001161553.1 | PTS sugar transporter subunit IIA | - |
| C6W73_RS12390 () | 2428486..2429232 | - | 747 | WP_000839066.1 | GntR family transcriptional regulator | - |
| C6W73_RS12395 () | 2429431..2429832 | - | 402 | WP_001190062.1 | nickel-responsive transcriptional regulator NikR | - |
| C6W73_RS12400 () | 2429838..2430644 | - | 807 | WP_000173666.1 | nickel import ATP-binding protein NikE | - |
| C6W73_RS12405 () | 2430641..2431405 | - | 765 | WP_001136236.1 | nickel import ATP-binding protein NikD | - |
| C6W73_RS12410 () | 2431405..2432238 | - | 834 | WP_001008963.1 | nickel ABC transporter permease subunit NikC | - |
| C6W73_RS12415 () | 2432235..2433179 | - | 945 | WP_000947068.1 | nickel ABC transporter permease subunit NikB | - |
| C6W73_RS12420 () | 2433179..2434753 | - | 1575 | WP_000953356.1 | nickel ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|