MGE detailed information
MGE type: Prophage MGE length: 49437 bp
Accession: NZ_CP027447 Location: 879785..929221 Organism: Escherichia coli strain 2014C-3075 Replicon: chromosome
Accession: NZ_CP027447 Location: 879785..929221 Organism: Escherichia coli strain 2014C-3075 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W72_RS04525 () | 876298..877044 | + | 747 | WP_001296081.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C6W72_RS04530 () | 877133..877819 | + | 687 | WP_000215553.1 | DNA-binding transcriptional regulator YdfH | - |
| C6W72_RS04535 () | 877997..878200 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C6W72_RS04540 () | 878236..879696 | - | 1461 | WP_096986583.1 | mannitol dehydrogenase family protein | - |
| C6W72_RS04545 () | 879785..881068 | - | 1284 | Protein_853 | MHS family MFS transporter YdfJ | - |
| C6W72_RS27520 () | 881672..881785 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| C6W72_RS04550 () | 881854..882087 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C6W72_RS04555 () | 882404..882994 | + | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C6W72_RS04560 () | 883092..883202 | - | 111 | Protein_857 | tail fiber assembly protein | - |
| C6W72_RS04565 () | 883222..883515 | - | 294 | WP_000355360.1 | hypothetical protein | - |
| C6W72_RS04570 () | 883528..883806 | - | 279 | WP_000654171.1 | hypothetical protein | - |
| C6W72_RS04575 () | 883803..885827 | - | 2025 | WP_097291164.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6W72_RS04580 () | 885892..886491 | - | 600 | WP_001230558.1 | Tyrosine-protein kinase YwqD | VF |
| C6W72_RS04585 () | 886558..890037 | - | 3480 | WP_047664591.1 | host specificity protein J | - |
| C6W72_RS04590 () | 890098..890730 | - | 633 | WP_072032980.1 | tail assembly protein | - |
| C6W72_RS04595 () | 890667..891410 | - | 744 | WP_001361515.1 | C40 family peptidase | - |
| C6W72_RS04600 () | 891416..892114 | - | 699 | WP_001152639.1 | phage minor tail protein L | - |
| C6W72_RS04605 () | 892114..892443 | - | 330 | WP_000847345.1 | phage tail protein | - |
| C6W72_RS04610 () | 892440..895019 | - | 2580 | WP_097291163.1 | phage tail tape measure protein | - |
| C6W72_RS04615 () | 895012..895446 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| C6W72_RS04620 () | 895428..895850 | - | 423 | WP_097291162.1 | phage minor tail protein G | - |
| C6W72_RS04625 () | 895866..896606 | - | 741 | WP_001349920.1 | phage tail protein | - |
| C6W72_RS04630 () | 896614..897009 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| C6W72_RS04635 () | 897006..897584 | - | 579 | WP_000975070.1 | phage tail protein | - |
| C6W72_RS04640 () | 897596..897949 | - | 354 | WP_000753007.1 | head-tail joining protein | - |
| C6W72_RS04645 () | 897961..898356 | - | 396 | WP_000158868.1 | DNA-packaging protein FI | - |
| C6W72_RS04650 () | 898398..899423 | - | 1026 | WP_000063218.1 | major capsid protein | - |
| C6W72_RS04655 () | 899479..899811 | - | 333 | WP_047663921.1 | head decoration protein | - |
| C6W72_RS04660 () | 899821..901140 | - | 1320 | WP_021563108.1 | S49 family peptidase | - |
| C6W72_RS04665 () | 901121..902722 | - | 1602 | WP_001676384.1 | phage portal protein | - |
| C6W72_RS04670 () | 902719..902925 | - | 207 | WP_000198149.1 | gpW family protein | - |
| C6W72_RS04675 () | 902922..904847 | - | 1926 | WP_096247525.1 | phage terminase large subunit family protein | - |
| C6W72_RS04680 () | 904822..905367 | - | 546 | WP_000453576.1 | DNA-packaging protein | - |
| C6W72_RS04690 () | 905756..905989 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| C6W72_RS04695 () | 906047..906457 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| C6W72_RS04700 () | 906609..906782 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C6W72_RS27525 () | 906954..907109 | - | 156 | WP_123001190.1 | hypothetical protein | - |
| C6W72_RS27530 () | 907189..907254 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| C6W72_RS04710 () | 907257..907445 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| C6W72_RS04715 () | 907456..907668 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C6W72_RS04720 () | 908031..908528 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| C6W72_RS04725 () | 908525..909058 | - | 534 | WP_001092971.1 | lysozyme | - |
| C6W72_RS04730 () | 909055..909366 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| C6W72_RS04735 () | 909371..909586 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| C6W72_RS27870 () | 909806..909976 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| C6W72_RS04740 () | 910340..910555 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| C6W72_RS04745 () | 910856..911068 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| C6W72_RS27535 () | 911123..911212 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| C6W72_RS04750 () | 911490..912242 | - | 753 | WP_001047135.1 | antitermination protein | - |
| C6W72_RS04755 () | 912256..913305 | - | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| C6W72_RS04760 () | 913307..913585 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| C6W72_RS04765 () | 913652..913903 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| C6W72_RS04770 () | 914120..914275 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6W72_RS04775 () | 914347..914634 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C6W72_RS04780 () | 914634..914873 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C6W72_RS04785 () | 914898..915203 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| C6W72_RS04790 () | 915406..915738 | + | 333 | WP_001301033.1 | protein FlxA | - |
| C6W72_RS04800 () | 916175..917488 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| C6W72_RS27705 () | 918257..918544 | - | 288 | Protein_907 | hypothetical protein | - |
| C6W72_RS04815 () | 919155..919511 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| C6W72_RS04820 () | 919508..919930 | - | 423 | WP_001151262.1 | DUF977 family protein | - |
| C6W72_RS04825 () | 919971..920936 | - | 966 | WP_000054512.1 | hypothetical protein | - |
| C6W72_RS04830 () | 920917..921438 | - | 522 | WP_000705358.1 | hypothetical protein | - |
| C6W72_RS04835 () | 921422..921652 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| C6W72_RS04840 () | 921736..922143 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| C6W72_RS04845 () | 922310..922465 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| C6W72_RS04855 () | 922625..922843 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| C6W72_RS04865 () | 923411..923599 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| C6W72_RS04870 () | 923596..923787 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| C6W72_RS04875 () | 923880..926351 | + | 2472 | WP_000048342.1 | exonuclease | - |
| C6W72_RS04880 () | 926424..926675 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| C6W72_RS04885 () | 926710..927990 | + | 1281 | WP_123001189.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C6W72_RS04895 () | 928178..929197 | - | 1020 | WP_000836084.1 | Zn-dependent oxidoreductase | - |
| C6W72_RS04900 () | 929209..930423 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C6W72_RS04910 () | 930629..930955 | - | 327 | WP_001304355.1 | YnfA family protein | - |
| C6W72_RS04915 () | 931090..931431 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| C6W72_RS04920 () | 931466..932026 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| C6W72_RS04925 () | 932029..932739 | - | 711 | WP_032142801.1 | YnfC family lipoprotein | - |
| C6W72_RS04930 () | 932847..933152 | + | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|