MGE detailed information
MGE type: Prophage MGE length: 93756 bp
Accession: NZ_CP027445 Location: 995952..1089707 Organism: Escherichia coli strain 2013C-3492 Replicon: chromosome
Accession: NZ_CP027445 Location: 995952..1089707 Organism: Escherichia coli strain 2013C-3492 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W68_RS05560 () | 991050..992843 | - | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
| C6W68_RS05565 () | 992840..993958 | - | 1119 | WP_001058323.1 | hydrogenase 1 small subunit | - |
| C6W68_RS05580 () | 995075..995827 | + | 753 | WP_012817749.1 | type III effector | - |
| C6W68_RS05585 () | 995952..996221 | - | 270 | WP_001023445.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6W68_RS05590 () | 996223..997536 | - | 1314 | WP_032212660.1 | ISNCY family transposase KIS | Transposase |
| C6W68_RS05595 () | 997601..998224 | - | 624 | WP_001216290.1 | Glutathione-regulated potassium-efflux system protein KefB | VF |
| C6W68_RS28610 () | 998293..999975 | - | 1683 | WP_199851559.1 | DUF1983 domain-containing protein | - |
| C6W68_RS28615 () | 999968..1001770 | - | 1803 | WP_206781065.1 | host specificity protein J | - |
| C6W68_RS05605 () | 1002016..1002648 | - | 633 | WP_158707842.1 | tail assembly protein | - |
| C6W68_RS05610 () | 1002594..1003337 | - | 744 | WP_000194707.1 | C40 family peptidase | - |
| C6W68_RS05615 () | 1003348..1004046 | - | 699 | WP_001443841.1 | phage minor tail protein L | - |
| C6W68_RS05620 () | 1004046..1004375 | - | 330 | WP_000847298.1 | phage tail protein | - |
| C6W68_RS05625 () | 1004372..1006984 | - | 2613 | WP_000081788.1 | phage tail tape measure protein | - |
| C6W68_RS05630 () | 1006965..1007378 | - | 414 | WP_000533442.1 | phage tail assembly protein T | - |
| C6W68_RS05635 () | 1007405..1007827 | - | 423 | WP_106888124.1 | phage minor tail protein G | - |
| C6W68_RS05640 () | 1007841..1008593 | - | 753 | WP_000235067.1 | Ig domain-containing protein | - |
| C6W68_RS05645 () | 1008601..1008996 | - | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| C6W68_RS05650 () | 1008993..1009571 | - | 579 | WP_000975098.1 | phage tail protein | - |
| C6W68_RS05655 () | 1009583..1009936 | - | 354 | WP_000752994.1 | head-tail joining protein | - |
| C6W68_RS05660 () | 1009948..1010343 | - | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| C6W68_RS05665 () | 1010385..1011410 | - | 1026 | WP_000063258.1 | major capsid protein | - |
| C6W68_RS05670 () | 1011466..1011798 | - | 333 | WP_001365129.1 | head decoration protein | - |
| C6W68_RS05675 () | 1011808..1013127 | - | 1320 | WP_000123251.1 | S49 family peptidase | - |
| C6W68_RS05680 () | 1013108..1014709 | - | 1602 | WP_001415980.1 | phage portal protein | - |
| C6W68_RS05685 () | 1014706..1014912 | - | 207 | WP_000198153.1 | gpW family protein | - |
| C6W68_RS05690 () | 1014909..1016834 | - | 1926 | WP_106888125.1 | phage terminase large subunit family protein | - |
| C6W68_RS05695 () | 1016809..1017354 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| C6W68_RS05705 () | 1017740..1017964 | + | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C6W68_RS05710 () | 1018046..1018360 | - | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C6W68_RS28280 () | 1018887..1019072 | - | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C6W68_RS28285 () | 1019295..1019441 | - | 147 | WP_000539795.1 | hypothetical protein | - |
| C6W68_RS05725 () | 1019441..1020010 | - | 570 | WP_045904330.1 | antirepressor | - |
| C6W68_RS05730 () | 1020281..1020814 | - | 534 | WP_001092860.1 | lysozyme | - |
| C6W68_RS05735 () | 1020857..1021373 | - | 517 | Protein_1061 | hypothetical protein | - |
| C6W68_RS05740 () | 1021377..1021592 | - | 216 | WP_000284516.1 | class II holin family protein | - |
| C6W68_RS05745 () | 1021669..1021941 | - | 273 | WP_001290231.1 | DUF826 domain-containing protein | - |
| C6W68_RS05750 () | 1021982..1022161 | - | 180 | WP_000143464.1 | DUF1378 family protein | - |
| C6W68_RS05755 () | 1022297..1024234 | - | 1938 | WP_080029427.1 | DUF1737 domain-containing protein | - |
| C6W68_RS05765 () | 1024461..1024716 | - | 256 | Protein_1066 | DUF3927 family protein | - |
| C6W68_RS05770 () | 1024713..1025144 | - | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| C6W68_RS05785 () | 1025595..1026308 | - | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C6W68_RS05790 () | 1026444..1026641 | - | 198 | WP_000917763.1 | hypothetical protein | - |
| C6W68_RS05795 () | 1026866..1027420 | - | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C6W68_RS05800 () | 1027429..1027788 | - | 360 | WP_001217447.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6W68_RS05805 () | 1027801..1028850 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C6W68_RS05810 () | 1028852..1029124 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| C6W68_RS05815 () | 1029246..1029590 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C6W68_RS05820 () | 1029710..1029865 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C6W68_RS05825 () | 1030156..1030713 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| C6W68_RS05830 () | 1030715..1030933 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C6W68_RS05835 () | 1031061..1031372 | - | 312 | WP_000034815.1 | hypothetical protein | - |
| C6W68_RS05840 () | 1031365..1031592 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| C6W68_RS05845 () | 1031589..1031870 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| C6W68_RS05850 () | 1031903..1032664 | - | 762 | WP_106888126.1 | DUF1627 domain-containing protein | - |
| C6W68_RS05855 () | 1032698..1033159 | - | 462 | WP_000139447.1 | replication protein | - |
| C6W68_RS28295 () | 1033152..1034189 | - | 1038 | WP_001435286.1 | hypothetical protein | - |
| C6W68_RS05865 () | 1034258..1034683 | - | 426 | WP_000693921.1 | Rha family transcriptional regulator | - |
| C6W68_RS05870 () | 1034680..1034907 | - | 228 | WP_001261756.1 | cell division protein | - |
| C6W68_RS05875 () | 1035007..1035650 | + | 644 | Protein_1086 | LexA family transcriptional regulator | - |
| C6W68_RS05880 () | 1035924..1036076 | + | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C6W68_RS05885 () | 1036088..1036726 | + | 639 | WP_000394543.1 | hypothetical protein | - |
| C6W68_RS05890 () | 1036727..1036936 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| C6W68_RS05900 () | 1037504..1037692 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| C6W68_RS05905 () | 1037689..1037880 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| C6W68_RS05910 () | 1037974..1040424 | + | 2451 | WP_106888127.1 | exonuclease | - |
| C6W68_RS05915 () | 1040492..1040734 | + | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| C6W68_RS05920 () | 1040712..1041731 | + | 1020 | WP_001299351.1 | Phosphoribosylformylglycinamidine cyclo-ligase ; Integrase | Integrase |
| C6W68_RS05930 () | 1042535..1043146 | + | 612 | WP_074433510.1 | Phosphoribosylglycinamide formyltransferase | VF |
| C6W68_RS05935 () | 1043272..1043541 | - | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6W68_RS05940 () | 1043543..1044856 | - | 1314 | WP_106888128.1 | ISNCY family transposase KIS | Transposase |
| C6W68_RS05945 () | 1044921..1045516 | - | 596 | Protein_1098 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C6W68_RS05950 () | 1045584..1048979 | - | 3396 | WP_047087988.1 | host specificity protein J | - |
| C6W68_RS05955 () | 1049040..1049672 | - | 633 | WP_000090891.1 | tail assembly protein | - |
| C6W68_RS05960 () | 1049609..1050352 | - | 744 | WP_047087989.1 | C40 family peptidase | - |
| C6W68_RS05965 () | 1050358..1051056 | - | 699 | WP_001152619.1 | phage minor tail protein L | - |
| C6W68_RS05970 () | 1051056..1051385 | - | 330 | WP_000847347.1 | phage tail protein | - |
| C6W68_RS05975 () | 1051382..1053943 | - | 2562 | WP_047087991.1 | phage tail tape measure protein | - |
| C6W68_RS05980 () | 1053936..1054370 | - | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| C6W68_RS05985 () | 1054352..1054774 | - | 423 | WP_000479169.1 | phage minor tail protein G | - |
| C6W68_RS05990 () | 1054790..1055530 | - | 741 | WP_001342267.1 | phage tail protein | - |
| C6W68_RS05995 () | 1055538..1055933 | - | 396 | WP_032207007.1 | phage minor tail U family protein | - |
| C6W68_RS06000 () | 1055930..1056505 | - | 576 | WP_000975037.1 | phage tail protein | - |
| C6W68_RS06005 () | 1056520..1056873 | - | 354 | WP_001204544.1 | tail attachment protein | - |
| C6W68_RS06010 () | 1056866..1057240 | - | 375 | WP_000201528.1 | hypothetical protein | - |
| C6W68_RS06015 () | 1057292..1058320 | - | 1029 | WP_000522630.1 | major capsid protein | - |
| C6W68_RS06020 () | 1058378..1058725 | - | 348 | WP_000256818.1 | head decoration protein | - |
| C6W68_RS06025 () | 1058762..1060267 | - | 1506 | WP_001254039.1 | S49 family peptidase | - |
| C6W68_RS06030 () | 1060257..1061849 | - | 1593 | WP_001430223.1 | phage portal protein | - |
| C6W68_RS06035 () | 1061846..1062052 | - | 207 | WP_000258991.1 | gpW family protein | - |
| C6W68_RS06040 () | 1062036..1063964 | - | 1929 | WP_032207005.1 | phage terminase large subunit family protein | - |
| C6W68_RS06045 () | 1063936..1064445 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| C6W68_RS06055 () | 1064848..1065072 | + | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| C6W68_RS06060 () | 1065154..1065467 | - | 314 | Protein_1120 | PerC family transcriptional regulator | - |
| C6W68_RS28300 () | 1065996..1066181 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6W68_RS06075 () | 1066403..1066516 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| C6W68_RS06080 () | 1066737..1067270 | - | 534 | WP_001003111.1 | lysozyme | - |
| C6W68_RS06090 () | 1067430..1067702 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| C6W68_RS06100 () | 1067958..1068173 | - | 216 | WP_053897820.1 | class II holin family protein | - |
| C6W68_RS06110 () | 1068612..1070462 | - | 1851 | WP_106888129.1 | SASA family carbohydrate esterase | - |
| C6W68_RS06115 () | 1070905..1071036 | - | 132 | WP_001344632.1 | DUF3927 family protein | - |
| C6W68_RS06120 () | 1071033..1071395 | - | 363 | Protein_1128 | tellurite resistance TerB family protein | - |
| C6W68_RS06125 () | 1071633..1072454 | - | 822 | WP_047088297.1 | antitermination protein | - |
| C6W68_RS06130 () | 1072451..1072825 | - | 375 | WP_001217410.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6W68_RS06135 () | 1072838..1073887 | - | 1050 | WP_106888130.1 | DUF968 domain-containing protein | - |
| C6W68_RS06140 () | 1073889..1074167 | - | 279 | WP_032207160.1 | hypothetical protein | - |
| C6W68_RS06150 () | 1074600..1075076 | - | 477 | WP_000284536.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C6W68_RS06155 () | 1075079..1075438 | - | 360 | WP_001219082.1 | helix-turn-helix domain-containing protein | - |
| C6W68_RS06160 () | 1075683..1075838 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6W68_RS06170 () | 1076083..1076187 | - | 105 | WP_001278459.1 | hypothetical protein | - |
| C6W68_RS06175 () | 1076297..1077130 | - | 834 | WP_032206192.1 | hypothetical protein | - |
| C6W68_RS06180 () | 1077166..1077378 | - | 213 | WP_032206194.1 | hypothetical protein | - |
| C6W68_RS06185 () | 1077424..1077783 | - | 360 | WP_032206196.1 | hypothetical protein | - |
| C6W68_RS06190 () | 1077837..1078262 | - | 426 | WP_047087727.1 | DUF977 family protein | - |
| C6W68_RS06195 () | 1078303..1079373 | - | 1071 | WP_106888131.1 | phage replisome organizer | - |
| C6W68_RS06200 () | 1079445..1079870 | - | 426 | WP_000693918.1 | Rha family transcriptional regulator | - |
| C6W68_RS06205 () | 1079867..1080130 | - | 264 | WP_001048459.1 | helix-turn-helix domain-containing protein | - |
| C6W68_RS06210 () | 1080238..1080738 | + | 501 | WP_021568728.1 | helix-turn-helix transcriptional regulator | - |
| C6W68_RS06215 () | 1080756..1080947 | + | 192 | WP_000108762.1 | hypothetical protein | Antitoxin Detail |
| C6W68_RS06220 () | 1080947..1081237 | + | 291 | WP_021568727.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6W68_RS06225 () | 1081512..1081664 | + | 153 | WP_000367377.1 | DUF1391 family protein | - |
| C6W68_RS06230 () | 1081763..1082209 | - | 447 | WP_000373334.1 | hypothetical protein | - |
| C6W68_RS06240 () | 1082922..1083110 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| C6W68_RS06245 () | 1083107..1083298 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| C6W68_RS06250 () | 1083392..1085867 | + | 2476 | Protein_1151 | 3'-5' exoribonuclease | - |
| C6W68_RS06255 () | 1085935..1086138 | + | 204 | WP_099357990.1 | DUF4224 domain-containing protein | - |
| C6W68_RS06260 () | 1086200..1087356 | + | 1157 | WP_106888078.1 | IS3 family transposase ISSd1 | Transposase |
| C6W68_RS06265 () | 1087422..1087918 | + | 497 | Protein_1154 | hypothetical protein ; Integrase | Integrase |
| C6W68_RS06275 () | 1089132..1089707 | + | 576 | WP_106888132.1 | putative glutamine ABC transporter permease protein GlnM ; Integrase | Integrase |
| C6W68_RS06280 () | 1090115..1090774 | + | 660 | WP_000375138.1 | FtsH protease modulator YccA | - |
| C6W68_RS06285 () | 1090865..1091194 | + | 330 | WP_000904442.1 | sulfurtransferase TusE | - |
| C6W68_RS06290 () | 1091191..1091469 | - | 279 | WP_000048252.1 | acylphosphatase | - |
| C6W68_RS06295 () | 1091564..1092754 | + | 1191 | WP_000116288.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| C6W68_RS06300 () | 1092812..1093129 | + | 318 | WP_047087198.1 | heat shock protein HspQ | - |
| C6W68_RS06305 () | 1093174..1093587 | - | 414 | WP_001343235.1 | CoA-binding protein | - |
| C6W68_RS06310 () | 1093760..1094422 | + | 663 | WP_000847791.1 | DUF2057 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|