MGE detailed information
MGE type: Prophage MGE length: 68743 bp
Accession: NZ_CP027442 Location: 4041064..4109806 Organism: Escherichia coli strain 2013C-3252 Replicon: chromosome
Accession: NZ_CP027442 Location: 4041064..4109806 Organism: Escherichia coli strain 2013C-3252 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ69_RS22110 () | 4036188..4036631 | - | 444 | WP_000786398.1 | DNA polymerase III subunit chi | - |
| MJ69_RS22115 () | 4036985..4038496 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| MJ69_RS32600 () | 4038650..4038700 | + | 51 | WP_211180521.1 | protein YtgA | - |
| MJ69_RS22120 () | 4038763..4039863 | + | 1101 | WP_000584109.1 | LPS export ABC transporter permease LptF | - |
| MJ69_RS22125 () | 4039863..4040945 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| MJ69_RS22130 () | 4041064..4042566 | - | 1503 | WP_001332879.1 | DUF853 domain-containing protein | - |
| MJ69_RS22135 () | 4042696..4043715 | - | 1020 | WP_000061768.1 | NADPH-dependent aldehyde reductase Ahr | - |
| MJ69_RS22145 () | 4044159..4045421 | + | 1263 | WP_000772685.1 | hypothetical protein ; Integrase | Integrase |
| MJ69_RS22150 () | 4045665..4046504 | - | 840 | WP_000356577.1 | hypothetical protein | - |
| MJ69_RS22155 () | 4046643..4048229 | - | 1587 | WP_000091133.1 | hypothetical protein | - |
| MJ69_RS22165 () | 4048519..4049196 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| MJ69_RS22170 () | 4049196..4049543 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| MJ69_RS22175 () | 4049563..4051134 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| MJ69_RS22180 () | 4051444..4051716 | - | 273 | WP_001185332.1 | ogr/Delta-like zinc finger family protein | - |
| MJ69_RS22185 () | 4051718..4052272 | - | 555 | WP_000991130.1 | hypothetical protein | - |
| MJ69_RS22190 () | 4052269..4053021 | - | 753 | WP_000214377.1 | hypothetical protein | - |
| MJ69_RS22195 () | 4053936..4054196 | + | 261 | WP_001084853.1 | AlpA family transcriptional regulator | - |
| MJ69_RS22200 () | 4054193..4054741 | + | 549 | WP_000761643.1 | host cell division inhibitor Icd-like protein | - |
| MJ69_RS22205 () | 4054741..4054965 | + | 225 | WP_001014979.1 | hypothetical protein | - |
| MJ69_RS22210 () | 4054962..4055285 | + | 324 | WP_000842358.1 | DUF5375 family protein | - |
| MJ69_RS22215 () | 4055300..4057633 | + | 2334 | WP_000016235.1 | toprim domain-containing protein | - |
| MJ69_RS22220 () | 4058539..4059363 | + | 825 | WP_000594911.1 | hypothetical protein | - |
| MJ69_RS22225 () | 4059412..4059984 | - | 573 | WP_000227281.1 | hypothetical protein | - |
| MJ69_RS22235 () | 4060085..4061255 | + | 1171 | Protein_4058 | IS3 family transposase | - |
| MJ69_RS32155 () | 4061338..4061595 | + | 258 | WP_000177060.1 | hypothetical protein | - |
| MJ69_RS22245 () | 4062153..4062920 | - | 768 | WP_000175457.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| MJ69_RS22250 () | 4062921..4063877 | - | 957 | WP_000684856.1 | Vitamin B12 import system permease protein BtuC | VF |
| MJ69_RS22255 () | 4063874..4064872 | - | 999 | WP_000125183.1 | Vitamin B12 import system permease protein BtuC | VF |
| MJ69_RS22260 () | 4064869..4065771 | - | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| MJ69_RS22265 () | 4065816..4068140 | - | 2325 | WP_000188267.1 | Fe(3+) dicitrate transport protein FecA | - |
| MJ69_RS22270 () | 4068227..4069180 | - | 954 | WP_106907402.1 | fec operon regulator FecR | - |
| MJ69_RS22275 () | 4069177..4069697 | - | 521 | Protein_4066 | RNA polymerase sigma factor FecI | - |
| MJ69_RS32605 () | 4069834..4069902 | + | 69 | WP_211180522.1 | protein YkiE | - |
| MJ69_RS22285 () | 4069989..4070686 | + | 698 | Protein_4068 | IS1 family transposase | - |
| MJ69_RS22290 () | 4070706..4070771 | - | 66 | Protein_4069 | omptin family outer membrane protease | - |
| MJ69_RS22295 () | 4071004..4071108 | + | 105 | Protein_4070 | integrase core domain-containing protein | - |
| MJ69_RS22300 () | 4071448..4071705 | + | 258 | WP_000555341.1 | hypothetical protein | - |
| MJ69_RS22310 () | 4072025..4072156 | - | 132 | Protein_4072 | IS3 family transposase | - |
| MJ69_RS22315 () | 4072438..4073796 | + | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| MJ69_RS22320 () | 4074035..4075420 | - | 1386 | WP_000998019.1 | IS66 family transposase ISEc8 | Transposase |
| MJ69_RS22325 () | 4075470..4075817 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| MJ69_RS22330 () | 4075814..4076194 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| MJ69_RS22340 () | 4076549..4076983 | - | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| MJ69_RS22345 () | 4076971..4077372 | - | 402 | WP_000271003.1 | hypothetical protein | - |
| MJ69_RS22350 () | 4077538..4078107 | - | 570 | WP_000221529.1 | inovirus Gp2 family protein | - |
| MJ69_RS22355 () | 4078847..4080418 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| MJ69_RS22360 () | 4080438..4080785 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| MJ69_RS22365 () | 4080785..4081462 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| MJ69_RS22375 () | 4081530..4081655 | - | 126 | Protein_4083 | hemolysin activation protein | - |
| MJ69_RS22385 () | 4082412..4082618 | + | 207 | WP_000235215.1 | AlpA family phage regulatory protein | - |
| MJ69_RS22390 () | 4082713..4082985 | + | 273 | Protein_4085 | hypothetical protein | - |
| MJ69_RS22395 () | 4083068..4083472 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| MJ69_RS22400 () | 4083469..4083816 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| MJ69_RS22405 () | 4083865..4085403 | + | 1539 | WP_000099160.1 | IS66 family transposase ISEc22 | Transposase |
| MJ69_RS22410 () | 4085469..4085777 | + | 309 | WP_001432656.1 | hypothetical protein | - |
| MJ69_RS22425 () | 4086099..4087583 | - | 1485 | WP_001428405.1 | DUF3987 domain-containing protein | - |
| MJ69_RS22430 () | 4088095..4089251 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| MJ69_RS22440 () | 4090081..4090953 | + | 873 | WP_001069782.1 | GTPase family protein | - |
| MJ69_RS22445 () | 4091325..4094444 | + | 3120 | WP_000820610.1 | autotransporter adhesin Ag43 | - |
| MJ69_RS22450 () | 4094565..4097081 | + | 2517 | WP_023442299.1 | hypothetical protein | - |
| MJ69_RS22455 () | 4097157..4097612 | + | 456 | WP_000581504.1 | hypothetical protein | - |
| MJ69_RS22460 () | 4097691..4097924 | + | 234 | WP_001119729.1 | DUF905 family protein | - |
| MJ69_RS22470 () | 4098024..4098842 | + | 819 | WP_001234622.1 | DUF945 domain-containing protein | - |
| MJ69_RS22475 () | 4098897..4099382 | + | 486 | WP_000849588.1 | antirestriction protein | - |
| MJ69_RS22480 () | 4099398..4099874 | + | 477 | WP_001186774.1 | RadC family protein | - |
| MJ69_RS22485 () | 4099937..4100158 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| MJ69_RS22490 () | 4100321..4100689 | + | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| MJ69_RS22495 () | 4100779..4101153 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| MJ69_RS22500 () | 4101150..4101638 | + | 489 | WP_000777547.1 | hypothetical protein | - |
| MJ69_RS22505 () | 4101650..4101847 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| MJ69_RS32430 () | 4101932..4102084 | + | 153 | WP_001280445.1 | hypothetical protein | - |
| MJ69_RS22530 () | 4103129..4103779 | + | 651 | WP_001037966.1 | HNH endonuclease | - |
| MJ69_RS22535 () | 4103787..4104767 | - | 981 | WP_000991415.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| MJ69_RS22540 () | 4104832..4105938 | - | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| MJ69_RS22545 () | 4105958..4106674 | - | 717 | WP_001443018.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| MJ69_RS22565 () | 4108130..4108732 | + | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| MJ69_RS22570 () | 4109210..4109806 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| MJ69_RS22580 () | 4110287..4110835 | + | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| MJ69_RS22585 () | 4110900..4111439 | + | 540 | WP_000824105.1 | type 1 fimbrial protein | - |
| MJ69_RS22590 () | 4111476..4112201 | + | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|