MGE detailed information
MGE type: Prophage MGE length: 70672 bp
Accession: NZ_CP027440 Location: 586305..656976 Organism: Escherichia coli strain 2012C-4502 Replicon: chromosome
Accession: NZ_CP027440 Location: 586305..656976 Organism: Escherichia coli strain 2012C-4502 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W69_RS03265 () | 582429..583796 | - | 1368 | WP_000151243.1 | MHS family MFS transporter YdfJ | - |
| C6W69_RS03270 () | 583854..584873 | - | 1020 | WP_000836084.1 | Zn-dependent oxidoreductase | - |
| C6W69_RS03275 () | 584885..586099 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C6W69_RS03285 () | 586305..586631 | - | 327 | WP_001374832.1 | YnfA family protein | - |
| C6W69_RS03290 () | 586766..587107 | + | 342 | WP_000705197.1 | DUF1283 family protein | - |
| C6W69_RS03295 () | 587142..587702 | + | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| C6W69_RS03300 () | 587705..588415 | - | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| C6W69_RS03305 () | 588523..588828 | + | 306 | WP_001317855.1 | DUF1161 domain-containing protein | - |
| C6W69_RS03310 () | 589027..591453 | + | 2427 | WP_000041658.1 | dimethyl sulfoxide reductase subunit A | - |
| C6W69_RS03315 () | 591514..593937 | + | 2424 | Protein_618 | dimethyl sulfoxide reductase subunit A | - |
| C6W69_RS03320 () | 593948..594052 | + | 105 | Protein_619 | 4Fe-4S binding protein | - |
| C6W69_RS03330 () | 594481..595110 | + | 630 | WP_106905067.1 | antA/AntB antirepressor family protein | - |
| C6W69_RS03335 () | 595158..595379 | + | 222 | WP_000763356.1 | TraR/DksA family transcriptional regulator | - |
| C6W69_RS03340 () | 595376..595660 | + | 285 | WP_000020908.1 | DUF4752 family protein | - |
| C6W69_RS03345 () | 595647..596597 | + | 951 | WP_024199259.1 | ead/Ea22-like family protein | - |
| C6W69_RS26450 () | 596599..596777 | + | 179 | Protein_624 | hypothetical protein | - |
| C6W69_RS03355 () | 597111..598037 | + | 927 | WP_000628744.1 | DUF551 domain-containing protein | - |
| C6W69_RS03360 () | 598124..598315 | - | 192 | WP_000481379.1 | hypothetical protein | - |
| C6W69_RS03365 () | 598439..606823 | - | 8385 | WP_106905068.1 | hypothetical protein | - |
| C6W69_RS03370 () | 606892..608157 | - | 1266 | WP_106888990.1 | hypothetical protein | - |
| C6W69_RS03375 () | 608168..608419 | - | 252 | WP_106888991.1 | bacteriocin | - |
| C6W69_RS03380 () | 608429..608875 | - | 447 | WP_106888992.1 | hypothetical protein | - |
| C6W69_RS03385 () | 608878..609534 | - | 657 | WP_106888993.1 | hypothetical protein | - |
| C6W69_RS03390 () | 609627..610028 | - | 402 | WP_106888994.1 | hypothetical protein | - |
| C6W69_RS03395 () | 610085..610225 | - | 141 | WP_106888995.1 | Hok/Gef family protein | - |
| C6W69_RS03405 () | 610458..611189 | - | 732 | WP_106888996.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| C6W69_RS03410 () | 611276..611893 | - | 618 | WP_106888997.1 | hypothetical protein | - |
| C6W69_RS03415 () | 611897..612178 | - | 282 | WP_106888998.1 | hypothetical protein | - |
| C6W69_RS03420 () | 612193..613461 | - | 1269 | WP_106888999.1 | host specificity protein J | - |
| C6W69_RS03425 () | 613458..615083 | - | 1626 | WP_106889000.1 | hypothetical protein | - |
| C6W69_RS03430 () | 615162..615833 | - | 672 | WP_052901188.1 | DUF4376 domain-containing protein | - |
| C6W69_RS03435 () | 615902..617683 | - | 1782 | WP_000118000.1 | carboxypeptidase regulatory-like domain-containing protein | - |
| C6W69_RS03440 () | 617680..618330 | - | 651 | WP_106889001.1 | hypothetical protein | - |
| C6W69_RS03445 () | 618330..618893 | - | 564 | WP_000829201.1 | hypothetical protein | - |
| C6W69_RS03450 () | 618877..619338 | - | 462 | WP_047081823.1 | hypothetical protein | - |
| C6W69_RS03455 () | 619389..619778 | - | 390 | WP_001140440.1 | hypothetical protein | - |
| C6W69_RS03460 () | 619833..621047 | - | 1215 | WP_000214467.1 | N4-gp56 family major capsid protein | - |
| C6W69_RS03465 () | 621071..622078 | - | 1008 | WP_047091030.1 | hypothetical protein | - |
| C6W69_RS03470 () | 622236..624380 | - | 2145 | WP_106888966.1 | portal protein | - |
| C6W69_RS03475 () | 624380..626086 | - | 1707 | WP_000143994.1 | terminase | - |
| C6W69_RS03480 () | 626067..626873 | - | 807 | WP_106888965.1 | terminase | - |
| C6W69_RS03485 () | 627397..627939 | - | 543 | WP_001109015.1 | Rha family transcriptional regulator | - |
| C6W69_RS03490 () | 628142..628579 | - | 438 | WP_001385819.1 | lysis protein | - |
| C6W69_RS26455 () | 628587..628736 | - | 150 | WP_000455400.1 | hypothetical protein | - |
| C6W69_RS03495 () | 628736..629308 | - | 573 | Protein_653 | hypothetical protein | - |
| C6W69_RS03500 () | 629581..630114 | - | 534 | WP_000087453.1 | lysozyme | - |
| C6W69_RS03505 () | 630119..630334 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| C6W69_RS03510 () | 630412..630657 | - | 246 | WP_106888964.1 | DUF826 domain-containing protein | - |
| C6W69_RS03515 () | 630698..630877 | - | 180 | WP_000143459.1 | DUF1378 family protein | - |
| C6W69_RS03520 () | 631013..632953 | - | 1941 | WP_106888963.1 | SASA family carbohydrate esterase | - |
| C6W69_RS03530 () | 633446..633715 | - | 270 | WP_000752026.1 | Shiga toxin Stx1a subunit B | - |
| C6W69_RS03535 () | 633725..634672 | - | 948 | WP_000691354.1 | Shiga toxin Stx1 subunit A | - |
| C6W69_RS03550 () | 635248..635841 | - | 594 | WP_106888961.1 | hypothetical protein | - |
| C6W69_RS03555 () | 635973..636353 | - | 381 | WP_001204882.1 | antitermination protein | - |
| C6W69_RS03560 () | 636346..636540 | - | 195 | WP_000992060.1 | protein ninH | - |
| C6W69_RS03565 () | 636540..636902 | - | 363 | WP_050866487.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6W69_RS03570 () | 636899..637189 | - | 291 | WP_050866488.1 | DUF1364 domain-containing protein | - |
| C6W69_RS03575 () | 637213..637404 | - | 192 | WP_001254268.1 | NinE family protein | - |
| C6W69_RS03580 () | 637401..637811 | - | 411 | WP_047199906.1 | recombination protein NinB | - |
| C6W69_RS03585 () | 637866..638534 | - | 669 | WP_047199905.1 | ORF6N domain-containing protein | - |
| C6W69_RS03590 () | 638879..639253 | + | 375 | WP_001624512.1 | DUF805 domain-containing protein | - |
| C6W69_RS03595 () | 639273..639944 | - | 672 | WP_001624511.1 | hypothetical protein | - |
| C6W69_RS03600 () | 639956..640381 | - | 426 | WP_106905069.1 | hypothetical protein | - |
| C6W69_RS03605 () | 640610..640939 | + | 330 | WP_001624509.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6W69_RS03610 () | 640929..641237 | + | 309 | WP_047199903.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| C6W69_RS03615 () | 641292..641537 | - | 246 | WP_050866385.1 | hypothetical protein | - |
| C6W69_RS03620 () | 641536..642210 | + | 675 | WP_000060692.1 | DUF4145 domain-containing protein | - |
| C6W69_RS03625 () | 642243..642674 | - | 432 | WP_001151119.1 | DUF977 family protein | - |
| C6W69_RS03630 () | 642689..643459 | - | 771 | WP_000450880.1 | DUF1627 domain-containing protein | - |
| C6W69_RS03635 () | 643485..644225 | - | 741 | Protein_678 | ATP-binding protein | - |
| C6W69_RS26460 () | 644232..645233 | - | 1002 | WP_072098131.1 | DNA-binding protein | - |
| C6W69_RS03640 () | 645335..645553 | - | 219 | WP_000438870.1 | hypothetical protein | - |
| C6W69_RS03645 () | 645568..645864 | - | 297 | WP_000084292.1 | hypothetical protein | - |
| C6W69_RS03650 () | 646008..646235 | - | 228 | WP_001068241.1 | hypothetical protein | - |
| C6W69_RS03655 () | 646320..647090 | + | 771 | WP_000239215.1 | helix-turn-helix transcriptional regulator | - |
| C6W69_RS03660 () | 647333..647507 | + | 175 | Protein_684 | hypothetical protein | - |
| C6W69_RS03665 () | 647485..647757 | + | 273 | WP_000088198.1 | hypothetical protein | - |
| C6W69_RS03670 () | 647761..648474 | + | 714 | WP_000211195.1 | hypothetical protein | - |
| C6W69_RS03675 () | 648506..648862 | + | 357 | WP_001005965.1 | hypothetical protein | - |
| C6W69_RS03680 () | 649194..649409 | + | 216 | WP_000560215.1 | cell division protein FtsZ | - |
| C6W69_RS03685 () | 649500..649886 | + | 387 | WP_000660960.1 | hypothetical protein | - |
| C6W69_RS03690 () | 649995..652043 | + | 2049 | WP_001271581.1 | exodeoxyribonuclease VIII | - |
| C6W69_RS03695 () | 652040..652336 | + | 297 | WP_000995035.1 | host-nuclease inhibitor Gam family protein | - |
| C6W69_RS03700 () | 652342..653127 | + | 786 | WP_000100858.1 | phage recombination protein Bet | - |
| C6W69_RS03705 () | 653124..653804 | + | 681 | WP_000187058.1 | YqaJ viral recombinase family protein | - |
| C6W69_RS03710 () | 653852..654103 | + | 252 | WP_000497813.1 | DUF4222 domain-containing protein | - |
| C6W69_RS03720 () | 654365..655528 | + | 1164 | WP_106905070.1 | site-specific integrase | - |
| C6W69_RS03725 () | 655578..656120 | + | 543 | Protein_696 | dimethylsulfoxide reductase subunit B | - |
| C6W69_RS03730 () | 656122..656976 | + | 855 | WP_001599925.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C6W69_RS03735 () | 657019..657633 | + | 615 | WP_106905072.1 | Tat proofreading chaperone DmsD | - |
| C6W69_RS03740 () | 657791..659083 | + | 1293 | WP_106905449.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C6W69_RS03745 () | 659036..659731 | - | 696 | WP_106905073.1 | dethiobiotin synthase | - |
| C6W69_RS03750 () | 659856..661076 | - | 1221 | WP_000225257.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|