MGE detailed information
MGE type: Genomic_island MGE length: 39167 bp
Accession: NZ_CP027437 Location: 1931390..1970556 Organism: Escherichia coli strain 2012C-4221 Replicon: chromosome
Accession: NZ_CP027437 Location: 1931390..1970556 Organism: Escherichia coli strain 2012C-4221 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6W65_RS09970 () | 1926632..1927369 | + | 738 | Protein_1835 | aldo/keto reductase | - |
| C6W65_RS09975 () | 1927556..1928509 | + | 954 | WP_106906272.1 | IS110 family transposase | - |
| C6W65_RS26800 () | 1928513..1928650 | + | 138 | WP_158709048.1 | hypothetical protein | - |
| C6W65_RS09980 () | 1928653..1930632 | + | 1980 | WP_106906273.1 | replication endonuclease | - |
| C6W65_RS09985 () | 1930655..1931071 | + | 417 | WP_106906935.1 | hypothetical protein | - |
| C6W65_RS26805 () | 1931213..1931386 | + | 174 | WP_158709049.1 | hypothetical protein | - |
| C6W65_RS09990 () | 1931390..1931686 | + | 297 | WP_106906274.1 | hypothetical protein | - |
| C6W65_RS09995 () | 1931754..1933817 | + | 2064 | WP_106906275.1 | hypothetical protein | - |
| C6W65_RS10000 () | 1933830..1934195 | + | 366 | WP_158709050.1 | hypothetical protein | - |
| C6W65_RS10005 () | 1934288..1935601 | + | 1314 | WP_106906277.1 | hypothetical protein | - |
| C6W65_RS10010 () | 1935821..1937098 | + | 1278 | WP_106906936.1 | type II and III secretion system | - |
| C6W65_RS10015 () | 1937274..1937514 | - | 241 | Protein_1846 | hypothetical protein | - |
| C6W65_RS10025 () | 1937772..1938023 | + | 252 | Protein_1847 | aldo/keto reductase | - |
| C6W65_RS10030 () | 1938054..1938947 | - | 894 | WP_122990194.1 | HTH-type transcriptional regulator PgrR | VF |
| C6W65_RS10035 () | 1939307..1939550 | + | 244 | Protein_1849 | NADH:flavin oxidoreductase | - |
| C6W65_RS10040 () | 1940030..1940131 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| C6W65_RS10050 () | 1940490..1940753 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| C6W65_RS10055 () | 1940753..1940893 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| C6W65_RS10060 () | 1940963..1941153 | - | 191 | Protein_1853 | hypothetical protein | - |
| C6W65_RS10075 () | 1941977..1942519 | + | 543 | WP_001305433.1 | HTH-type transcriptional regulator EcpR | VF |
| C6W65_RS10080 () | 1942594..1943181 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| C6W65_RS10085 () | 1943238..1943906 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| C6W65_RS10090 () | 1943932..1946457 | + | 2526 | WP_106906278.1 | putative outer membrane usher protein EcpC | VF |
| C6W65_RS10095 () | 1946447..1948090 | + | 1644 | WP_001314501.1 | Fimbria adhesin EcpD | VF |
| C6W65_RS10100 () | 1948059..1948769 | + | 711 | WP_001389966.1 | putative fimbrial chaperone EcpE | VF |
| C6W65_RS10105 () | 1949083..1949412 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| C6W65_RS10115 () | 1949661..1950275 | - | 615 | WP_001019920.1 | YagU family protein | - |
| C6W65_RS10120 () | 1950682..1951371 | + | 690 | WP_000070676.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| C6W65_RS10125 () | 1951368..1952324 | + | 957 | WP_106906279.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| C6W65_RS10130 () | 1952321..1954519 | + | 2199 | WP_106906280.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| C6W65_RS10135 () | 1954529..1955485 | + | 957 | WP_106906281.1 | molybdenum cofactor insertion chaperone PaoD | - |
| C6W65_RS10140 () | 1955665..1956792 | - | 1128 | WP_158709083.1 | MFS transporter | - |
| C6W65_RS10145 () | 1956934..1957992 | - | 1059 | WP_143365115.1 | alpha/beta hydrolase | - |
| C6W65_RS10150 () | 1958257..1959141 | + | 885 | WP_106906284.1 | HTH-type transcriptional regulator PgrR | VF |
| C6W65_RS10160 () | 1959823..1960101 | - | 279 | WP_072648672.1 | hypothetical protein | - |
| C6W65_RS10165 () | 1960269..1960820 | - | 552 | Protein_1870 | putative oxidoreductase | VF |
| C6W65_RS10170 () | 1960833..1960991 | + | 159 | Protein_1871 | integrase | - |
| C6W65_RS10180 () | 1961196..1962449 | - | 1254 | WP_000893268.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C6W65_RS10185 () | 1962461..1963564 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C6W65_RS10190 () | 1963852..1964907 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| C6W65_RS10195 () | 1964946..1965347 | - | 402 | WP_000174681.1 | sigma factor-binding protein Crl | - |
| C6W65_RS10200 () | 1965405..1966649 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1966065..1966145 | - | 81 | NuclAT_7 | - | - |
| - () | 1966065..1966145 | - | 81 | NuclAT_7 | - | - |
| - () | 1966065..1966145 | - | 81 | NuclAT_7 | - | - |
| - () | 1966065..1966145 | - | 81 | NuclAT_7 | - | - |
| C6W65_RS10205 () | 1966741..1967199 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C6W65_RS10210 () | 1967460..1968917 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| C6W65_RS10215 () | 1968974..1969363 | - | 390 | Protein_1879 | peptide chain release factor H | - |
| C6W65_RS10220 () | 1969400..1969852 | - | 453 | WP_059342012.1 | GNAT family N-acetyltransferase | - |
| C6W65_RS10225 () | 1969862..1970260 | - | 399 | WP_001521903.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C6W65_RS10230 () | 1970263..1970556 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C6W65_RS10235 () | 1970608..1971663 | - | 1056 | WP_034173577.1 | DNA polymerase IV | - |
| C6W65_RS10240 () | 1971734..1972519 | - | 786 | WP_199851529.1 | putative lateral flagellar export/assembly protein LafU | - |
| C6W65_RS10245 () | 1972491..1974203 | + | 1713 | Protein_1885 | flagellar biosynthesis protein FlhA | - |
| C6W65_RS10250 () | 1974365..1975114 | - | 750 | WP_158709051.1 | C40 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|