MGE detailed information
MGE type: Prophage MGE length: 32590 bp
Accession: NZ_CP027435 Location: 4513195..4545784 Organism: Escherichia coli strain 2014C-3599 Replicon: chromosome
Accession: NZ_CP027435 Location: 4513195..4545784 Organism: Escherichia coli strain 2014C-3599 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND02_RS23850 () | 4509357..4510613 | + | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
| ND02_RS23855 () | 4510662..4512797 | - | 2136 | WP_001370231.1 | ornithine decarboxylase | - |
| ND02_RS29905 () | 4512959..4513042 | - | 84 | WP_212591416.1 | hypothetical protein | - |
| ND02_RS23865 () | 4513195..4513902 | + | 708 | WP_000234502.1 | DUF554 domain-containing protein | - |
| ND02_RS23875 () | 4514281..4515546 | + | 1266 | WP_001218841.1 | Prophage integrase IntS ; Integrase | Integrase |
| ND02_RS23880 () | 4515663..4517201 | - | 1539 | WP_000997985.1 | IS66 family transposase ISEc8 | Transposase |
| ND02_RS23885 () | 4517310..4517984 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| ND02_RS23890 () | 4517981..4518328 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| ND02_RS23895 () | 4518348..4519904 | + | 1557 | WP_001066419.1 | IS66 family transposase ISSfl3 | Transposase |
| ND02_RS23900 () | 4519933..4520175 | - | 243 | WP_096855415.1 | transposase | - |
| ND02_RS29590 () | 4520417..4520686 | + | 270 | Protein_4380 | transposase | - |
| ND02_RS29595 () | 4520691..4521157 | - | 467 | Protein_4381 | IS3 family transposase IS629 | Transposase |
| ND02_RS23910 () | 4521195..4521548 | + | 354 | Protein_4382 | IS256 family transposase ISEic2 | Transposase |
| ND02_RS23915 () | 4521680..4522105 | + | 426 | WP_000422707.1 | IS66 family transposase ISEc23 | Transposase |
| ND02_RS23920 () | 4522102..4522452 | + | 351 | WP_000624681.1 | IS66 family transposase ISEc47 | Transposase |
| ND02_RS23925 () | 4522530..4523727 | - | 1198 | Protein_4385 | IS3 family transposase | - |
| ND02_RS23930 () | 4523768..4523902 | + | 135 | Protein_4386 | hypothetical protein | - |
| ND02_RS23935 () | 4523971..4524192 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| ND02_RS23940 () | 4524355..4524729 | + | 375 | WP_024174207.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| ND02_RS23945 () | 4524776..4525153 | + | 378 | WP_000854916.1 | TA system toxin CbtA family protein | Toxin Detail |
| ND02_RS23950 () | 4525150..4525638 | + | 489 | WP_000777666.1 | hypothetical protein | - |
| ND02_RS23955 () | 4525650..4525847 | + | 198 | WP_000839246.1 | DUF957 domain-containing protein | - |
| ND02_RS29775 () | 4525932..4526090 | + | 159 | WP_000014512.1 | hypothetical protein | - |
| ND02_RS23960 () | 4526108..4527664 | - | 1557 | WP_001066419.1 | IS66 family transposase ISSfl3 | Transposase |
| ND02_RS23965 () | 4527684..4528031 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| ND02_RS23970 () | 4528028..4528702 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| ND02_RS23975 () | 4528778..4529491 | + | 714 | Protein_4396 | DUF4942 domain-containing protein | - |
| ND02_RS23980 () | 4529780..4530993 | + | 1214 | WP_101329727.1 | IS3 family transposase IS1203 | Transposase |
| ND02_RS23990 () | 4532006..4533370 | - | 1365 | WP_000953521.1 | E3 ubiquitin-protein ligase SspH1 | VF |
| ND02_RS24000 () | 4533662..4534300 | - | 639 | WP_001145628.1 | hypothetical protein | VF |
| ND02_RS24005 () | 4534498..4535082 | + | 585 | WP_001111205.1 | hypothetical protein | VF |
| ND02_RS24010 () | 4535328..4536212 | - | 885 | WP_001368749.1 | Secreted effector protein EspF(U) | VF |
| ND02_RS24015 () | 4536428..4536706 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| ND02_RS24020 () | 4536712..4536933 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| ND02_RS24025 () | 4536970..4537377 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| ND02_RS24030 () | 4537384..4538328 | - | 945 | WP_001092013.1 | Protein EaeB | VF |
| ND02_RS24035 () | 4538349..4539491 | - | 1143 | WP_000935767.1 | hypothetical protein | VF |
| ND02_RS24040 () | 4539504..4540082 | - | 579 | WP_000381551.1 | Secreted effector protein SseB | VF |
| ND02_RS24045 () | 4540140..4541195 | - | 1056 | WP_001273456.1 | hypothetical protein | VF |
| ND02_RS24050 () | 4541338..4542558 | + | 1221 | WP_000953242.1 | hypothetical protein | VF |
| ND02_RS24055 () | 4542938..4545784 | - | 2847 | WP_000627900.1 | Intimin | VF |
| ND02_RS24060 () | 4545845..4546315 | - | 471 | WP_000098786.1 | type III secretion system LEE chaperone CesT | - |
| ND02_RS24065 () | 4546448..4548064 | - | 1617 | WP_001121326.1 | type III secretion system LEE translocated intimin receptor Tir | - |
| ND02_RS24070 () | 4548511..4549122 | - | 612 | WP_000492642.1 | hypothetical protein | - |
| ND02_RS24075 () | 4549373..4549732 | + | 360 | WP_001005228.1 | Tir chaperone family protein | - |
| ND02_RS24080 () | 4549951..4550466 | - | 516 | WP_071532567.1 | secretion protein EspH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|