MGE detailed information
MGE type: Prophage MGE length: 48242 bp
Accession: NZ_CP027435 Location: 2549427..2597668 Organism: Escherichia coli strain 2014C-3599 Replicon: chromosome
Accession: NZ_CP027435 Location: 2549427..2597668 Organism: Escherichia coli strain 2014C-3599 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND02_RS29860 () | 2545416..2545463 | + | 48 | WP_211180494.1 | protein YnaN | - |
| ND02_RS13560 () | 2545477..2546460 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| ND02_RS13565 () | 2546735..2546908 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| ND02_RS13570 () | 2546938..2548311 | + | 1374 | WP_000123758.1 | ATP-dependent RNA helicase DbpA | - |
| ND02_RS13575 () | 2548440..2549375 | - | 936 | WP_001157421.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| ND02_RS13580 () | 2549427..2550662 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| ND02_RS13585 () | 2550664..2550879 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| ND02_RS13590 () | 2550958..2551167 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2550983..2551161 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2550983..2551161 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2550983..2551161 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2550983..2551161 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| ND02_RS13595 () | 2551160..2551354 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| ND02_RS13600 () | 2551411..2552220 | - | 810 | WP_000595429.1 | recombination protein RecT | - |
| ND02_RS13605 () | 2552213..2554882 | - | 2670 | WP_000102191.1 | exodeoxyribonuclease VIII | - |
| ND02_RS13610 () | 2554963..2555139 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| ND02_RS13615 () | 2555133..2555354 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| ND02_RS13620 () | 2555779..2555931 | - | 153 | WP_001169149.1 | DUF1391 family protein | - |
| ND02_RS13630 () | 2556312..2556776 | - | 465 | WP_001253182.1 | helix-turn-helix domain-containing protein | - |
| ND02_RS13635 () | 2556881..2557156 | + | 276 | WP_000171139.1 | helix-turn-helix domain-containing protein | - |
| ND02_RS13640 () | 2557140..2557562 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| ND02_RS13645 () | 2557575..2558432 | + | 858 | WP_000899743.1 | DUF1376 domain-containing protein | - |
| ND02_RS13650 () | 2558439..2559185 | + | 747 | WP_000788989.1 | ATP-binding protein | - |
| ND02_RS13655 () | 2559207..2559968 | + | 762 | WP_001370676.1 | DUF1627 domain-containing protein | - |
| ND02_RS13660 () | 2559984..2560400 | + | 417 | WP_001151266.1 | DUF977 family protein | - |
| ND02_RS13665 () | 2560397..2560870 | + | 474 | WP_001275735.1 | class I SAM-dependent methyltransferase | - |
| ND02_RS13670 () | 2561193..2561771 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| ND02_RS13675 () | 2561731..2562828 | - | 1098 | WP_000156213.1 | beta family protein | - |
| ND02_RS13685 () | 2564647..2564802 | + | 156 | WP_000813257.1 | type I toxin-antitoxin system toxin HokD | - |
| ND02_RS13690 () | 2565014..2565193 | + | 180 | WP_000119356.1 | hypothetical protein | - |
| ND02_RS13695 () | 2565212..2565697 | + | 486 | WP_000818166.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| ND02_RS29705 () | 2565926..2566099 | + | 174 | WP_000687447.1 | hypothetical protein | - |
| ND02_RS13700 () | 2566159..2566758 | + | 600 | WP_000940340.1 | DUF1367 family protein | - |
| ND02_RS13705 () | 2566758..2567048 | + | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| ND02_RS13710 () | 2567045..2567599 | + | 555 | WP_000640170.1 | DUF1133 family protein | - |
| ND02_RS13720 () | 2567870..2568427 | + | 558 | Protein_2488 | ORF6N domain-containing protein | - |
| ND02_RS13735 () | 2569141..2571087 | + | 1947 | WP_106875738.1 | DUF1737 domain-containing protein | - |
| ND02_RS13740 () | 2571224..2571403 | + | 180 | WP_000142777.1 | DUF1378 family protein | - |
| ND02_RS13745 () | 2571444..2571689 | + | 246 | WP_001290233.1 | DUF826 domain-containing protein | - |
| ND02_RS13750 () | 2571766..2571981 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| ND02_RS13755 () | 2571986..2572519 | + | 534 | WP_000087730.1 | lysozyme | - |
| ND02_RS13760 () | 2572790..2573359 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| ND02_RS29380 () | 2573359..2573505 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| ND02_RS29390 () | 2573733..2573918 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| ND02_RS13775 () | 2574434..2574910 | + | 477 | WP_000348566.1 | DUF1441 family protein | - |
| ND02_RS13780 () | 2574907..2577030 | + | 2124 | WP_001077633.1 | phage terminase large subunit family protein | - |
| ND02_RS13785 () | 2577027..2577239 | + | 213 | WP_000102415.1 | hypothetical protein | - |
| ND02_RS13790 () | 2577239..2578741 | + | 1503 | WP_000974578.1 | phage portal protein | - |
| ND02_RS13795 () | 2578686..2580710 | + | 2025 | WP_001114424.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| ND02_RS13800 () | 2580798..2581124 | + | 327 | WP_024025855.1 | DUF2190 family protein | - |
| ND02_RS13805 () | 2581117..2581398 | + | 282 | WP_001281345.1 | DNA breaking-rejoining protein | - |
| ND02_RS13810 () | 2581401..2582024 | + | 624 | WP_000974955.1 | phage tail protein | - |
| ND02_RS13815 () | 2582037..2582435 | + | 399 | WP_000682719.1 | tail protein | - |
| ND02_RS13820 () | 2582443..2583195 | + | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| ND02_RS13825 () | 2583209..2583631 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| ND02_RS13830 () | 2583658..2584071 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| ND02_RS13835 () | 2584052..2586664 | + | 2613 | WP_032212711.1 | phage tail tape measure protein | - |
| ND02_RS13840 () | 2586661..2586990 | + | 330 | WP_000847298.1 | phage tail protein | - |
| ND02_RS13845 () | 2586990..2587688 | + | 699 | WP_032212713.1 | phage minor tail protein L | - |
| ND02_RS13850 () | 2587699..2588442 | + | 744 | WP_032212700.1 | C40 family peptidase | - |
| ND02_RS13855 () | 2588388..2589017 | + | 630 | WP_136865629.1 | tail assembly protein | - |
| ND02_RS13860 () | 2589258..2592731 | + | 3474 | WP_032212631.1 | host specificity protein J | - |
| ND02_RS13865 () | 2592799..2593398 | + | 600 | WP_001230471.1 | Outer membrane protein X | VF |
| ND02_RS13870 () | 2593463..2594776 | + | 1314 | WP_032212629.1 | ISNCY family transposase KIS | Transposase |
| ND02_RS13875 () | 2594778..2595047 | + | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| ND02_RS13885 () | 2595450..2596463 | + | 1014 | WP_122993102.1 | hypothetical protein | VF |
| ND02_RS13895 () | 2598523..2598957 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| ND02_RS13900 () | 2599098..2600231 | - | 1134 | WP_000837940.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|