MGE detailed information
MGE type: Prophage MGE length: 51760 bp
Accession: NZ_CP027430 Location: 1606609..1658368 Organism: Escherichia coli strain AS19-RrmA- Replicon: chromosome
Accession: NZ_CP027430 Location: 1606609..1658368 Organism: Escherichia coli strain AS19-RrmA- Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P57_RS08425 () | 1604213..1604938 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| C6P57_RS08430 () | 1604975..1605514 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| C6P57_RS08435 () | 1605579..1606127 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| C6P57_RS08445 () | 1606609..1607205 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| C6P57_RS23920 () | 1607683..1607817 | - | 135 | Protein_1538 | integrase | - |
| C6P57_RS08455 () | 1607873..1608570 | + | 698 | Protein_1539 | IS1 family transposase IS1R | Transposase |
| C6P57_RS08460 () | 1608579..1609061 | - | 483 | Protein_1540 | hypothetical protein | VF |
| C6P57_RS08475 () | 1610517..1611233 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C6P57_RS08480 () | 1611253..1612359 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| C6P57_RS08485 () | 1612424..1613404 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| C6P57_RS08490 () | 1613987..1615227 | - | 1241 | Protein_1544 | helicase YjhR | - |
| C6P57_RS08500 () | 1615343..1615588 | + | 246 | Protein_1545 | GNAT family N-acetyltransferase | - |
| C6P57_RS08510 () | 1615965..1616222 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| C6P57_RS08515 () | 1616234..1616779 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| C6P57_RS08520 () | 1616835..1617581 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| C6P57_RS08525 () | 1617750..1617968 | + | 219 | Protein_1549 | hypothetical protein | - |
| C6P57_RS24065 () | 1618006..1618122 | + | 117 | Protein_1550 | VOC family protein | - |
| C6P57_RS08530 () | 1618367..1619488 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| C6P57_RS08535 () | 1619485..1619763 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| C6P57_RS08540 () | 1619775..1621088 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| C6P57_RS08545 () | 1621101..1621907 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| C6P57_RS08550 () | 1622038..1622469 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| C6P57_RS08555 () | 1622481..1623113 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| C6P57_RS08560 () | 1623130..1623912 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| C6P57_RS08565 () | 1624102..1624799 | + | 698 | Protein_1558 | IS1 family transposase IS1R | Transposase |
| C6P57_RS08570 () | 1624882..1625139 | - | 258 | WP_000555341.1 | hypothetical protein | - |
| C6P57_RS08580 () | 1625478..1625582 | - | 105 | Protein_1560 | integrase core domain-containing protein | - |
| C6P57_RS08585 () | 1625815..1625880 | + | 66 | Protein_1561 | omptin family outer membrane protease | - |
| C6P57_RS08590 () | 1625900..1626597 | - | 698 | Protein_1562 | IS1 family transposase | - |
| C6P57_RS24170 () | 1626684..1626752 | - | 69 | WP_211180522.1 | protein YkiE | - |
| C6P57_RS08600 () | 1626889..1627410 | + | 522 | WP_001283626.1 | hypothetical protein | VF |
| C6P57_RS08605 () | 1627407..1628360 | + | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| C6P57_RS08610 () | 1628447..1630771 | + | 2325 | WP_000188262.1 | Fe(3+) dicitrate transport protein FecA | - |
| C6P57_RS08615 () | 1630816..1631718 | + | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| C6P57_RS08620 () | 1631715..1632713 | + | 999 | WP_000125187.1 | hypothetical protein | VF |
| C6P57_RS08625 () | 1632710..1633666 | + | 957 | WP_000684856.1 | hypothetical protein | VF |
| C6P57_RS08630 () | 1633667..1634434 | + | 768 | WP_000175457.1 | hypothetical protein | VF |
| C6P57_RS23925 () | 1634991..1635248 | - | 258 | WP_000177057.1 | hypothetical protein | - |
| C6P57_RS08640 () | 1635331..1636115 | - | 785 | Protein_1572 | IS3 family transposase ISEc52 | Transposase |
| C6P57_RS08645 () | 1636182..1637338 | + | 1157 | WP_085947616.1 | IS3 family transposase ISSd1 | Transposase |
| C6P57_RS08650 () | 1637492..1639489 | + | 1998 | WP_001293436.1 | choline BCCT transporter BetT | - |
| C6P57_RS08660 () | 1639552..1639965 | + | 414 | WP_000625671.1 | DUF2254 domain-containing protein | - |
| C6P57_RS08665 () | 1640814..1640815 | - | 2 | WP_085948656.1 | IS3 family transposase IS911 | Transposase |
| C6P57_RS23930 () | 1641155..1641391 | - | 237 | Protein_1577 | MFS transporter | - |
| C6P57_RS08675 () | 1641381..1641638 | + | 258 | WP_000254999.1 | hypothetical protein | - |
| C6P57_RS08680 () | 1641691..1641816 | - | 126 | WP_000594405.1 | hypothetical protein | - |
| C6P57_RS08685 () | 1641859..1642977 | - | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| C6P57_RS08690 () | 1642989..1644206 | - | 1218 | WP_000179691.1 | MFS transporter | - |
| C6P57_RS08695 () | 1644815..1646161 | + | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| C6P57_RS08705 () | 1646675..1646904 | - | 230 | Protein_1583 | transposase domain-containing protein | - |
| C6P57_RS08725 () | 1647491..1648671 | + | 1181 | Protein_1584 | phosphoethanolamine transferase | - |
| C6P57_RS08730 () | 1648988..1650253 | - | 1266 | Protein_1585 | hypothetical protein ; Integrase | Integrase |
| C6P57_RS08745 () | 1650719..1651738 | + | 1020 | WP_001318460.1 | NADPH-dependent aldehyde reductase Ahr | - |
| C6P57_RS08750 () | 1651742..1652305 | - | 564 | WP_000896738.1 | gluconokinase | - |
| C6P57_RS08755 () | 1652522..1653553 | + | 1032 | WP_001197411.1 | L-idonate 5-dehydrogenase | - |
| C6P57_RS08760 () | 1653577..1654341 | + | 765 | WP_000998695.1 | hypothetical protein | VF |
| C6P57_RS08765 () | 1654404..1655723 | + | 1320 | WP_001128347.1 | gnt-II system L-idonate transporter | - |
| C6P57_RS08770 () | 1655790..1656788 | + | 999 | WP_001309159.1 | DNA-binding transcriptional regulator IdnR | - |
| C6P57_RS08775 () | 1656866..1658368 | + | 1503 | WP_001294573.1 | DUF853 domain-containing protein | - |
| C6P57_RS08780 () | 1658529..1659611 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| C6P57_RS08785 () | 1659611..1660711 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| C6P57_RS24175 () | 1660774..1660824 | - | 51 | WP_211180521.1 | protein YtgA | - |
| C6P57_RS08790 () | 1660978..1662489 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| C6P57_RS08795 () | 1662843..1663286 | + | 444 | WP_000786393.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|