MGE detailed information
MGE type: Prophage MGE length: 39088 bp
Accession: NZ_CP027430 Location: 1237089..1276176 Organism: Escherichia coli strain AS19-RrmA- Replicon: chromosome
Accession: NZ_CP027430 Location: 1237089..1276176 Organism: Escherichia coli strain AS19-RrmA- Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P57_RS06585 () | 1232730..1233068 | + | 339 | Protein_1197 | LysR family transcriptional regulator | - |
| C6P57_RS06595 () | 1233385..1234638 | - | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C6P57_RS06600 () | 1234650..1235753 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C6P57_RS06605 () | 1236041..1237078 | + | 1038 | WP_000749880.1 | phosphoporin PhoE | - |
| C6P57_RS06610 () | 1237089..1237786 | - | 698 | Protein_1201 | IS1 family transposase IS1R | Transposase |
| C6P57_RS06620 () | 1237912..1238301 | - | 390 | WP_105929188.1 | sigma factor-binding protein Crl | - |
| C6P57_RS06625 () | 1238359..1239603 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 1239019..1239099 | - | 81 | NuclAT_11 | - | - |
| - () | 1239019..1239099 | - | 81 | NuclAT_11 | - | - |
| - () | 1239019..1239099 | - | 81 | NuclAT_11 | - | - |
| - () | 1239019..1239099 | - | 81 | NuclAT_11 | - | - |
| C6P57_RS06630 () | 1239695..1240153 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C6P57_RS06635 () | 1240414..1241871 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| C6P57_RS06640 () | 1241928..1242449 | - | 522 | Protein_1206 | peptide chain release factor H | - |
| C6P57_RS06645 () | 1242448..1242651 | - | 204 | Protein_1207 | RNA ligase RtcB family protein | - |
| C6P57_RS06650 () | 1242897..1243349 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| C6P57_RS06655 () | 1243359..1243757 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C6P57_RS06660 () | 1243760..1244053 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C6P57_RS06665 () | 1244105..1245160 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| C6P57_RS06670 () | 1245231..1246016 | - | 786 | WP_000207564.1 | hypothetical protein | VF |
| C6P57_RS06675 () | 1245988..1247700 | + | 1713 | Protein_1213 | hypothetical protein | VF |
| C6P57_RS06680 () | 1247916..1248413 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| C6P57_RS06685 () | 1248589..1249362 | - | 774 | WP_001353765.1 | hypothetical protein | VF |
| C6P57_RS06690 () | 1249548..1249808 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C6P57_RS06695 () | 1249811..1250089 | + | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C6P57_RS06700 () | 1250245..1250985 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C6P57_RS06705 () | 1250956..1251723 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| C6P57_RS06710 () | 1251929..1252507 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| C6P57_RS06715 () | 1252747..1255191 | + | 2445 | WP_000973107.1 | hypothetical protein | VF |
| C6P57_RS06720 () | 1255234..1255680 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| C6P57_RS06725 () | 1255861..1256631 | + | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| C6P57_RS06730 () | 1256672..1257808 | - | 1137 | WP_105929189.1 | ISAs1 family transposase ISEc1 | Transposase |
| C6P57_RS06735 () | 1258239..1258610 | - | 372 | WP_012777340.1 | hypothetical protein | - |
| C6P57_RS06740 () | 1258612..1259309 | - | 698 | Protein_1226 | IS1 family transposase IS1R | Transposase |
| C6P57_RS06750 () | 1259575..1260360 | - | 786 | WP_001053631.1 | hypothetical protein | - |
| C6P57_RS06765 () | 1260899..1261630 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| C6P57_RS06770 () | 1261695..1262162 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| C6P57_RS06775 () | 1262159..1262881 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| C6P57_RS06780 () | 1262915..1263670 | + | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| C6P57_RS06785 () | 1263742..1265100 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| C6P57_RS06790 () | 1265148..1265744 | - | 597 | Protein_1233 | methyltransferase domain-containing protein | - |
| C6P57_RS06795 () | 1265775..1266575 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| C6P57_RS06800 () | 1266816..1267730 | + | 915 | WP_000648577.1 | hypothetical protein | VF |
| C6P57_RS06805 () | 1267727..1268530 | - | 804 | WP_000997050.1 | 2,5-didehydrogluconate reductase DkgB | - |
| C6P57_RS06840 () | 1274385..1274957 | - | 573 | WP_001140174.1 | hypothetical protein | VF |
| C6P57_RS06845 () | 1275145..1276176 | + | 1032 | WP_000593994.1 | hypothetical protein | VF |
| C6P57_RS06850 () | 1276169..1276822 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| C6P57_RS06855 () | 1276862..1277677 | + | 816 | WP_000874224.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| C6P57_RS06860 () | 1277795..1278199 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| C6P57_RS06865 () | 1278196..1278903 | + | 708 | WP_000094031.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| C6P57_RS06870 () | 1279014..1280732 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|