MGE detailed information

MGE type: Conjugative plasmid        MGE length: 195881 bp
Accession: NZ_CP027425        Location: 1..195881         Organism: Klebsiella oxytoca strain FDAARGOS_335       Replicon: plasmid unnamed


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CEQ13_RS00005 () 17..295 - 279 WP_004152296.1 bacteriocin immunity protein -
CEQ13_RS00010 () 297..2618 - 2322 WP_004178051.1 klebicin B-related nuclease bacteriocin -
CEQ13_RS00015 () 2974..3519 + 546 WP_004178052.1 hypothetical protein -
CEQ13_RS00020 () 3734..4081 - 348 WP_004152301.1 hypothetical protein -
CEQ13_RS00025 () 4101..4697 - 597 WP_004178053.1 fertility inhibition protein FinO -
CEQ13_RS00030 () 4855..5580 - 726 WP_004152303.1 type-F conjugative transfer system pilin acetylase TraX -
CEQ13_RS00035 () 5660..10921 - 5262 WP_004153029.1 Multifunctional conjugation protein TraI Relaxase
CEQ13_RS00040 () 10921..13230 - 2310 Protein_7 type IV conjugative transfer system coupling protein TraD -
CEQ13_RS00045 () 13590..14321 - 732 WP_004152629.1 complement resistance protein TraT -
CEQ13_RS00050 () 14511..15038 - 528 WP_004153030.1 hypothetical protein -
CEQ13_RS00055 () 15044..17893 - 2850 WP_004178054.1 conjugal transfer mating pair stabilization protein TraG -
CEQ13_RS00060 () 17893..19263 - 1371 WP_004178055.1 conjugal transfer protein TraH -
CEQ13_RS00065 () 19250..19678 - 429 WP_004152689.1 hypothetical protein -
CEQ13_RS00070 () 19671..20243 - 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CEQ13_RS00075 () 20215..20454 - 240 WP_040220836.1 type-F conjugative transfer system pilin chaperone TraQ -
CEQ13_RS00080 () 20465..21217 - 753 WP_004152686.1 type-F conjugative transfer system pilin assembly protein TraF -
CEQ13_RS00085 () 21238..21564 - 327 WP_004152685.1 hypothetical protein -
CEQ13_RS00095 () 21792..22028 - 237 WP_004152683.1 conjugal transfer protein TrbE -
CEQ13_RS00100 () 22060..24015 - 1956 WP_004153093.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CEQ13_RS00105 () 24063..24701 - 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
CEQ13_RS00110 () 24714..25706 - 993 WP_004178057.1 conjugal transfer pilus assembly protein TraU -
CEQ13_RS00115 () 25717..26343 - 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
CEQ13_RS00120 () 26343..26732 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
CEQ13_RS00125 () 26732..29371 - 2640 WP_004152592.1 type IV secretion system protein TraC -
CEQ13_RS00130 () 29443..29841 - 399 WP_004153071.1 hypothetical protein -
CEQ13_RS00140 () 30137..30541 - 405 WP_023292152.1 hypothetical protein -
CEQ13_RS00145 () 30608..30925 - 318 WP_004152595.1 hypothetical protein -
CEQ13_RS00150 () 30926..31144 - 219 WP_004171484.1 hypothetical protein -
CEQ13_RS00155 () 31168..31458 - 291 WP_004152596.1 hypothetical protein -
CEQ13_RS00160 () 31463..31873 - 411 WP_004152597.1 lipase chaperone -
CEQ13_RS00165 () 32005..32574 - 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
CEQ13_RS00170 () 32597..33193 - 597 WP_004152599.1 conjugal transfer protein TraP -
CEQ13_RS00175 () 33186..34610 - 1425 WP_004152600.1 conjugal transfer protein TraB -
CEQ13_RS00180 () 34610..35350 - 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
CEQ13_RS00185 () 35337..35903 - 567 WP_004152602.1 type IV conjugative transfer system protein TraE -
CEQ13_RS00190 () 35923..36228 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
CEQ13_RS00195 () 36242..36610 - 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
CEQ13_RS00200 () 36664..37035 - 372 WP_004208838.1 TraY domain-containing protein -
CEQ13_RS00205 () 37119..37805 - 687 WP_011977735.1 transcriptional regulator TraJ family protein -
CEQ13_RS00210 () 38028..38420 - 393 WP_004178062.1 relaxosome protein TraM -
CEQ13_RS00215 () 38854..39339 + 486 WP_004178063.1 hypothetical protein VF
CEQ13_RS00220 () 39372..39701 - 330 WP_011977736.1 hypothetical protein -
CEQ13_RS00225 () 39734..40555 - 822 WP_004178064.1 DUF945 domain-containing protein -
CEQ13_RS00245 () 41389..41802 - 414 WP_004152722.1 helix-turn-helix domain-containing protein -
CEQ13_RS00250 () 41803..42081 - 279 WP_004152721.1 helix-turn-helix domain-containing protein -
CEQ13_RS00255 () 42071..42391 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
CEQ13_RS00260 () 42472..42696 - 225 WP_004152719.1 hypothetical protein -
CEQ13_RS00265 () 42707..42919 - 213 WP_004152718.1 hypothetical protein -
CEQ13_RS00270 () 42980..43336 - 357 WP_004152717.1 hypothetical protein -
CEQ13_RS00280 () 43972..44322 - 351 WP_004182068.1 hypothetical protein -
CEQ13_RS00285 () 44319..44591 - 273 WP_004182067.1 hypothetical protein -
CEQ13_RS00290 () 45287..45448 - 162 WP_004118124.1 type I toxin-antitoxin system Hok family toxin -
CEQ13_RS00300 () 45676..46050 - 375 WP_004182064.1 hypothetical protein -
CEQ13_RS00305 () 46106..46432 - 327 WP_004152639.1 hypothetical protein -
CEQ13_RS00310 () 46429..47157 - 729 WP_105889045.1 plasmid SOS inhibition protein A -
CEQ13_RS00315 () 47154..47585 - 432 WP_004182061.1 conjugation system SOS inhibitor PsiB -
CEQ13_RS00320 () 47630..49687 - 2058 WP_004182059.1 ParB/RepB/Spo0J family partition protein -
CEQ13_RS00325 () 49757..50005 - 249 WP_004182058.1 DUF905 domain-containing protein -
CEQ13_RS00330 () 50054..50596 - 543 WP_004182056.1 single-stranded DNA-binding protein -
CEQ13_RS00345 () 51431..51994 - 564 WP_004182054.1 methyltransferase -
CEQ13_RS00350 () 52042..53397 - 1356 WP_004182052.1 DUF3560 domain-containing protein -
CEQ13_RS00355 () 53449..53679 - 231 WP_001568051.1 hypothetical protein -
CEQ13_RS00360 () 53771..53998 - 228 WP_004182050.1 hypothetical protein -
CEQ13_RS00365 () 54725..55042 - 318 WP_004118473.1 hypothetical protein -
CEQ13_RS00370 () 55077..55331 - 255 WP_004152754.1 DNA polymerase III subunit theta -
CEQ13_RS00375 () 55568..55993 - 426 WP_004118478.1 antirestriction protein -
CEQ13_RS00385 () 56513..56743 - 231 WP_004118481.1 hypothetical protein -
CEQ13_RS00390 () 56977..58488 - 1512 WP_024623221.1 Group II intron-encoded protein LtrA VF
CEQ13_RS00400 () 58890..59315 + 426 WP_004182047.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CEQ13_RS00405 () 59315..60587 + 1273 Protein_69 Y-family DNA polymerase -
CEQ13_RS00410 () 60666..60917 + 252 WP_004182043.1 hypothetical protein -
CEQ13_RS00415 () 61162..63114 - 1953 WP_000037308.1 DUF262 domain-containing HNH endonuclease family protein -
CEQ13_RS00420 () 63111..64391 - 1281 WP_004182042.1 DUF262 domain-containing protein -
CEQ13_RS00435 () 65359..66054 + 696 Protein_73 IS1 family transposase -
CEQ13_RS00440 () 66832..67948 - 1117 Protein_74 IS3 family transposase ISSen4 Transposase
CEQ13_RS00450 () 68991..69962 - 972 WP_004182039.1 ParB/RepB/Spo0J family plasmid partition protein -
CEQ13_RS00455 () 69962..71128 - 1167 WP_004182032.1 Sporulation initiation inhibitor protein Soj VF
CEQ13_RS00460 () 71880..72890 + 1011 WP_004182030.1 RepB family plasmid replication initiator protein -
CEQ13_RS00465 () 73608..74348 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
CEQ13_RS00470 () 75492..76439 + 948 WP_004182028.1 sensor domain-containing diguanylate cyclase -
CEQ13_RS00475 () 76466..76777 - 312 WP_071527918.1 EAL domain-containing protein -
CEQ13_RS00485 () 76797..77765 + 969 WP_068814619.1 IS5 family transposase IS903B Transposase
CEQ13_RS00490 () 78438..78695 - 258 WP_004197688.1 hypothetical protein -
CEQ13_RS00495 () 79297..80529 + 1233 Protein_83 putative cyclic di-GMP phosphodiesterase PdeB VF
CEQ13_RS00500 () 80632..81663 + 1032 WP_004176137.1 IS630 family transposase ISEc33 Transposase
CEQ13_RS00505 () 81685..81906 + 222 Protein_85 EAL domain-containing protein -
CEQ13_RS00510 () 82889..84166 - 1278 WP_004152070.1 DUF2254 domain-containing protein -
CEQ13_RS00515 () 84229..86226 - 1998 WP_004178088.1 choline BCCT transporter BetT -
CEQ13_RS00520 () 86378..87075 - 698 Protein_88 IS1 family transposase IS1X2 Transposase
CEQ13_RS00535 () 88564..89048 + 485 Protein_90 IS1 family transposase IS1X2 Transposase
CEQ13_RS00540 () 89064..89606 + 543 Protein_91 ISL3 family transposase ISKpn25 Transposase
CEQ13_RS00545 () 89902..90333 - 432 WP_004178091.1 silver-binding protein SilE -
CEQ13_RS00550 () 90584..92059 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
CEQ13_RS00555 () 92052..92732 - 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
CEQ13_RS00560 () 92922..94307 + 1386 WP_000475512.1 Cation efflux system protein CusC VF
CEQ13_RS00565 () 94336..94689 + 354 WP_001246153.1 cation efflux system protein CusF -
CEQ13_RS00570 () 94803..96095 + 1293 WP_004098959.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
CEQ13_RS00575 () 96106..99252 + 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
CEQ13_RS00580 () 99339..99779 + 441 WP_000758228.1 hypothetical protein -
CEQ13_RS00585 () 99906..102353 + 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
CEQ13_RS00590 () 102394..102591 + 198 WP_000843497.1 DUF2933 domain-containing protein -
CEQ13_RS00595 () 102625..103362 - 738 WP_004182013.1 Murein DD-endopeptidase MepM VF
CEQ13_RS00600 () 103651..104100 - 450 WP_001023257.1 copper resistance protein -
CEQ13_RS00605 () 104334..106151 + 1818 WP_000925242.1 multicopper oxidase PcoA -
CEQ13_RS00610 () 106157..107047 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
CEQ13_RS00615 () 107087..107467 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
CEQ13_RS00620 () 107472..108401 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
CEQ13_RS00625 () 108456..109136 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
CEQ13_RS00630 () 109133..110533 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
CEQ13_RS00635 () 110750..111184 + 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
CEQ13_RS00640 () 111416..111595 - 180 WP_024623170.1 type II toxin-antitoxin system RelE/ParE family toxin -
CEQ13_RS00645 () 111656..113276 - 1621 Protein_112 ISL3 family transposase ISEc38 Transposase
CEQ13_RS00650 () 113338..113847 + 510 WP_004196769.1 aquaporin -
CEQ13_RS00655 () 113897..114394 - 498 WP_004196778.1 GNAT family N-acetyltransferase -
CEQ13_RS00660 () 114726..115052 + 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
CEQ13_RS00665 () 115049..115762 + 714 WP_004182006.1 arsenical resistance protein ArsH -
CEQ13_RS00670 () 115771..116316 + 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
CEQ13_RS00675 () 116392..116754 + 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
CEQ13_RS00680 () 116779..118529 + 1751 Protein_119 arsenical pump-driving ATPase -
CEQ13_RS00685 () 118651..119187 + 537 WP_004152096.1 GNAT family N-acetyltransferase -
CEQ13_RS00690 () 119220..119645 - 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
CEQ13_RS00695 () 119658..120947 - 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
CEQ13_RS00700 () 120995..122746 - 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
CEQ13_RS00705 () 122764..123126 - 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
CEQ13_RS00710 () 123176..123526 - 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
CEQ13_RS00715 () 123884..124153 + 270 WP_004152102.1 hypothetical protein -
CEQ13_RS00720 () 124141..124716 + 576 WP_004152103.1 hypothetical protein -
CEQ13_RS00725 () 124747..125241 + 495 WP_004152104.1 DNA-binding protein -
CEQ13_RS00730 () 125285..125653 + 369 WP_004152105.1 hypothetical protein -
CEQ13_RS00735 () 125687..125890 + 204 WP_004152106.1 hemolysin expression modulator Hha -
CEQ13_RS00740 () 125939..126196 + 258 WP_004152107.1 hypothetical protein -
CEQ13_RS00745 () 126272..126526 + 255 WP_004152108.1 hypothetical protein -
CEQ13_RS00750 () 126702..126968 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
CEQ13_RS00755 () 126956..127438 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
CEQ13_RS00760 () 127597..128851 - 1255 Protein_135 IS3 family transposase ISKpn38 Transposase
CEQ13_RS00765 () 128939..129901 - 963 WP_004152113.1 M48 family metalloprotease -
CEQ13_RS00770 () 129888..130637 - 750 WP_009483782.1 phosphate-starvation-inducible PsiE family protein -
CEQ13_RS00780 () 130875..131072 - 198 WP_004152115.1 hypothetical protein -
CEQ13_RS00785 () 131072..133867 - 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
CEQ13_RS00790 () 133991..134560 - 570 WP_004181999.1 Spore protein SP21 VF
CEQ13_RS00795 () 134595..134876 - 282 WP_004152118.1 helix-turn-helix domain-containing protein -
CEQ13_RS29145 () 135120..135383 - 264 WP_004118208.1 hypothetical protein -
CEQ13_RS29150 () 135398..135661 + 264 WP_004118209.1 transposase -
CEQ13_RS00805 () 135606..135722 + 117 Protein_144 transposase domain-containing protein -
CEQ13_RS00810 () 135907..136604 + 698 Protein_145 IS1 family transposase IS1X2 Transposase
CEQ13_RS00815 () 136812..137819 - 1008 WP_004181997.1 formamidase -
CEQ13_RS00820 () 137855..138544 - 690 WP_004181996.1 urea ABC transporter ATP-binding subunit UrtE -
CEQ13_RS00825 () 138555..139304 - 750 WP_004181995.1 urea ABC transporter ATP-binding protein UrtD -
CEQ13_RS00830 () 139301..140416 - 1116 WP_004181994.1 urea ABC transporter permease subunit UrtC -
CEQ13_RS00835 () 140426..141352 - 927 WP_004181993.1 urea ABC transporter permease subunit UrtB -
CEQ13_RS00840 () 141409..142599 - 1191 WP_004197507.1 urea ABC transporter substrate-binding protein -
CEQ13_RS00845 () 142904..146284 + 3381 WP_004181991.1 Aerobic respiration control sensor protein ArcB VF
CEQ13_RS00850 () 146247..147167 + 921 WP_004181990.1 putative cyclic di-GMP phosphodiesterase VF
CEQ13_RS00855 () 147219..147683 + 465 Protein_154 IS91 family transposase IS1294 Transposase
CEQ13_RS00860 () 147727..148107 - 381 Protein_155 transposase family protein -
CEQ13_RS00865 () 148164..149132 - 969 WP_072143344.1 IS5 family transposase IS903B Transposase
CEQ13_RS00870 () 149301..149802 - 502 Protein_157 DUF2913 family protein -
CEQ13_RS00885 () 150422..150867 - 446 Protein_158 creatininase family protein -
CEQ13_RS00890 () 151043..152776 - 1734 WP_004118832.1 Glutathione import ATP-binding protein GsiA VF
CEQ13_RS00895 () 152784..153731 - 948 WP_004118225.1 acetamidase/formamidase family protein -
CEQ13_RS00900 () 153776..155380 - 1605 WP_004152278.1 ABC transporter substrate-binding protein -
CEQ13_RS00905 () 155393..156313 - 921 WP_004118227.1 ABC transporter permease -
CEQ13_RS00910 () 156313..157161 - 849 WP_004118228.1 ABC transporter permease -
CEQ13_RS00915 () 157158..157751 - 594 WP_004118229.1 ANTAR domain-containing protein -
CEQ13_RS00920 () 157748..158875 - 1128 WP_004118840.1 transporter substrate-binding protein -
CEQ13_RS00925 () 159160..159327 - 168 WP_004118231.1 integrase -
CEQ13_RS29295 () 159256..159468 + 213 WP_162551856.1 hypothetical protein -
CEQ13_RS00930 () 159469..159954 + 486 Protein_168 IS21 family transposase ISEc62 Transposase
CEQ13_RS00940 () 160430..160951 + 522 WP_004197062.1 putative RNA polymerase sigma factor FecI VF
CEQ13_RS00945 () 160948..161901 + 954 WP_004197067.1 fec operon regulator FecR -
CEQ13_RS00950 () 161988..164312 + 2325 WP_004182128.1 Fe(3+) dicitrate transport protein FecA -
CEQ13_RS00955 () 164357..165259 + 903 WP_004182127.1 Fe(3+) dicitrate ABC transporter substrate-binding protein FecB -
CEQ13_RS00960 () 165256..166254 + 999 WP_004182126.1 Fe(3+) dicitrate transport system permease protein FecC VF
CEQ13_RS00965 () 166251..167207 + 957 WP_004118246.1 Fe(3+) dicitrate transport system permease protein FecD VF
CEQ13_RS00970 () 167208..167975 + 768 WP_004152282.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
CEQ13_RS00975 () 168074..168367 + 294 WP_004118251.1 IS66 family transposase ISKpn24 Transposase
CEQ13_RS00980 () 168442..168669 + 228 Protein_177 IS66 family transposase -
CEQ13_RS00985 () 168698..168985 - 288 WP_165765869.1 EAL domain-containing protein -
CEQ13_RS00990 () 169319..170329 - 1011 WP_004152284.1 zinc-binding alcohol dehydrogenase family protein -
CEQ13_RS01000 () 170790..171872 + 1083 WP_016831235.1 DNA-binding transcriptional repressor LacI -
CEQ13_RS01005 () 171994..175068 + 3075 WP_004182121.1 beta-galactosidase -
CEQ13_RS01010 () 175120..176373 + 1254 WP_004182120.1 lactose permease -
CEQ13_RS01020 () 176465..177434 + 970 Protein_183 IS5 family transposase IS903B Transposase
CEQ13_RS01025 () 178079..180388 + 2310 WP_004152290.1 TerB N-terminal domain-containing protein -
CEQ13_RS01030 () 180392..181708 + 1317 WP_004152291.1 ATP-binding protein -
CEQ13_RS01035 () 181705..183900 + 2196 WP_000093087.1 DEAD/DEAH box helicase -
CEQ13_RS01050 () 185144..188116 - 2973 WP_001138073.1 Tn3 family transposase TnpA_TnAs3 Transposase
CEQ13_RS01055 () 188119..188676 - 558 WP_001162012.1 Tn3 family transposase TnpR_TnAs2 Transposase
CEQ13_RS01065 () 188806..189018 - 213 WP_000993245.1 DUF3330 domain-containing protein -
CEQ13_RS01075 () 189084..189320 - 237 WP_001087807.1 broad-spectrum mercury transporter MerE -
CEQ13_RS01080 () 189317..189682 - 366 WP_001277466.1 mercury resistance co-regulator MerD -
CEQ13_RS01085 () 189700..191385 - 1686 WP_000209296.1 mercury(II) reductase -
CEQ13_RS01090 () 191424..191849 - 426 WP_000522996.1 organomercurial transporter MerC -
CEQ13_RS01095 () 191877..192152 - 276 WP_000732275.1 mercury resistance system periplasmic binding protein MerP -
CEQ13_RS01100 () 192168..192533 - 366 WP_004200999.1 mercuric ion transporter MerT -
CEQ13_RS01105 () 192605..193060 + 456 WP_001166628.1 IS607 family transposase ISChh1 Transposase
CEQ13_RS01110 () 193335..194192 - 858 WP_004152292.1 incFII family plasmid replication initiator RepA -
CEQ13_RS01115 () 194185..194262 - 78 WP_004171457.1 RepA leader peptide Tap -
CEQ13_RS01120 () 194479..194757 - 279 WP_004199332.1 replication regulatory protein RepA -
CEQ13_RS01125 () 195078..195557 - 480 WP_009485932.1 Phospholipase D VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance