MGE detailed information
MGE type: Prophage MGE length: 40958 bp
Accession: NZ_CP027397 Location: 1273148..1314105 Organism: Yersinia intermedia strain FDAARGOS_358 Replicon: chromosome
Accession: NZ_CP027397 Location: 1273148..1314105 Organism: Yersinia intermedia strain FDAARGOS_358 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ36_RS05895 () | 1268495..1268719 | + | 225 | WP_005189477.1 | DUF2594 family protein | - |
| CEQ36_RS05900 () | 1268831..1269169 | + | 339 | WP_050297572.1 | GlpM family protein | - |
| CEQ36_RS05905 () | 1269187..1269441 | - | 255 | WP_005189472.1 | hypothetical protein | - |
| CEQ36_RS05910 () | 1269842..1271413 | + | 1572 | WP_032907171.1 | MCP four helix bundle domain-containing protein | - |
| CEQ36_RS05915 () | 1271516..1273003 | - | 1488 | WP_050089643.1 | alpha-amylase | - |
| CEQ36_RS05920 () | 1273148..1273477 | + | 330 | WP_032907169.1 | DHCW motif cupin fold protein | - |
| CEQ36_RS05925 () | 1273558..1274055 | - | 498 | WP_005189458.1 | hypothetical protein | - |
| CEQ36_RS23390 () | 1274718..1274873 | + | 156 | WP_005189453.1 | hypothetical protein | - |
| CEQ36_RS05935 () | 1274896..1275087 | + | 192 | WP_032907168.1 | DUF1737 domain-containing protein | - |
| CEQ36_RS05940 () | 1275337..1276323 | + | 987 | WP_032907167.1 | sensor domain-containing diguanylate cyclase | - |
| CEQ36_RS05950 () | 1277595..1278206 | + | 612 | WP_080608262.1 | sce7726 family protein | - |
| CEQ36_RS05955 () | 1278201..1279238 | - | 1038 | WP_080608263.1 | beta family protein | - |
| CEQ36_RS05960 () | 1279238..1279780 | - | 543 | WP_080608264.1 | ImmA/IrrE family metallo-endopeptidase | - |
| CEQ36_RS05965 () | 1279781..1280281 | - | 501 | WP_080608492.1 | hypothetical protein | - |
| CEQ36_RS05970 () | 1280715..1281725 | - | 1011 | WP_080608265.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| CEQ36_RS05975 () | 1281735..1282322 | - | 588 | WP_080608266.1 | phage repressor protein CI | - |
| CEQ36_RS05980 () | 1282522..1282701 | + | 180 | WP_050134119.1 | hypothetical protein | - |
| CEQ36_RS05985 () | 1282729..1283250 | + | 522 | WP_105165845.1 | phage regulatory CII family protein | - |
| CEQ36_RS05990 () | 1283251..1283709 | - | 459 | WP_080608267.1 | hypothetical protein | - |
| CEQ36_RS23395 () | 1283911..1284087 | + | 177 | WP_176393549.1 | hypothetical protein | - |
| CEQ36_RS05995 () | 1284126..1284593 | + | 468 | WP_080608493.1 | replication protein B | - |
| CEQ36_RS06000 () | 1284667..1284912 | + | 246 | WP_192945372.1 | DUF2732 family protein | - |
| CEQ36_RS06005 () | 1284924..1285142 | + | 219 | WP_080608268.1 | TraR/DksA family transcriptional regulator | - |
| CEQ36_RS06010 () | 1285139..1287409 | + | 2271 | WP_080608269.1 | replication endonuclease | - |
| CEQ36_RS06015 () | 1287522..1287716 | + | 195 | WP_080608270.1 | hypothetical protein | - |
| CEQ36_RS06020 () | 1288172..1289041 | + | 870 | WP_080608271.1 | DUF559 domain-containing protein | - |
| CEQ36_RS06025 () | 1289359..1289613 | + | 255 | WP_050162496.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CEQ36_RS06030 () | 1289610..1289951 | + | 342 | WP_080608272.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CEQ36_RS06040 () | 1290753..1293716 | + | 2964 | WP_192945337.1 | NACHT domain-containing protein | - |
| CEQ36_RS06045 () | 1293795..1294814 | - | 1020 | WP_105165846.1 | phage portal protein | - |
| CEQ36_RS06050 () | 1294814..1296577 | - | 1764 | WP_080608274.1 | terminase ATPase subunit family protein | - |
| CEQ36_RS06055 () | 1296720..1297541 | + | 822 | WP_080608275.1 | GPO family capsid scaffolding protein | - |
| CEQ36_RS06060 () | 1297563..1298630 | + | 1068 | WP_080608276.1 | phage major capsid protein, P2 family | - |
| CEQ36_RS06065 () | 1298634..1299290 | + | 657 | WP_080608277.1 | terminase endonuclease subunit | - |
| CEQ36_RS06070 () | 1299380..1299886 | + | 507 | WP_080608278.1 | head completion/stabilization protein | - |
| CEQ36_RS06075 () | 1299886..1300089 | + | 204 | WP_080608279.1 | tail protein X | - |
| CEQ36_RS06080 () | 1300080..1300301 | + | 222 | WP_080608280.1 | primosomal protein | - |
| CEQ36_RS06085 () | 1300285..1300794 | + | 510 | WP_080608281.1 | lysozyme | - |
| CEQ36_RS06090 () | 1300791..1301216 | + | 426 | WP_080608282.1 | Rz-like lysis system protein LysB | - |
| CEQ36_RS06095 () | 1301104..1301349 | + | 246 | WP_080608283.1 | Rz1-like lysis system protein LysC | - |
| CEQ36_RS06100 () | 1301312..1301779 | + | 468 | WP_080608284.1 | phage tail protein | - |
| CEQ36_RS06105 () | 1301772..1302218 | + | 447 | WP_080608285.1 | phage virion morphogenesis protein | - |
| CEQ36_RS06110 () | 1302252..1302917 | - | 666 | WP_080608286.1 | hypothetical protein | - |
| CEQ36_RS06115 () | 1303035..1303670 | + | 636 | WP_080608287.1 | phage baseplate assembly protein V | - |
| CEQ36_RS06120 () | 1303667..1304014 | + | 348 | WP_080608288.1 | GPW/gp25 family protein | - |
| CEQ36_RS06125 () | 1304019..1304927 | + | 909 | WP_080608289.1 | baseplate assembly protein | - |
| CEQ36_RS06130 () | 1304920..1305525 | + | 606 | WP_050162476.1 | phage tail protein I | - |
| CEQ36_RS06135 () | 1305530..1306804 | + | 1275 | WP_080608290.1 | phage tail protein | - |
| CEQ36_RS06140 () | 1306807..1307385 | + | 579 | WP_080608291.1 | tail fiber assembly protein | - |
| CEQ36_RS06145 () | 1307515..1308705 | + | 1191 | WP_080608292.1 | phage tail sheath protein | - |
| CEQ36_RS06150 () | 1308718..1309236 | + | 519 | WP_080608293.1 | phage major tail tube protein | - |
| CEQ36_RS06155 () | 1309297..1309578 | + | 282 | WP_080608294.1 | phage tail assembly protein | - |
| CEQ36_RS06160 () | 1309611..1309730 | + | 120 | WP_071777697.1 | GpE family phage tail protein | - |
| CEQ36_RS06165 () | 1309723..1312167 | + | 2445 | WP_080608295.1 | phage tail tape measure protein | - |
| CEQ36_RS06170 () | 1312182..1312661 | + | 480 | WP_050877693.1 | phage tail protein | - |
| CEQ36_RS06175 () | 1312661..1313821 | + | 1161 | WP_080608296.1 | phage late control D family protein | - |
| CEQ36_RS06180 () | 1313905..1314105 | + | 201 | WP_080608297.1 | ogr/Delta-like zinc finger family protein | - |
| CEQ36_RS06190 () | 1314738..1316159 | + | 1422 | WP_186004461.1 | D-serine/D-alanine/glycine transporter | - |
| CEQ36_RS06195 () | 1316240..1317049 | - | 810 | WP_005189441.1 | helix-turn-helix transcriptional regulator | - |
| CEQ36_RS06200 () | 1317073..1317621 | - | 549 | WP_005189438.1 | kinase inhibitor | - |
| CEQ36_RS06205 () | 1317905..1318387 | + | 483 | WP_005189436.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|