MGE detailed information
MGE type: Conjugative plasmid MGE length: 117229 bp
Accession: NZ_CP027395 Location: 1..117229 Organism: Escherichia coli O104:H4 strain FDAARGOS_349 Replicon: plasmid unnamed1
Accession: NZ_CP027395 Location: 1..117229 Organism: Escherichia coli O104:H4 strain FDAARGOS_349 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ27_RS28430 () | 18..251 | + | 234 | WP_077904573.1 | hypothetical protein | - |
| CEQ27_RS30070 () | 241..489 | - | 249 | WP_192941389.1 | hypothetical protein | - |
| CEQ27_RS28435 () | 671..882 | - | 212 | Protein_2 | hemolysin expression modulator Hha | - |
| CEQ27_RS28450 () | 1662..3825 | - | 2164 | Protein_3 | IncI1-type conjugal transfer membrane protein TraY | - |
| CEQ27_RS28460 () | 3922..4503 | - | 582 | Protein_4 | IncI1-type conjugal transfer protein TraX | - |
| CEQ27_RS28465 () | 4525..5733 | - | 1209 | WP_105887104.1 | IncI1-type conjugal transfer protein TraW | - |
| CEQ27_RS28470 () | 5700..6314 | - | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| CEQ27_RS28475 () | 6314..9358 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| CEQ27_RS28480 () | 9410..10246 | - | 837 | WP_105887105.1 | IncI1-type conjugal transfer protein TraT | - |
| CEQ27_RS28485 () | 10230..10418 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| CEQ27_RS28490 () | 10482..10884 | - | 403 | Protein_10 | IncI1-type conjugal transfer protein TraR | - |
| CEQ27_RS28495 () | 10935..11462 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CEQ27_RS28500 () | 11462..12166 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CEQ27_RS28505 () | 12166..13455 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| CEQ27_RS28510 () | 13458..14441 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| CEQ27_RS28515 () | 14452..15144 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CEQ27_RS28520 () | 15141..15488 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| CEQ27_RS28525 () | 15506..19269 | - | 3764 | Protein_17 | DNA primase | - |
| CEQ27_RS28530 () | 19359..19910 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| CEQ27_RS28535 () | 19925..20215 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| CEQ27_RS28540 () | 20212..21360 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| CEQ27_RS28545 () | 21357..22175 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| CEQ27_RS28550 () | 22172..22630 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| CEQ27_RS28555 () | 23025..23609 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| CEQ27_RS28560 () | 23669..24871 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| CEQ27_RS28565 () | 24957..25781 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| CEQ27_RS28570 () | 25932..27086 | - | 1155 | WP_001139956.1 | integrase | - |
| CEQ27_RS28605 () | 28851..30143 | - | 1293 | WP_105887108.1 | hypothetical protein | VF |
| CEQ27_RS28610 () | 30143..30799 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| CEQ27_RS28615 () | 30784..31344 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| CEQ27_RS28620 () | 31354..31968 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| CEQ27_RS28625 () | 31985..33070 | - | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CEQ27_RS28630 () | 33083..34636 | - | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| CEQ27_RS28635 () | 34647..35099 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| CEQ27_RS28640 () | 35086..36381 | - | 1296 | WP_000752782.1 | type 4b pilus protein PilO2 | - |
| CEQ27_RS28645 () | 36374..38030 | - | 1657 | Protein_35 | Outer membrane lipoprotein BfpB | VF |
| CEQ27_RS28650 () | 38067..38504 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| CEQ27_RS28655 () | 38504..39571 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| CEQ27_RS28670 () | 40618..40872 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| CEQ27_RS28675 () | 41044..41727 | - | 684 | WP_000213862.1 | conjugal transfer protein TraC | - |
| CEQ27_RS28685 () | 41981..42514 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| CEQ27_RS28695 () | 42956..43243 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| CEQ27_RS28700 () | 43161..43424 | - | 264 | WP_001387472.1 | ash family protein | - |
| CEQ27_RS28715 () | 44397..45428 | + | 1032 | WP_000907869.1 | replication initiation protein | - |
| CEQ27_RS28730 () | 46498..47007 | - | 510 | WP_000045395.1 | hypothetical protein | - |
| CEQ27_RS28735 () | 47063..47665 | - | 603 | WP_000517687.1 | hypothetical protein | - |
| CEQ27_RS28745 () | 48018..49364 | + | 1347 | WP_001132021.1 | hypothetical protein | - |
| CEQ27_RS28755 () | 49852..52647 | - | 2796 | Protein_47 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CEQ27_RS28760 () | 52661..52993 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| CEQ27_RS28765 () | 53040..53915 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| CEQ27_RS28770 () | 54171..55433 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| CEQ27_RS28775 () | 55639..55833 | - | 195 | Protein_51 | Tn3 family transposase TnpA_Tn3 | Transposase |
| CEQ27_RS28780 () | 55997..56554 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| CEQ27_RS28785 () | 56737..57597 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| CEQ27_RS30075 () | 57866..58168 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| CEQ27_RS28795 () | 58165..58791 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| CEQ27_RS28800 () | 58995..60266 | - | 1272 | WP_000457515.1 | Y-family DNA polymerase | - |
| CEQ27_RS28805 () | 60266..60703 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CEQ27_RS28810 () | 60700..60948 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CEQ27_RS28825 () | 61367..62269 | + | 903 | WP_023383827.1 | DUF1281 domain-containing protein | - |
| CEQ27_RS28830 () | 62266..62577 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| CEQ27_RS28835 () | 62654..63337 | + | 684 | WP_000086153.1 | DNA methylase | - |
| CEQ27_RS28840 () | 63338..63559 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| CEQ27_RS28845 () | 63573..64007 | + | 435 | WP_000274412.1 | DUF1380 family protein | - |
| CEQ27_RS30080 () | 64053..64829 | + | 777 | WP_001005022.1 | hypothetical protein | - |
| CEQ27_RS28860 () | 65366..65668 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| CEQ27_RS28865 () | 65715..66137 | + | 423 | WP_000271745.1 | DUF1380 family protein | - |
| CEQ27_RS28870 () | 66134..66325 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| CEQ27_RS28875 () | 66339..66710 | + | 372 | WP_001392076.1 | hypothetical protein | - |
| CEQ27_RS28885 () | 67094..67621 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| CEQ27_RS28890 () | 67679..67912 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| CEQ27_RS28895 () | 67971..69929 | + | 1959 | WP_001145488.1 | ParB/RepB/Spo0J family partition protein | - |
| CEQ27_RS28900 () | 69984..70418 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| CEQ27_RS28905 () | 70415..71134 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| CEQ27_RS28910 () | 71131..71727 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| CEQ27_RS28920 () | 72189..72689 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| CEQ27_RS28935 () | 73418..73852 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| CEQ27_RS28940 () | 73946..74212 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| CEQ27_RS28945 () | 74389..74778 | + | 390 | WP_000833766.1 | hypothetical protein | - |
| CEQ27_RS28950 () | 74775..75689 | + | 915 | WP_000038348.1 | Recombination-promoting nuclease RpnA | VF |
| CEQ27_RS28955 () | 75751..75957 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| CEQ27_RS28960 () | 75988..76239 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CEQ27_RS28965 () | 76273..76470 | - | 198 | WP_001161107.1 | hypothetical protein | - |
| CEQ27_RS28975 () | 76819..77667 | + | 849 | WP_001077053.1 | DUF4942 domain-containing protein | - |
| CEQ27_RS28980 () | 77754..78089 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| CEQ27_RS28985 () | 78323..78655 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| CEQ27_RS28990 () | 78666..81365 | + | 2700 | WP_001387486.1 | Protein TraI | Relaxase |
| CEQ27_RS28995 () | 81402..83693 | - | 2292 | WP_001289278.1 | conjugal transfer protein TrbC | - |
| CEQ27_RS29000 () | 83686..84756 | - | 1071 | WP_000151588.1 | IncI1-type conjugal transfer protein TrbB | - |
| CEQ27_RS29005 () | 84775..85983 | - | 1209 | WP_000121263.1 | hypothetical protein | VF |
| CEQ27_RS29010 () | 86290..87381 | - | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 87584..87646 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87584..87646 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87584..87646 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 87584..87646 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| CEQ27_RS29015 () | 87696..87848 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| CEQ27_RS29020 () | 87920..88171 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| CEQ27_RS29025 () | 88471..88767 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| CEQ27_RS30085 () | 88832..89008 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| CEQ27_RS29030 () | 89188..89397 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| CEQ27_RS29035 () | 89495..90109 | - | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CEQ27_RS29040 () | 90185..92352 | - | 2168 | Protein_97 | IncI1-type conjugal transfer membrane protein TraY | - |
| CEQ27_RS29045 () | 92449..93033 | - | 585 | WP_001037983.1 | IncI1-type conjugal transfer protein TraX | - |
| CEQ27_RS29050 () | 93062..94264 | - | 1203 | WP_001387490.1 | IncI1-type conjugal transfer protein TraW | - |
| CEQ27_RS29055 () | 94231..94845 | - | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| CEQ27_RS29060 () | 94845..97889 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| CEQ27_RS29065 () | 97979..98779 | - | 801 | WP_001164783.1 | IncI1-type conjugal transfer protein TraT | - |
| CEQ27_RS29070 () | 98763..98951 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| CEQ27_RS29075 () | 99015..99419 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| CEQ27_RS29080 () | 99470..99997 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| CEQ27_RS29085 () | 99997..100701 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| CEQ27_RS29090 () | 100701..101990 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| CEQ27_RS29095 () | 101993..102976 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| CEQ27_RS29100 () | 102987..103679 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| CEQ27_RS29105 () | 103676..104022 | - | 347 | Protein_110 | conjugal transfer protein | - |
| CEQ27_RS30090 () | 104040..106655 | - | 2616 | Protein_111 | DNA primase | - |
| CEQ27_RS29130 () | 106943..109384 | + | 2442 | Protein_112 | DNA primase | - |
| CEQ27_RS29135 () | 109402..109748 | + | 347 | Protein_113 | conjugal transfer protein | - |
| CEQ27_RS29140 () | 109798..110432 | + | 635 | Protein_114 | DotI/IcmL family type IV secretion protein | - |
| CEQ27_RS29145 () | 110443..111425 | + | 983 | Protein_115 | hypothetical protein | VF |
| CEQ27_RS29150 () | 111428..112714 | + | 1287 | Protein_116 | conjugal transfer protein TraO | - |
| CEQ27_RS29155 () | 112714..113413 | + | 700 | Protein_117 | IncI1-type conjugal transfer protein TraP | - |
| CEQ27_RS29160 () | 113413..113939 | + | 527 | Protein_118 | conjugal transfer protein TraQ | - |
| CEQ27_RS29165 () | 113990..114392 | + | 403 | Protein_119 | IncI1-type conjugal transfer protein TraR | - |
| CEQ27_RS29170 () | 114456..114644 | + | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| CEQ27_RS29175 () | 114628..115410 | + | 783 | Protein_121 | conjugal transfer protein TraT | - |
| CEQ27_RS29180 () | 115519..117229 | + | 1711 | Protein_122 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|