NZ_CP027390912100..1073452

MGE detailed information

MGE type: Prophage        MGE length: 161353 bp
Accession: NZ_CP027390        Location: 912100..1073452         Organism: Escherichia coli strain 2015C-4944       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AX062_RS04970 () 907999..909219 + 1221 WP_000225276.1 DNA-binding transcriptional repressor Mlc -
AX062_RS04975 () 909344..910039 + 696 WP_000919226.1 dethiobiotin synthase -
AX062_RS04980 () 909992..911284 - 1293 WP_001315626.1 voltage-gated ClC-type chloride channel ClcB -
AX062_RS04985 () 911443..912057 - 615 WP_000148710.1 Tat proofreading chaperone DmsD -
AX062_RS04990 () 912100..912954 - 855 WP_000526492.1 dimethyl sulfoxide reductase anchor subunit -
AX062_RS04995 () 912956..913573 - 618 WP_000213028.1 dimethylsulfoxide reductase subunit B -
AX062_RS05000 () 913584..916007 - 2424 WP_001342196.1 dimethyl sulfoxide reductase subunit A -
AX062_RS05005 () 916068..918493 - 2426 Protein_928 dimethyl sulfoxide reductase subunit A -
AX062_RS05010 () 918692..918997 - 306 WP_001307224.1 DUF1161 domain-containing protein -
AX062_RS05015 () 919105..919815 + 711 WP_001321287.1 YnfC family lipoprotein -
AX062_RS05020 () 919818..920378 - 561 WP_001138576.1 spermidine N1-acetyltransferase -
AX062_RS05025 () 920413..920754 - 342 WP_000705211.1 DUF1283 family protein -
AX062_RS05030 () 920889..921215 + 327 WP_000598292.1 YnfA family protein -
AX062_RS05040 () 921421..922635 + 1215 WP_001295394.1 starvation-sensing protein RspA -
AX062_RS05045 () 922647..923666 + 1020 WP_000836079.1 Zn-dependent oxidoreductase -
AX062_RS05055 () 923854..925134 - 1281 WP_000877011.1 Putative defective protein IntQ ; Integrase Integrase
AX062_RS05060 () 925169..925399 - 231 Protein_937 excisionase family protein -
AX062_RS05065 () 925389..926066 + 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
AX062_RS05070 () 926066..926413 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
AX062_RS05075 () 926433..928004 + 1572 WP_000381395.1 IS66 family transposase ISCro1 Transposase
AX062_RS05080 () 928035..928127 - 93 Protein_941 excisionase family protein -
AX062_RS05085 () 928200..930671 - 2472 WP_000048369.1 exonuclease -
AX062_RS05090 () 930765..930956 - 192 WP_001083280.1 lysis protein YdfD -
AX062_RS05095 () 930953..931141 - 189 WP_000854559.1 cell division inhibition protein DicB -
AX062_RS05100 () 931628..932203 - 576 WP_000347171.1 hypothetical protein -
AX062_RS05105 () 932205..932360 - 156 WP_000379589.1 DUF1391 family protein -
AX062_RS05110 () 932553..932960 - 408 WP_001003381.1 helix-turn-helix domain-containing protein -
AX062_RS05115 () 933038..933265 + 228 WP_000476993.1 transcriptional regulator -
AX062_RS05120 () 933249..933770 + 522 WP_000705349.1 hypothetical protein -
AX062_RS05125 () 933751..934716 + 966 WP_000054507.1 hypothetical protein -
AX062_RS05130 () 934757..935176 + 420 WP_001151195.1 DUF977 family protein -
AX062_RS05135 () 935210..936550 + 1341 WP_000589012.1 ISNCY family transposase ISCARN112 Transposase
AX062_RS05140 () 936987..937319 - 333 WP_001317460.1 FlxA-like family protein -
AX062_RS05145 () 937522..937827 - 306 WP_001326990.1 hypothetical protein -
AX062_RS05150 () 937852..938091 + 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
AX062_RS05155 () 938091..938378 + 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
AX062_RS05160 () 938450..938605 + 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
AX062_RS05165 () 938822..939073 + 252 WP_000980994.1 hypothetical protein -
AX062_RS05170 () 939140..939418 + 279 WP_012304870.1 hypothetical protein -
AX062_RS05175 () 939420..940469 + 1050 WP_001265198.1 DUF968 domain-containing protein -
AX062_RS05180 () 940483..941235 + 753 WP_001047133.1 antitermination protein -
AX062_RS32365 () 941513..941602 - 90 WP_120795389.1 hypothetical protein -
AX062_RS05185 () 941657..941869 - 213 WP_000087756.1 cold shock-like protein CspF -
AX062_RS05190 () 942170..942385 + 216 WP_000066483.1 cold shock-like protein CspB -
AX062_RS33040 () 942749..942919 - 171 WP_001405948.1 putative zinc-binding protein YnfU -
AX062_RS05195 () 943139..943354 + 216 WP_000839590.1 phage lysis protein EssD -
AX062_RS05200 () 943359..943670 + 312 WP_000189915.1 YdfR family protein -
AX062_RS05205 () 943667..944200 + 534 WP_001092971.1 lysozyme -
AX062_RS05210 () 944197..944694 + 498 WP_032346345.1 DUF2514 domain-containing protein -
AX062_RS05215 () 945057..945269 + 213 WP_000066495.1 cold shock protein CspI -
AX062_RS05220 () 945280..945468 + 189 WP_071524604.1 cold-shock protein -
AX062_RS32370 () 945471..945536 + 66 WP_122134696.1 hypothetical protein -
AX062_RS32375 () 945616..945771 + 156 WP_001309517.1 hypothetical protein -
AX062_RS05230 () 945943..946116 + 174 WP_001019606.1 addiction module toxin, GnsA/GnsB family -
AX062_RS05235 () 946268..946678 - 411 WP_000035577.1 DUF1398 domain-containing protein -
AX062_RS05245 () 946979..947185 + 207 WP_001031435.1 hypothetical protein -
AX062_RS05250 () 947746..948285 + 540 WP_000421825.1 DUF1441 family protein -
AX062_RS05255 () 948294..950393 + 2100 WP_000507036.1 phage terminase large subunit family protein -
AX062_RS05260 () 950390..950602 + 213 WP_001072975.1 hypothetical protein -
AX062_RS05265 () 950602..952110 + 1509 WP_000985929.1 phage portal protein -
AX062_RS05270 () 952055..954082 + 2028 WP_001136588.1 ATP-dependent Clp protease proteolytic subunit VF
AX062_RS05275 () 954169..954492 + 324 WP_001097041.1 DUF2190 family protein -
AX062_RS05280 () 954485..954760 + 276 WP_001283148.1 DNA breaking-rejoining protein -
AX062_RS05285 () 954772..955350 + 579 WP_000677128.1 phage tail protein -
AX062_RS05290 () 955347..955748 + 402 WP_001079398.1 phage minor tail U family protein -
AX062_RS05295 () 955759..956502 + 744 WP_000211132.1 Ig domain-containing protein -
AX062_RS05300 () 956563..956949 + 387 WP_001341514.1 phage minor tail protein G -
AX062_RS05305 () 956958..957287 + 330 WP_001161009.1 phage tail assembly protein T -
AX062_RS05310 () 957259..960324 + 3066 WP_000372024.1 phage tail tape measure protein -
AX062_RS05315 () 960324..960653 + 330 WP_000447251.1 phage tail protein -
AX062_RS05320 () 960663..961361 + 699 WP_001152371.1 phage minor tail protein L -
AX062_RS05325 () 961366..962109 + 744 WP_000140707.1 C40 family peptidase -
AX062_RS05330 () 962007..962654 + 648 WP_000741589.1 tail assembly protein -
AX062_RS05335 () 962715..966128 + 3414 WP_000515505.1 host specificity protein J -
AX062_RS05340 () 966199..966798 + 600 WP_001233114.1 Outer membrane protein X VF
AX062_RS05345 () 966863..969823 + 2961 WP_106910116.1 prophage tail fiber N-terminal domain-containing protein -
AX062_RS05350 () 969823..970398 + 576 WP_000885616.1 tail fiber assembly protein -
AX062_RS05355 () 970496..971086 - 591 WP_000086514.1 Tn3 family transposase TnpR_ISSba14 Transposase
AX062_RS05360 () 971403..971636 - 234 WP_000836768.1 cold shock protein YdfK -
AX062_RS32380 () 971705..971818 - 114 WP_120795384.1 hypothetical protein -
AX062_RS05370 () 972467..973762 - 1296 WP_001206147.1 Putative defective protein IntQ ; Integrase Integrase
AX062_RS05375 () 973782..974033 - 252 WP_000005551.1 excisionase family protein -
AX062_RS05380 () 974106..976568 - 2463 WP_106910084.1 exonuclease -
AX062_RS05385 () 976661..976849 - 189 WP_000199475.1 DUF1482 family protein -
AX062_RS05390 () 976846..977034 - 189 WP_000449175.1 cell division inhibitor -
AX062_RS05400 () 977599..977808 + 210 WP_001133037.1 hypothetical protein -
AX062_RS05405 () 977809..978447 - 639 WP_000394548.1 hypothetical protein -
AX062_RS05410 () 978459..978611 - 153 WP_000380321.1 DUF1391 family protein -
AX062_RS05415 () 978778..979185 - 408 WP_000379972.1 helix-turn-helix domain-containing protein -
AX062_RS05420 () 979269..979499 + 231 WP_000920571.1 dicB transcriptional regulator DicC -
AX062_RS05425 () 979483..980004 + 522 WP_000705368.1 hypothetical protein -
AX062_RS05430 () 979985..980950 + 966 WP_000054520.1 hypothetical protein -
AX062_RS05435 () 980957..981697 + 741 WP_000790460.1 ATP-binding protein -
AX062_RS05440 () 981727..982488 + 762 WP_000450895.1 DUF1627 domain-containing protein -
AX062_RS05445 () 982548..982733 + 186 WP_000215512.1 hypothetical protein -
AX062_RS05450 () 983085..983636 + 552 WP_000211993.1 ORF6N domain-containing protein -
AX062_RS05460 () 983908..984063 + 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
AX062_RS05465 () 984166..984483 - 318 WP_000042395.1 DNA-binding transcriptional regulator -
AX062_RS05470 () 984476..984847 - 372 WP_001217944.1 type II toxin-antitoxin system RelE/ParE family toxin -
AX062_RS05475 () 985071..985298 + 228 WP_001452497.1 hypothetical protein -
AX062_RS05480 () 985352..985621 + 270 WP_012817785.1 hypothetical protein -
AX062_RS05485 () 985623..986672 + 1050 WP_001375683.1 DUF968 domain-containing protein -
AX062_RS05490 () 986686..987438 + 753 WP_001047111.1 antitermination protein -
AX062_RS05520 () 988283..988507 + 225 WP_000735807.1 hypothetical protein -
AX062_RS05525 () 988560..988769 + 210 WP_000498121.1 hypothetical protein -
AX062_RS05530 () 988959..989390 + 432 WP_001299632.1 tellurite resistance protein -
AX062_RS05535 () 989387..989642 + 256 Protein_1027 DUF3927 family protein -
AX062_RS05545 () 989869..991719 + 1851 WP_000023191.1 SASA family carbohydrate esterase -
AX062_RS05555 () 992158..992373 + 216 WP_024165672.1 class II holin family protein -
AX062_RS05560 () 992377..993168 + 792 WP_001041949.1 DUF1327 domain-containing protein -
AX062_RS05565 () 993680..994213 + 534 WP_000992045.1 lysozyme -
AX062_RS05570 () 994434..994543 + 110 Protein_1032 hypothetical protein -
AX062_RS32390 () 994765..994950 + 186 WP_001208680.1 Rz1 family lipoprotein -
AX062_RS05585 () 995478..995792 + 315 WP_001303878.1 PerC family transcriptional regulator -
AX062_RS05590 () 995874..996098 - 225 WP_001431375.1 YlcI/YnfO family protein -
AX062_RS05600 () 996485..997030 + 546 WP_000867498.1 terminase small subunit -
AX062_RS05605 () 997005..998930 + 1926 WP_001027230.1 phage terminase large subunit family protein -
AX062_RS05610 () 998927..999133 + 207 WP_000198153.1 gpW family protein -
AX062_RS05615 () 999130..1000727 + 1598 Protein_1039 phage portal protein -
AX062_RS05620 () 1000708..1002027 + 1320 WP_000123254.1 S49 family peptidase -
AX062_RS05625 () 1002037..1002369 + 333 WP_001295978.1 head decoration protein -
AX062_RS05630 () 1002425..1003452 + 1028 Protein_1042 major capsid protein -
AX062_RS05635 () 1003495..1003889 + 395 Protein_1043 DNA-packaging protein FI -
AX062_RS05640 () 1003901..1004255 + 355 Protein_1044 head-tail joining protein -
AX062_RS05645 () 1004267..1004844 + 578 Protein_1045 phage tail protein -
AX062_RS05650 () 1004841..1005236 + 396 WP_000683137.1 phage minor tail U family protein -
AX062_RS05655 () 1005244..1005996 + 753 WP_000235067.1 Ig domain-containing protein -
AX062_RS05660 () 1006010..1006432 + 423 WP_000479045.1 phage minor tail protein G -
AX062_RS05665 () 1006459..1006872 + 414 WP_000533442.1 phage tail assembly protein T -
AX062_RS05670 () 1006853..1009465 + 2613 WP_000081792.1 phage tail tape measure protein -
AX062_RS05675 () 1009462..1009791 + 330 WP_000847298.1 phage tail protein -
AX062_RS05680 () 1009791..1010489 + 699 WP_001448659.1 phage minor tail protein L -
AX062_RS05685 () 1010500..1011243 + 744 WP_064551617.1 C40 family peptidase -
AX062_RS05690 () 1011189..1011821 + 633 WP_122993786.1 tail assembly protein -
AX062_RS05695 () 1012067..1015543 + 3477 WP_106910085.1 host specificity protein J -
AX062_RS05700 () 1015612..1016235 + 624 WP_001216290.1 Attachment invasion locus protein VF
AX062_RS05705 () 1016300..1017613 + 1314 WP_000268933.1 ISNCY family transposase KIS Transposase
AX062_RS05710 () 1017615..1017884 + 270 WP_001023445.1 phage tail fiber C-terminal domain-containing protein -
AX062_RS05715 () 1018009..1018761 - 753 WP_012817749.1 Secreted effector protein EspF(U) VF
AX062_RS05725 () 1019565..1020191 - 627 WP_077630526.1 hypothetical protein ; Integrase Integrase
AX062_RS05730 () 1020267..1021480 + 1214 WP_162830411.1 IS3 family transposase IS629 Transposase
AX062_RS05735 () 1021520..1021780 - 261 WP_001232849.1 hypothetical protein -
AX062_RS05740 () 1021875..1022117 - 243 WP_000273151.1 DUF4224 domain-containing protein -
AX062_RS05745 () 1022185..1024635 - 2451 WP_000048499.1 exonuclease -
AX062_RS05750 () 1024730..1024918 - 189 WP_000199475.1 DUF1482 family protein -
AX062_RS05755 () 1024915..1025103 - 189 WP_000449175.1 cell division inhibitor -
AX062_RS05765 () 1025672..1025890 - 219 WP_001171921.1 hypothetical protein -
AX062_RS32810 () 1025962..1026261 - 300 WP_012817750.1 hypothetical protein -
AX062_RS05780 () 1026597..1026899 + 303 WP_000692026.1 type II toxin-antitoxin system HigB family toxin -
AX062_RS05785 () 1026902..1027261 + 360 WP_001022415.1 helix-turn-helix domain-containing protein -
AX062_RS05790 () 1027308..1027700 - 393 WP_000578360.1 helix-turn-helix domain-containing protein -
AX062_RS05795 () 1027827..1028087 + 261 WP_001172789.1 helix-turn-helix domain-containing protein -
AX062_RS05800 () 1028084..1028521 + 438 WP_000693932.1 hypothetical protein -
AX062_RS32405 () 1028608..1029618 + 1011 WP_000729535.1 DUF1376 domain-containing protein -
AX062_RS05810 () 1029530..1030072 + 543 WP_072096947.1 replication protein -
AX062_RS05815 () 1030106..1030831 + 726 WP_000450641.1 DUF1627 domain-containing protein -
AX062_RS05820 () 1030847..1031239 + 393 WP_001040234.1 DUF977 family protein -
AX062_RS05825 () 1031236..1031532 + 297 WP_001266133.1 DUF4406 domain-containing protein -
AX062_RS05830 () 1031529..1031990 + 462 WP_001209480.1 ead/Ea22-like family protein -
AX062_RS05835 () 1031968..1032324 + 357 WP_000403783.1 hypothetical protein -
AX062_RS05840 () 1032375..1032587 + 213 WP_000935422.1 hypothetical protein -
AX062_RS05845 () 1032621..1032803 + 183 WP_001224662.1 hypothetical protein -
AX062_RS32815 () 1032796..1032972 + 177 WP_000753069.1 hypothetical protein -
AX062_RS05850 () 1032969..1033604 + 636 WP_001289353.1 ead/Ea22-like family protein -
AX062_RS05855 () 1033692..1033910 + 219 WP_000209152.1 DUF4014 family protein -
AX062_RS05860 () 1033912..1034277 + 366 WP_001229304.1 HNH endonuclease -
AX062_RS05865 () 1034385..1034618 + 234 WP_000350274.1 hypothetical protein -
AX062_RS05870 () 1034823..1035122 - 300 WP_000220601.1 type II toxin-antitoxin system RelE/ParE family toxin -
AX062_RS05875 () 1035128..1035385 - 258 WP_001260977.1 type II toxin-antitoxin system ParD family antitoxin -
AX062_RS05880 () 1035521..1035793 + 273 WP_001342259.1 hypothetical protein -
AX062_RS05885 () 1035795..1036841 + 1047 WP_106910086.1 DUF968 domain-containing protein -
AX062_RS05890 () 1036854..1037213 + 360 WP_000904103.1 RusA family crossover junction endodeoxyribonuclease -
AX062_RS05895 () 1037222..1037752 + 531 WP_000640048.1 DUF1133 family protein -
AX062_RS32410 () 1037994..1038191 + 198 WP_000917770.1 hypothetical protein -
AX062_RS05905 () 1038326..1039039 + 714 WP_000301785.1 helix-turn-helix domain-containing protein -
AX062_RS05925 () 1039489..1039920 + 432 WP_000466957.1 tellurite resistance TerB family protein -
AX062_RS05930 () 1039917..1040172 + 256 Protein_1097 DUF3927 family protein -
AX062_RS05940 () 1040398..1042335 + 1938 WP_000023293.1 DUF1737 domain-containing protein -
AX062_RS05945 () 1042471..1042650 + 180 WP_000143463.1 DUF1378 family protein -
AX062_RS05950 () 1042691..1042936 + 246 WP_001290230.1 DUF826 domain-containing protein -
AX062_RS05955 () 1043014..1043229 + 216 WP_001072901.1 class II holin family protein -
AX062_RS05960 () 1043234..1043767 + 534 WP_000087714.1 lysozyme -
AX062_RS05965 () 1044042..1044611 + 570 WP_001056882.1 hypothetical protein -
AX062_RS32415 () 1044611..1044760 + 150 WP_000455402.1 hypothetical protein -
AX062_RS32420 () 1044988..1045173 + 186 WP_001208680.1 Rz1 family lipoprotein -
AX062_RS05980 () 1045699..1046013 + 315 WP_001302717.1 PerC family transcriptional regulator -
AX062_RS05985 () 1046095..1046319 - 225 WP_001448509.1 YlcI/YnfO family protein -
AX062_RS05990 () 1046361..1046726 + 366 WP_106910087.1 HNH endonuclease -
AX062_RS06000 () 1047018..1047581 + 564 WP_000958402.1 terminase small subunit -
AX062_RS06005 () 1047578..1049239 + 1662 WP_001341975.1 terminase large subunit -
AX062_RS06010 () 1049303..1051240 + 1938 WP_000173033.1 phage major capsid protein -
AX062_RS06015 () 1051285..1051506 + 222 WP_001063025.1 hypothetical protein -
AX062_RS06020 () 1051452..1054036 + 2585 Protein_1113 phage portal protein -
AX062_RS06025 () 1054033..1054359 + 327 WP_000125984.1 head-tail connector protein -
AX062_RS06030 () 1054370..1054720 + 351 WP_001007892.1 phage head closure protein -
AX062_RS06035 () 1054717..1055163 + 447 WP_000573391.1 HK97 gp10 family phage protein -
AX062_RS06040 () 1055160..1055504 + 345 WP_000133388.1 DUF3168 domain-containing protein -
AX062_RS06045 () 1055570..1056286 + 717 WP_001275459.1 tail protein -
AX062_RS06050 () 1056292..1056666 + 375 WP_001030060.1 phage tail assembly chaperone -
AX062_RS06055 () 1056762..1056971 + 210 WP_001513217.1 DUF4035 domain-containing protein -
AX062_RS06060 () 1057019..1060261 + 3243 WP_106910088.1 phage tail tape measure protein -
AX062_RS06065 () 1060254..1060595 + 342 WP_000807940.1 phage tail protein -
AX062_RS06070 () 1060595..1061293 + 699 WP_106910089.1 phage minor tail protein L -
AX062_RS06075 () 1061310..1061630 - 321 WP_001302649.1 Arc family DNA-binding protein -
AX062_RS06080 () 1061738..1061911 + 174 WP_001154345.1 Arc family DNA-binding protein -
AX062_RS06085 () 1061982..1062905 + 924 WP_001432327.1 phage antirepressor Ant -
AX062_RS06090 () 1062960..1063697 + 738 WP_001375566.1 C40 family peptidase -
AX062_RS06095 () 1063643..1064275 + 633 WP_122993786.1 tail assembly protein -
AX062_RS06100 () 1064521..1067997 + 3477 WP_032363152.1 host specificity protein J -
AX062_RS06105 () 1068064..1068663 + 600 WP_001230400.1 Outer membrane protein X VF
AX062_RS06110 () 1068728..1070041 + 1314 WP_000268971.1 ISNCY family transposase KIS Transposase
AX062_RS06115 () 1070043..1070312 + 270 WP_001023986.1 phage tail fiber C-terminal domain-containing protein -
AX062_RS06120 () 1070644..1070907 - 264 Protein_1133 antA/AntB antirepressor family protein -
AX062_RS06140 () 1071868..1072041 + 174 WP_001273658.1 general stress protein -
AX062_RS06145 () 1072124..1073452 - 1329 WP_001240628.1 pyrimidine utilization transport protein G -
AX062_RS06150 () 1073473..1073967 - 495 WP_001028095.1 pyrimidine utilization flavin reductase protein F -
AX062_RS06155 () 1073978..1074568 - 591 WP_001001171.1 malonic semialdehyde reductase -
AX062_RS06160 () 1074578..1075378 - 801 WP_001341462.1 pyrimidine utilization protein D -
AX062_RS06165 () 1075386..1075772 - 387 WP_001126777.1 pyrimidine utilization protein C -
AX062_RS06170 () 1075784..1076476 - 693 WP_001307708.1 peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB -
AX062_RS06175 () 1076476..1077567 - 1092 WP_001297176.1 pyrimidine utilization protein A -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance