MGE detailed information
MGE type: Prophage MGE length: 72245 bp
Accession: NZ_CP027390 Location: 589424..661668 Organism: Escherichia coli strain 2015C-4944 Replicon: chromosome
Accession: NZ_CP027390 Location: 589424..661668 Organism: Escherichia coli strain 2015C-4944 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AX062_RS03115 () | 585507..586148 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AX062_RS03120 () | 586204..587382 | - | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AX062_RS03125 () | 587516..587806 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| AX062_RS03130 () | 587873..588229 | + | 357 | WP_001295500.1 | protein YebF | - |
| AX062_RS03135 () | 588556..589215 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| AX062_RS03140 () | 589424..591484 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| AX062_RS03145 () | 591481..592143 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| AX062_RS03150 () | 592167..592823 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| AX062_RS03155 () | 592925..593155 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| AX062_RS03160 () | 593294..593668 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| AX062_RS03165 () | 593672..594544 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| AX062_RS03170 () | 594557..594898 | + | 342 | WP_000976492.1 | YebY family protein | - |
| AX062_RS03175 () | 595251..596366 | - | 1116 | WP_001189092.1 | hypothetical protein ; Integrase | Integrase |
| AX062_RS03180 () | 596332..596613 | - | 282 | WP_001443927.1 | excisionase | - |
| AX062_RS03185 () | 596720..596908 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 596724..596902 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 596724..596902 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 596724..596902 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 596724..596902 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| AX062_RS03190 () | 596901..597095 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| AX062_RS03195 () | 597152..597559 | - | 408 | Protein_591 | recombinase RecT | - |
| AX062_RS03205 () | 598824..599228 | - | 405 | Protein_593 | recombinase RecT | - |
| AX062_RS03210 () | 599221..601872 | - | 2652 | WP_000105101.1 | exodeoxyribonuclease VIII | - |
| AX062_RS03215 () | 601971..602246 | - | 276 | WP_001307773.1 | hypothetical protein | - |
| AX062_RS03220 () | 602320..602496 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| AX062_RS03225 () | 602490..602711 | - | 222 | WP_000560218.1 | killing protein KilR | - |
| AX062_RS03230 () | 603132..603284 | - | 153 | WP_001427316.1 | DUF1391 family protein | - |
| AX062_RS03235 () | 603571..603849 | - | 279 | WP_001448501.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AX062_RS03240 () | 603851..604042 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| AX062_RS03245 () | 604063..604434 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| AX062_RS03250 () | 604532..604834 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| AX062_RS03255 () | 604831..605256 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| AX062_RS03260 () | 605279..606241 | + | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| AX062_RS03265 () | 606248..606989 | + | 742 | Protein_605 | ATP-binding protein | - |
| AX062_RS03270 () | 607015..607776 | + | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| AX062_RS03275 () | 607809..608090 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| AX062_RS03280 () | 608087..608314 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| AX062_RS03285 () | 608307..608618 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| AX062_RS03290 () | 608746..608964 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| AX062_RS03295 () | 608966..609523 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| AX062_RS03300 () | 609814..609969 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| AX062_RS03305 () | 610089..610433 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| AX062_RS03310 () | 610555..610827 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| AX062_RS03315 () | 610829..611878 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| AX062_RS03320 () | 611891..612265 | + | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AX062_RS03325 () | 612262..613083 | + | 822 | WP_000762928.1 | antitermination protein | - |
| AX062_RS03330 () | 613321..613683 | + | 363 | Protein_618 | tellurite resistance TerB family protein | - |
| AX062_RS03335 () | 613680..613932 | + | 253 | Protein_619 | DUF3927 family protein | - |
| AX062_RS03340 () | 614254..616104 | + | 1851 | WP_000143049.1 | SASA family carbohydrate esterase | - |
| AX062_RS03350 () | 616543..616758 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| AX062_RS03355 () | 616758..617255 | + | 498 | WP_000075132.1 | lysozyme RrrD | - |
| AX062_RS03360 () | 617252..617689 | + | 438 | WP_000092325.1 | lysis protein | - |
| AX062_RS03365 () | 617839..618456 | + | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| AX062_RS03375 () | 618644..618838 | - | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| AX062_RS03385 () | 619227..619772 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| AX062_RS03390 () | 619747..621672 | + | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| AX062_RS03395 () | 621669..621875 | + | 207 | WP_000198153.1 | gpW family protein | - |
| AX062_RS03400 () | 621872..623473 | + | 1602 | WP_001443752.1 | phage portal protein | - |
| AX062_RS03405 () | 623454..624773 | + | 1320 | WP_000123251.1 | S49 family peptidase | - |
| AX062_RS03410 () | 624783..625115 | + | 333 | WP_001365129.1 | head decoration protein | - |
| AX062_RS03415 () | 625171..626196 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| AX062_RS03420 () | 626238..626633 | + | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| AX062_RS03425 () | 626645..626998 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| AX062_RS03430 () | 627010..627588 | + | 579 | WP_000975096.1 | phage tail protein | - |
| AX062_RS03435 () | 627585..627980 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| AX062_RS03440 () | 627988..628740 | + | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| AX062_RS03445 () | 628754..629176 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| AX062_RS03450 () | 629203..629616 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| AX062_RS03455 () | 629597..632209 | + | 2613 | WP_000081762.1 | phage tail tape measure protein | - |
| AX062_RS03460 () | 632206..632535 | + | 330 | WP_000847298.1 | phage tail protein | - |
| AX062_RS03465 () | 632535..633233 | + | 699 | WP_001357740.1 | phage minor tail protein L | - |
| AX062_RS03470 () | 633244..633987 | + | 744 | WP_000194723.1 | C40 family peptidase | - |
| AX062_RS03475 () | 633933..634565 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| AX062_RS03480 () | 634908..638303 | + | 3396 | WP_106910081.1 | host specificity protein J | - |
| AX062_RS03485 () | 638442..638846 | + | 405 | WP_000839165.1 | IS66 family transposase ISEc22 | Transposase |
| AX062_RS03490 () | 638843..639190 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| AX062_RS03495 () | 639239..640777 | + | 1539 | WP_000099160.1 | IS66 family transposase ISEc22 | Transposase |
| AX062_RS03500 () | 640833..641432 | + | 600 | WP_001230428.1 | Outer membrane protein X | VF |
| AX062_RS03505 () | 641497..642810 | + | 1314 | WP_000268926.1 | ISNCY family transposase KIS | Transposase |
| AX062_RS03510 () | 642812..643081 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| AX062_RS03515 () | 643222..644097 | + | 876 | WP_000491545.1 | hypothetical protein | VF |
| AX062_RS32360 () | 644322..644972 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| AX062_RS03530 () | 644976..645242 | - | 267 | Protein_654 | hypothetical protein | - |
| AX062_RS03535 () | 645927..646583 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| AX062_RS03540 () | 646584..646775 | - | 192 | WP_001296140.1 | YebW family protein | - |
| AX062_RS03545 () | 646880..647116 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| AX062_RS03550 () | 647234..648673 | - | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| AX062_RS03555 () | 648753..651386 | - | 2634 | WP_001299674.1 | hypothetical protein | VF |
| AX062_RS03560 () | 651355..652638 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| AX062_RS03565 () | 652768..653265 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| AX062_RS03570 () | 653362..654060 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| AX062_RS03575 () | 654080..656128 | + | 2049 | WP_001431407.1 | carboxy terminal-processing peptidase | - |
| AX062_RS03580 () | 656320..657201 | + | 882 | WP_000984517.1 | protease HtpX | - |
| AX062_RS03585 () | 657247..658620 | - | 1374 | WP_001127210.1 | MFS transporter | - |
| AX062_RS03590 () | 658797..659588 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| AX062_RS03595 () | 659731..659970 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| AX062_RS03600 () | 660129..660272 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| AX062_RS03605 () | 660347..660634 | + | 288 | WP_001006866.1 | YebO family protein | - |
| AX062_RS03615 () | 661303..661446 | + | 144 | WP_001295496.1 | YobF family protein | - |
| AX062_RS03620 () | 661459..661668 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| AX062_RS03625 () | 661834..662643 | + | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| AX062_RS03630 () | 662640..663206 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| AX062_RS03640 () | 663635..664093 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| AX062_RS03645 () | 664148..664999 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| AX062_RS03650 () | 665012..665812 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|