MGE detailed information
MGE type: Prophage MGE length: 42790 bp
Accession: NZ_CP027388 Location: 970482..1013271 Organism: Escherichia coli strain 2011C-4251 Replicon: chromosome
Accession: NZ_CP027388 Location: 970482..1013271 Organism: Escherichia coli strain 2011C-4251 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P70_RS30075 () | 966471..966518 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C6P70_RS05455 () | 966532..967515 | + | 984 | WP_000387395.1 | zinc transporter ZntB | - |
| C6P70_RS05460 () | 967790..967963 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| C6P70_RS05465 () | 967993..969366 | + | 1374 | WP_000123745.1 | ATP-dependent RNA helicase DbpA | - |
| C6P70_RS05470 () | 969495..970430 | - | 936 | WP_001157382.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C6P70_RS05475 () | 970482..971717 | - | 1236 | WP_000040845.1 | Regulatory protein AtoC ; Integrase | Integrase |
| C6P70_RS05480 () | 971719..971934 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C6P70_RS05485 () | 972034..972222 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 972038..972216 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 972038..972216 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 972038..972216 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 972038..972216 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C6P70_RS05490 () | 972215..972409 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C6P70_RS05495 () | 972466..973275 | - | 810 | WP_000166315.1 | recombination protein RecT | - |
| C6P70_RS05500 () | 973268..975937 | - | 2670 | WP_000102194.1 | exodeoxyribonuclease VIII | - |
| C6P70_RS05505 () | 976018..976194 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| C6P70_RS05510 () | 976188..976409 | - | 222 | WP_000560226.1 | killing protein KilR | - |
| C6P70_RS05515 () | 976456..977304 | - | 849 | WP_000887681.1 | Rha family phage regulatory protein | - |
| C6P70_RS05520 () | 977716..977868 | - | 153 | WP_000379547.1 | DUF1391 family protein | - |
| C6P70_RS05525 () | 978175..978594 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| C6P70_RS05530 () | 978691..978933 | + | 243 | WP_001033914.1 | helix-turn-helix domain-containing protein | - |
| C6P70_RS05535 () | 978930..979352 | + | 423 | WP_000702017.1 | hypothetical protein | - |
| C6P70_RS05540 () | 979430..980218 | + | 789 | WP_001356605.1 | hypothetical protein | - |
| C6P70_RS05545 () | 980225..980971 | + | 747 | WP_000788984.1 | ATP-binding protein | - |
| C6P70_RS05550 () | 980994..981755 | + | 762 | WP_000450718.1 | DUF1627 domain-containing protein | - |
| C6P70_RS05555 () | 981771..982193 | + | 423 | WP_001151116.1 | DUF977 family protein | - |
| C6P70_RS05560 () | 982190..982420 | + | 231 | WP_000014164.1 | hypothetical protein | - |
| C6P70_RS05565 () | 982575..983225 | + | 651 | WP_001138877.1 | hypothetical protein | - |
| C6P70_RS05570 () | 983212..984333 | + | 1122 | WP_000418464.1 | Coupling protein TraD | VF |
| C6P70_RS05575 () | 984513..984668 | + | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| C6P70_RS05590 () | 985228..985827 | + | 600 | WP_000940305.1 | DUF1367 family protein | - |
| C6P70_RS05595 () | 985827..986117 | + | 291 | WP_000228017.1 | DUF1364 domain-containing protein | - |
| C6P70_RS05600 () | 986114..986656 | + | 543 | WP_000640110.1 | DUF1133 family protein | - |
| C6P70_RS05610 () | 987358..989304 | + | 1947 | WP_106913064.1 | DUF1737 domain-containing protein | - |
| C6P70_RS05615 () | 989440..989619 | + | 180 | WP_000143462.1 | DUF1378 family protein | - |
| C6P70_RS05620 () | 989660..989905 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| C6P70_RS05625 () | 989983..990198 | + | 216 | WP_001072899.1 | class II holin family protein | - |
| C6P70_RS05630 () | 990203..990736 | + | 534 | WP_000087714.1 | lysozyme | - |
| C6P70_RS05635 () | 991011..991581 | + | 571 | Protein_1024 | hypothetical protein | - |
| C6P70_RS29575 () | 991581..991727 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C6P70_RS05640 () | 991735..992202 | + | 468 | WP_001082574.1 | lysis protein | - |
| C6P70_RS05650 () | 992658..993134 | + | 477 | WP_000348565.1 | DUF1441 family protein | - |
| C6P70_RS05655 () | 993131..995254 | + | 2124 | WP_001077608.1 | phage terminase large subunit family protein | - |
| C6P70_RS05660 () | 995251..995463 | + | 213 | WP_000102414.1 | hypothetical protein | - |
| C6P70_RS05665 () | 995463..996965 | + | 1503 | WP_000974564.1 | phage portal protein | - |
| C6P70_RS05670 () | 996910..998934 | + | 2025 | WP_001114424.1 | Virulence regulon transcriptional activator VirF | VF |
| C6P70_RS05675 () | 999022..999348 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| C6P70_RS05680 () | 999341..999622 | + | 282 | WP_001281350.1 | DNA breaking-rejoining protein | - |
| C6P70_RS05685 () | 999625..1000248 | + | 624 | WP_000974966.1 | phage tail protein | - |
| C6P70_RS05690 () | 1000261..1000659 | + | 399 | WP_000682716.1 | tail protein | - |
| C6P70_RS05695 () | 1000667..1001419 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C6P70_RS05700 () | 1001433..1001855 | + | 423 | WP_000479043.1 | phage minor tail protein G | - |
| C6P70_RS05705 () | 1001882..1002190 | + | 309 | WP_000532073.1 | phage tail assembly protein T | - |
| C6P70_RS05710 () | 1002234..1004879 | + | 2646 | WP_000918276.1 | phage tail tape measure protein | - |
| C6P70_RS05715 () | 1004876..1005205 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C6P70_RS05720 () | 1005205..1005903 | + | 699 | WP_001356552.1 | phage minor tail protein L | - |
| C6P70_RS05725 () | 1005914..1006657 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| C6P70_RS05730 () | 1006603..1007232 | + | 630 | WP_096851774.1 | tail assembly protein | - |
| C6P70_RS05735 () | 1007473..1010946 | + | 3474 | WP_000514990.1 | host specificity protein J | - |
| C6P70_RS05740 () | 1011014..1011613 | + | 600 | WP_001228289.1 | Ethanolamine ammonia-lyase heavy chain | VF |
| C6P70_RS05745 () | 1011678..1013000 | + | 1323 | WP_000279065.1 | ISNCY family transposase KIS | Transposase |
| C6P70_RS05750 () | 1013002..1013271 | + | 270 | WP_001023406.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6P70_RS05755 () | 1013384..1013959 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| C6P70_RS05760 () | 1014032..1014661 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| C6P70_RS05765 () | 1014743..1015384 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| C6P70_RS05770 () | 1015965..1016399 | - | 435 | WP_001082294.1 | universal stress protein UspF | - |
| C6P70_RS05775 () | 1016540..1017673 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|