MGE detailed information
MGE type: Prophage MGE length: 52339 bp
Accession: NZ_CP027388 Location: 1709518..1761856 Organism: Escherichia coli strain 2011C-4251 Replicon: chromosome
Accession: NZ_CP027388 Location: 1709518..1761856 Organism: Escherichia coli strain 2011C-4251 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P70_RS09570 () | 1704920..1705333 | + | 414 | WP_000920132.1 | hydroxyisourate hydrolase | - |
| C6P70_RS09575 () | 1705442..1706446 | + | 1005 | WP_000740100.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| C6P70_RS09580 () | 1706447..1707082 | + | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| C6P70_RS09585 () | 1707339..1707989 | + | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| C6P70_RS09590 () | 1708332..1708862 | + | 531 | WP_001079074.1 | cytochrome b | - |
| C6P70_RS09610 () | 1711016..1711104 | + | 89 | Protein_1765 | YkgJ family cysteine cluster protein | - |
| C6P70_RS09620 () | 1711520..1712089 | - | 570 | WP_000938105.1 | Pyridoxine/pyridoxamine 5'-phosphate oxidase | VF |
| C6P70_RS29645 () | 1712144..1713055 | - | 912 | Protein_1767 | tRNA threonylcarbamoyladenosine dehydratase | VF |
| C6P70_RS09635 () | 1713219..1713350 | - | 132 | WP_095111390.1 | tail fiber assembly protein | - |
| C6P70_RS09640 () | 1713376..1713663 | - | 288 | Protein_1769 | putative protein YbbN | VF |
| C6P70_RS09645 () | 1713697..1714677 | - | 981 | WP_000950813.1 | Putative quercetin 2,3-dioxygenase | VF |
| C6P70_RS09650 () | 1714854..1715123 | - | 270 | WP_001023997.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6P70_RS09655 () | 1715125..1716114 | - | 990 | WP_077759223.1 | ISNCY family transposase KIS | Transposase |
| C6P70_RS09665 () | 1717443..1717751 | - | 309 | Protein_1774 | prophage tail fiber N-terminal domain-containing protein | - |
| C6P70_RS09670 () | 1717816..1718439 | - | 624 | WP_001435161.1 | Tyrosine recombinase XerD | VF |
| C6P70_RS09675 () | 1718508..1721984 | - | 3477 | WP_000515001.1 | host specificity protein J | - |
| C6P70_RS09680 () | 1722118..1722645 | + | 528 | WP_000649829.1 | Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK | VF |
| C6P70_RS09690 () | 1722836..1723468 | - | 633 | WP_096220578.1 | tail assembly protein | - |
| C6P70_RS09695 () | 1723414..1724157 | - | 744 | WP_106913075.1 | C40 family peptidase | - |
| C6P70_RS09700 () | 1724163..1724861 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| C6P70_RS09705 () | 1724861..1725190 | - | 330 | WP_000847304.1 | phage tail protein | - |
| C6P70_RS09710 () | 1725187..1727766 | - | 2580 | WP_000082502.1 | phage tail tape measure protein | - |
| C6P70_RS09715 () | 1727747..1728160 | - | 414 | WP_000533415.1 | phage tail assembly protein T | - |
| C6P70_RS09720 () | 1728187..1728618 | - | 432 | WP_000479070.1 | phage minor tail protein G | - |
| C6P70_RS09725 () | 1728632..1729384 | - | 753 | WP_000106786.1 | phage tail protein | - |
| C6P70_RS09730 () | 1729392..1729787 | - | 396 | WP_000683066.1 | phage minor tail U family protein | - |
| C6P70_RS09735 () | 1729784..1730317 | - | 534 | WP_000975041.1 | phage tail protein | - |
| C6P70_RS09740 () | 1730332..1730685 | - | 354 | WP_001204554.1 | tail attachment protein | - |
| C6P70_RS09745 () | 1730678..1731061 | - | 384 | WP_000201512.1 | DNA-packaging protein FI | - |
| C6P70_RS09750 () | 1731113..1732141 | - | 1029 | WP_000522623.1 | major capsid protein | - |
| C6P70_RS09755 () | 1732199..1732546 | - | 348 | WP_000256723.1 | head decoration protein | - |
| C6P70_RS09760 () | 1732583..1734088 | - | 1506 | WP_078316698.1 | S49 family peptidase | - |
| C6P70_RS09765 () | 1734078..1735670 | - | 1593 | WP_001397759.1 | phage portal protein | - |
| C6P70_RS09770 () | 1735667..1735873 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| C6P70_RS09775 () | 1735857..1737785 | - | 1929 | WP_012816750.1 | phage terminase large subunit family protein | - |
| C6P70_RS09780 () | 1737757..1738266 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| C6P70_RS09790 () | 1738669..1738815 | + | 147 | Protein_1797 | DUF3950 domain-containing protein | - |
| C6P70_RS09795 () | 1738974..1739288 | - | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| C6P70_RS29650 () | 1739816..1740001 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6P70_RS09810 () | 1740223..1740336 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| C6P70_RS09815 () | 1740557..1741090 | - | 534 | WP_001003111.1 | lysozyme | - |
| C6P70_RS09825 () | 1741250..1741522 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| C6P70_RS09835 () | 1741778..1741993 | - | 216 | WP_024182511.1 | class II holin family protein | - |
| C6P70_RS09845 () | 1742433..1744283 | - | 1851 | WP_106913076.1 | SASA family carbohydrate esterase | - |
| C6P70_RS09870 () | 1745050..1745763 | - | 714 | WP_106913077.1 | helix-turn-helix domain-containing protein | - |
| C6P70_RS09875 () | 1745898..1746095 | - | 198 | WP_000917770.1 | hypothetical protein | - |
| C6P70_RS09880 () | 1746382..1747200 | - | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
| C6P70_RS09885 () | 1747352..1747723 | - | 372 | WP_000090265.1 | antitermination protein | - |
| C6P70_RS09890 () | 1747713..1748084 | - | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6P70_RS09895 () | 1748097..1749146 | - | 1050 | WP_001265133.1 | DUF968 domain-containing protein | - |
| C6P70_RS09900 () | 1749148..1749426 | - | 279 | WP_001341388.1 | hypothetical protein | - |
| C6P70_RS09905 () | 1749594..1749749 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6P70_RS09910 () | 1750354..1751127 | + | 774 | WP_000160654.1 | alpha/beta hydrolase | - |
| C6P70_RS09915 () | 1751479..1751892 | - | 414 | WP_001151233.1 | DUF977 family protein | - |
| C6P70_RS09920 () | 1751908..1752678 | - | 771 | WP_000450992.1 | DUF1627 domain-containing protein | - |
| C6P70_RS09925 () | 1752760..1753446 | - | 687 | WP_000788749.1 | ATP-binding protein | - |
| C6P70_RS09930 () | 1753453..1754568 | - | 1116 | WP_001205820.1 | hypothetical protein | - |
| C6P70_RS09935 () | 1754647..1755102 | + | 456 | WP_000273724.1 | hypothetical protein | - |
| C6P70_RS09940 () | 1755309..1755734 | - | 426 | WP_000693855.1 | Rha family transcriptional regulator | - |
| C6P70_RS09945 () | 1755718..1755990 | - | 273 | WP_000887453.1 | helix-turn-helix domain-containing protein | - |
| C6P70_RS09950 () | 1756099..1756500 | + | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| C6P70_RS09955 () | 1756528..1756719 | + | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| C6P70_RS09960 () | 1756719..1757006 | + | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6P70_RS09965 () | 1757283..1757438 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| C6P70_RS09975 () | 1757580..1757969 | + | 390 | WP_000394511.1 | hypothetical protein | - |
| C6P70_RS09980 () | 1758156..1758341 | - | 186 | WP_001133046.1 | hypothetical protein | - |
| C6P70_RS09990 () | 1758915..1759103 | + | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| C6P70_RS09995 () | 1759100..1759291 | + | 192 | WP_001098307.1 | DUF1482 family protein | - |
| C6P70_RS10000 () | 1759385..1761856 | + | 2472 | WP_000034468.1 | exonuclease | - |
| C6P70_RS10005 () | 1761924..1762166 | + | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| C6P70_RS10010 () | 1762144..1763163 | + | 1020 | WP_001299351.1 | tyrosine-type recombinase/integrase | - |
| C6P70_RS10015 () | 1763571..1764230 | + | 660 | WP_000375136.1 | FtsH protease modulator YccA | - |
| C6P70_RS10020 () | 1764321..1764650 | + | 330 | WP_000904444.1 | sulfurtransferase TusE | - |
| C6P70_RS10025 () | 1764647..1764925 | - | 279 | WP_000048255.1 | acylphosphatase | - |
| C6P70_RS10030 () | 1765020..1766210 | + | 1191 | WP_000116292.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| C6P70_RS10035 () | 1766268..1766585 | + | 318 | WP_001295356.1 | heat shock protein HspQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|