MGE detailed information
MGE type: Prophage MGE length: 113140 bp
Accession: NZ_CP027387 Location: 4602017..4715156 Organism: Escherichia coli strain 2014C-3057 Replicon: chromosome
Accession: NZ_CP027387 Location: 4602017..4715156 Organism: Escherichia coli strain 2014C-3057 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P73_RS24505 () | 4598267..4600692 | - | 2426 | Protein_4424 | dimethyl sulfoxide reductase subunit A | - |
| C6P73_RS24510 () | 4600891..4601196 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| C6P73_RS24515 () | 4601304..4602014 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| C6P73_RS24520 () | 4602017..4602577 | - | 561 | WP_001138576.1 | spermidine N1-acetyltransferase | - |
| C6P73_RS24525 () | 4602612..4602953 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| C6P73_RS24530 () | 4603088..4603414 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| C6P73_RS24540 () | 4603620..4604834 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C6P73_RS24545 () | 4604846..4605865 | + | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| C6P73_RS24555 () | 4606053..4607333 | - | 1281 | WP_000877011.1 | site-specific integrase | - |
| C6P73_RS24560 () | 4607368..4607598 | - | 231 | Protein_4433 | excisionase family protein | - |
| C6P73_RS24565 () | 4607588..4608265 | + | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| C6P73_RS24570 () | 4608265..4608612 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C6P73_RS24575 () | 4608632..4610203 | + | 1572 | WP_000381395.1 | IS66 family transposase | - |
| C6P73_RS24580 () | 4610234..4610326 | - | 93 | Protein_4437 | excisionase family protein | - |
| C6P73_RS24585 () | 4610399..4612870 | - | 2472 | WP_106875080.1 | exonuclease | - |
| C6P73_RS24590 () | 4612964..4613155 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| C6P73_RS24595 () | 4613152..4613340 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| C6P73_RS24600 () | 4613827..4614402 | - | 576 | WP_000347171.1 | hypothetical protein | - |
| C6P73_RS24605 () | 4614404..4614559 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| C6P73_RS24610 () | 4614752..4615159 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| C6P73_RS24615 () | 4615237..4615464 | + | 228 | WP_000476993.1 | transcriptional regulator | - |
| C6P73_RS24620 () | 4615448..4615969 | + | 522 | WP_000705349.1 | hypothetical protein | - |
| C6P73_RS24625 () | 4615950..4616915 | + | 966 | WP_000054507.1 | hypothetical protein | - |
| C6P73_RS24630 () | 4616956..4617375 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| C6P73_RS24635 () | 4617409..4618749 | + | 1341 | WP_000589012.1 | ISNCY family transposase | - |
| C6P73_RS24640 () | 4619186..4619518 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| C6P73_RS24645 () | 4619721..4620026 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| C6P73_RS24650 () | 4620051..4620290 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C6P73_RS24655 () | 4620290..4620577 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C6P73_RS24660 () | 4620649..4620804 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6P73_RS24665 () | 4621021..4621272 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| C6P73_RS24670 () | 4621339..4621617 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| C6P73_RS24675 () | 4621619..4622668 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| C6P73_RS24680 () | 4622682..4623434 | + | 753 | WP_001047133.1 | antitermination protein | - |
| C6P73_RS31225 () | 4623712..4623801 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| C6P73_RS24685 () | 4623856..4624068 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| C6P73_RS24690 () | 4624369..4624584 | + | 216 | WP_000066483.1 | cold shock-like protein CspB | - |
| C6P73_RS31785 () | 4624948..4625118 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| C6P73_RS24695 () | 4625338..4625553 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| C6P73_RS24700 () | 4625558..4625869 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| C6P73_RS24705 () | 4625866..4626399 | + | 534 | WP_001092971.1 | lysozyme | - |
| C6P73_RS24710 () | 4626396..4626893 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| C6P73_RS24715 () | 4627256..4627468 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C6P73_RS24720 () | 4627479..4627667 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| C6P73_RS31230 () | 4627670..4627735 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| C6P73_RS31235 () | 4627815..4627970 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| C6P73_RS24730 () | 4628142..4628315 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C6P73_RS24735 () | 4628467..4628877 | - | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| C6P73_RS24745 () | 4629178..4629384 | + | 207 | WP_001031435.1 | hypothetical protein | - |
| C6P73_RS24750 () | 4629945..4630484 | + | 540 | WP_000421825.1 | DUF1441 family protein | - |
| C6P73_RS24755 () | 4630493..4632592 | + | 2100 | WP_000507036.1 | phage terminase large subunit family protein | - |
| C6P73_RS24760 () | 4632589..4632801 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| C6P73_RS24765 () | 4632801..4634309 | + | 1509 | WP_000985929.1 | phage portal protein | - |
| C6P73_RS24770 () | 4634254..4636281 | + | 2028 | WP_001136588.1 | Clp protease ClpP | - |
| C6P73_RS24775 () | 4636368..4636691 | + | 324 | WP_001097041.1 | DUF2190 family protein | - |
| C6P73_RS24780 () | 4636684..4636959 | + | 276 | WP_001283148.1 | DNA breaking-rejoining protein | - |
| C6P73_RS24785 () | 4636971..4637549 | + | 579 | WP_000677128.1 | phage tail protein | - |
| C6P73_RS24790 () | 4637546..4637947 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| C6P73_RS24795 () | 4637958..4638701 | + | 744 | WP_000211132.1 | Ig domain-containing protein | - |
| C6P73_RS24800 () | 4638762..4639148 | + | 387 | WP_001341514.1 | phage minor tail protein G | - |
| C6P73_RS24805 () | 4639157..4639486 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| C6P73_RS24810 () | 4639458..4642523 | + | 3066 | WP_000372024.1 | phage tail tape measure protein | - |
| C6P73_RS24815 () | 4642523..4642852 | + | 330 | WP_000447251.1 | phage tail protein | - |
| C6P73_RS24820 () | 4642862..4643560 | + | 699 | WP_001152371.1 | phage minor tail protein L | - |
| C6P73_RS24825 () | 4643565..4644308 | + | 744 | WP_000140707.1 | C40 family peptidase | - |
| C6P73_RS24830 () | 4644206..4644853 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| C6P73_RS24835 () | 4644914..4648327 | + | 3414 | WP_000515505.1 | host specificity protein J | - |
| C6P73_RS24840 () | 4648398..4648997 | + | 600 | WP_001233114.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| C6P73_RS24845 () | 4649062..4652010 | + | 2949 | WP_100005742.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6P73_RS24850 () | 4652072..4653228 | + | 1157 | WP_085948186.1 | IS3-like element IS600 family transposase | - |
| C6P73_RS24855 () | 4653289..4653864 | + | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| C6P73_RS24860 () | 4653962..4654552 | - | 591 | WP_000086514.1 | recombinase family protein | - |
| C6P73_RS24865 () | 4654869..4655102 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C6P73_RS31240 () | 4655171..4655284 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| C6P73_RS24875 () | 4655933..4657228 | - | 1296 | WP_001206147.1 | site-specific integrase | - |
| C6P73_RS24880 () | 4657248..4657499 | - | 252 | WP_000005551.1 | excisionase family protein | - |
| C6P73_RS24885 () | 4657572..4660034 | - | 2463 | WP_000102117.1 | exonuclease | - |
| C6P73_RS24890 () | 4660127..4660315 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| C6P73_RS24895 () | 4660312..4660500 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| C6P73_RS24905 () | 4661065..4661274 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C6P73_RS24910 () | 4661275..4661913 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C6P73_RS24915 () | 4661925..4662077 | - | 153 | WP_000380321.1 | DUF1391 family protein | - |
| C6P73_RS24920 () | 4662244..4662651 | - | 408 | WP_000379972.1 | helix-turn-helix domain-containing protein | - |
| C6P73_RS24925 () | 4662735..4662965 | + | 231 | WP_000920571.1 | dicB transcriptional regulator DicC | - |
| C6P73_RS24930 () | 4662949..4663470 | + | 522 | WP_000705368.1 | hypothetical protein | - |
| C6P73_RS24935 () | 4663451..4664416 | + | 966 | WP_000054520.1 | hypothetical protein | - |
| C6P73_RS24940 () | 4664423..4665163 | + | 741 | WP_000790460.1 | ATP-binding protein | - |
| C6P73_RS24945 () | 4665193..4665954 | + | 762 | WP_000450895.1 | DUF1627 domain-containing protein | - |
| C6P73_RS24950 () | 4666014..4666199 | + | 186 | WP_000215512.1 | hypothetical protein | - |
| C6P73_RS24955 () | 4666551..4667102 | + | 552 | WP_000211993.1 | ORF6N domain-containing protein | - |
| C6P73_RS24965 () | 4667374..4667529 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6P73_RS24970 () | 4667632..4667949 | - | 318 | WP_000042395.1 | DNA-binding transcriptional regulator | - |
| C6P73_RS24975 () | 4667942..4668313 | - | 372 | WP_001217944.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6P73_RS24980 () | 4668537..4668764 | + | 228 | WP_001452497.1 | hypothetical protein | - |
| C6P73_RS24985 () | 4668818..4669087 | + | 270 | WP_012817785.1 | hypothetical protein | - |
| C6P73_RS24990 () | 4669089..4670138 | + | 1050 | WP_001375683.1 | DUF968 domain-containing protein | - |
| C6P73_RS24995 () | 4670152..4670904 | + | 753 | WP_001047111.1 | antitermination protein | - |
| C6P73_RS25005 () | 4671219..4671368 | + | 150 | Protein_4521 | DNA methylase | - |
| C6P73_RS25025 () | 4671749..4671973 | + | 225 | WP_000735807.1 | hypothetical protein | - |
| C6P73_RS25030 () | 4672026..4672235 | + | 210 | WP_000498121.1 | hypothetical protein | - |
| C6P73_RS25035 () | 4672425..4672856 | + | 432 | WP_001299632.1 | tellurite resistance protein | - |
| C6P73_RS25040 () | 4672853..4673108 | + | 256 | Protein_4525 | DUF3927 family protein | - |
| C6P73_RS25050 () | 4673335..4675185 | + | 1851 | WP_032325211.1 | SASA family carbohydrate esterase | - |
| C6P73_RS25055 () | 4675591..4676747 | + | 1157 | WP_085948186.1 | IS3-like element IS600 family transposase | - |
| C6P73_RS25065 () | 4676891..4677106 | + | 216 | WP_024165672.1 | class II holin family protein | - |
| C6P73_RS25070 () | 4677110..4677901 | + | 792 | WP_001041949.1 | DUF1327 domain-containing protein | - |
| C6P73_RS25075 () | 4678413..4678946 | + | 534 | WP_000992045.1 | lysozyme | - |
| C6P73_RS25080 () | 4679167..4679276 | + | 110 | Protein_4531 | hypothetical protein | - |
| C6P73_RS31255 () | 4679498..4679683 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C6P73_RS25095 () | 4680211..4680525 | + | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| C6P73_RS25100 () | 4680607..4680831 | - | 225 | WP_001431375.1 | YlcI/YnfO family protein | - |
| C6P73_RS25110 () | 4681218..4681763 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C6P73_RS25115 () | 4681738..4683663 | + | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| C6P73_RS25120 () | 4683660..4683866 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C6P73_RS25125 () | 4683863..4685464 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C6P73_RS25130 () | 4685445..4686764 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C6P73_RS25135 () | 4686774..4687106 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C6P73_RS25140 () | 4687162..4688187 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| C6P73_RS25145 () | 4688229..4688624 | + | 396 | WP_000158901.1 | DNA-packaging protein FI | - |
| C6P73_RS25150 () | 4688636..4688989 | + | 354 | WP_000752969.1 | head-tail joining protein | - |
| C6P73_RS25155 () | 4689004..4689537 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C6P73_RS25160 () | 4689534..4689929 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C6P73_RS25165 () | 4689937..4690689 | + | 753 | WP_000235099.1 | Ig domain-containing protein | - |
| C6P73_RS25170 () | 4690703..4691125 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| C6P73_RS25175 () | 4691152..4691565 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C6P73_RS25180 () | 4691546..4694158 | + | 2613 | WP_000081792.1 | phage tail tape measure protein | - |
| C6P73_RS25185 () | 4694155..4694484 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C6P73_RS25190 () | 4694484..4695182 | + | 699 | WP_001357740.1 | phage minor tail protein L | - |
| C6P73_RS25195 () | 4695193..4695936 | + | 744 | WP_000194802.1 | C40 family peptidase | - |
| C6P73_RS25200 () | 4695882..4696514 | + | 633 | WP_133253573.1 | tail assembly protein | - |
| C6P73_RS25205 () | 4696760..4700236 | + | 3477 | WP_106875081.1 | host specificity protein J | - |
| C6P73_RS25210 () | 4700305..4700928 | + | 624 | WP_001456919.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| C6P73_RS25215 () | 4700993..4702306 | + | 1314 | WP_000279009.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6P73_RS25220 () | 4702308..4702577 | + | 270 | WP_001023433.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6P73_RS25230 () | 4702980..4703993 | + | 1014 | WP_122993102.1 | M85 family metallopeptidase | - |
| C6P73_RS25240 () | 4704364..4704606 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C6P73_RS25245 () | 4704738..4706021 | + | 1284 | Protein_4560 | MHS family MFS transporter YdfJ | - |
| C6P73_RS25250 () | 4706110..4707570 | + | 1461 | Protein_4561 | mannitol dehydrogenase family protein | - |
| C6P73_RS25255 () | 4707606..4707809 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C6P73_RS25260 () | 4707987..4708673 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C6P73_RS25265 () | 4708762..4709508 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C6P73_RS25275 () | 4709645..4711690 | + | 2046 | WP_001341522.1 | peptidyl-dipeptidase Dcp | - |
| C6P73_RS25285 () | 4711735..4712253 | - | 519 | WP_001024559.1 | 2-oxo-tetronate isomerase | - |
| C6P73_RS25290 () | 4712529..4712921 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| C6P73_RS25295 () | 4713176..4713787 | + | 612 | Protein_4568 | diguanylate cyclase DgcZ | - |
| C6P73_RS25300 () | 4713842..4714539 | + | 698 | Protein_4569 | IS1 family transposase | - |
| C6P73_RS25305 () | 4714552..4714842 | + | 291 | Protein_4570 | diguanylate cyclase DgcZ | - |
| C6P73_RS31790 () | 4714957..4715061 | - | 105 | WP_211180496.1 | protein MgtT | - |
| C6P73_RS25310 () | 4715061..4715156 | - | 96 | WP_000901367.1 | protein MgtS | - |
| C6P73_RS25315 () | 4715283..4716470 | - | 1188 | WP_001052938.1 | efflux MFS transporter YdeE | - |
| C6P73_RS25320 () | 4716665..4717564 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| C6P73_RS25325 () | 4717609..4718307 | - | 699 | WP_000577179.1 | GntR family transcriptional regulator | - |
| C6P73_RS25330 () | 4718506..4718817 | + | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|