MGE detailed information
MGE type: Prophage MGE length: 70980 bp
Accession: NZ_CP027387 Location: 4272887..4343866 Organism: Escherichia coli strain 2014C-3057 Replicon: chromosome
Accession: NZ_CP027387 Location: 4272887..4343866 Organism: Escherichia coli strain 2014C-3057 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P73_RS22620 () | 4268970..4269611 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| C6P73_RS22625 () | 4269667..4270845 | - | 1179 | WP_000173494.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| C6P73_RS22630 () | 4270979..4271269 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| C6P73_RS22635 () | 4271336..4271692 | + | 357 | WP_001295500.1 | protein YebF | - |
| C6P73_RS22640 () | 4272019..4272678 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| C6P73_RS22645 () | 4272887..4274947 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| C6P73_RS22650 () | 4274944..4275606 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| C6P73_RS22655 () | 4275630..4276286 | - | 657 | WP_000011658.1 | carbon-nitrogen hydrolase family protein | - |
| C6P73_RS22660 () | 4276388..4276618 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| C6P73_RS22665 () | 4276757..4277131 | + | 375 | WP_000204699.1 | CopC domain-containing protein YobA | - |
| C6P73_RS22670 () | 4277135..4278007 | + | 873 | WP_000879280.1 | copper homeostasis membrane protein CopD | - |
| C6P73_RS22675 () | 4278020..4278361 | + | 342 | WP_000976492.1 | YebY family protein | - |
| C6P73_RS22680 () | 4278714..4279829 | - | 1116 | WP_001189092.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| C6P73_RS22685 () | 4279795..4280076 | - | 282 | WP_001443927.1 | excisionase | - |
| C6P73_RS22690 () | 4280183..4280371 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 4280187..4280365 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 4280187..4280365 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 4280187..4280365 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| - () | 4280187..4280365 | + | 179 | NuclAT_1 | - | Antitoxin Detail |
| C6P73_RS22695 () | 4280364..4280558 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C6P73_RS22700 () | 4280615..4281424 | - | 810 | WP_000166317.1 | recombination protein RecT | - |
| C6P73_RS22705 () | 4281417..4284068 | - | 2652 | WP_000105101.1 | exodeoxyribonuclease VIII | - |
| C6P73_RS22710 () | 4284167..4284442 | - | 276 | WP_001307773.1 | hypothetical protein | - |
| C6P73_RS22715 () | 4284516..4284692 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| C6P73_RS22720 () | 4284686..4284907 | - | 222 | WP_000560218.1 | killing protein KilR | - |
| C6P73_RS22725 () | 4285328..4285480 | - | 153 | WP_001427316.1 | DUF1391 family protein | - |
| C6P73_RS22730 () | 4285767..4286045 | - | 279 | WP_001448501.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6P73_RS22735 () | 4286047..4286238 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C6P73_RS22740 () | 4286259..4286630 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| C6P73_RS22745 () | 4286728..4287030 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C6P73_RS22750 () | 4287027..4287452 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C6P73_RS22755 () | 4287475..4288437 | + | 963 | WP_001444941.1 | helix-turn-helix domain-containing protein | - |
| C6P73_RS22760 () | 4288444..4289185 | + | 742 | Protein_4101 | ATP-binding protein | - |
| C6P73_RS22765 () | 4289211..4289972 | + | 762 | WP_000450872.1 | DUF1627 domain-containing protein | - |
| C6P73_RS22770 () | 4290005..4290286 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C6P73_RS22775 () | 4290283..4290510 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C6P73_RS22780 () | 4290503..4290814 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C6P73_RS22785 () | 4290942..4291160 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C6P73_RS22790 () | 4291162..4291719 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| C6P73_RS22795 () | 4292010..4292165 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C6P73_RS22800 () | 4292285..4292629 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C6P73_RS22805 () | 4292751..4293023 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C6P73_RS22810 () | 4293025..4294074 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C6P73_RS22815 () | 4294087..4294461 | + | 375 | WP_001217413.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6P73_RS22820 () | 4294458..4295279 | + | 822 | WP_000762928.1 | antitermination protein | - |
| C6P73_RS22825 () | 4295517..4295879 | + | 363 | Protein_4114 | tellurite resistance TerB family protein | - |
| C6P73_RS22830 () | 4295876..4296128 | + | 253 | Protein_4115 | DUF3927 family protein | - |
| C6P73_RS22835 () | 4296450..4298300 | + | 1851 | WP_000143050.1 | SASA family carbohydrate esterase | - |
| C6P73_RS22845 () | 4298739..4298954 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| C6P73_RS22850 () | 4298954..4299451 | + | 498 | WP_000075132.1 | lysozyme RrrD | - |
| C6P73_RS22855 () | 4299448..4299885 | + | 438 | WP_000092325.1 | lysis protein | - |
| C6P73_RS22860 () | 4300035..4300652 | + | 618 | WP_000881326.1 | Rha family transcriptional regulator | - |
| C6P73_RS22870 () | 4300840..4301034 | - | 195 | WP_001307652.1 | YlcI/YnfO family protein | - |
| C6P73_RS22880 () | 4301423..4301968 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| C6P73_RS22885 () | 4301943..4303868 | + | 1926 | WP_001027379.1 | phage terminase large subunit family protein | - |
| C6P73_RS22890 () | 4303865..4304071 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C6P73_RS22895 () | 4304068..4305669 | + | 1602 | WP_001443752.1 | phage portal protein | - |
| C6P73_RS22900 () | 4305650..4306969 | + | 1320 | WP_000123251.1 | S49 family peptidase | - |
| C6P73_RS22905 () | 4306979..4307311 | + | 333 | WP_001365129.1 | head decoration protein | - |
| C6P73_RS22910 () | 4307367..4308392 | + | 1026 | WP_000063258.1 | major capsid protein | - |
| C6P73_RS22915 () | 4308434..4308829 | + | 396 | WP_000158897.1 | DNA-packaging protein FI | - |
| C6P73_RS22920 () | 4308841..4309194 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| C6P73_RS22925 () | 4309206..4309784 | + | 579 | WP_000975096.1 | phage tail protein | - |
| C6P73_RS22930 () | 4309781..4310176 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| C6P73_RS22935 () | 4310184..4310936 | + | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| C6P73_RS22940 () | 4310950..4311372 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| C6P73_RS22945 () | 4311399..4311812 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C6P73_RS22950 () | 4311793..4314405 | + | 2613 | WP_000081762.1 | phage tail tape measure protein | - |
| C6P73_RS22955 () | 4314402..4314731 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C6P73_RS22960 () | 4314731..4315429 | + | 699 | WP_032363306.1 | phage minor tail protein L | - |
| C6P73_RS22965 () | 4315440..4316183 | + | 744 | WP_053892383.1 | C40 family peptidase | - |
| C6P73_RS22970 () | 4316129..4316761 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C6P73_RS22980 () | 4317105..4320500 | + | 3396 | WP_064551593.1 | host specificity protein J | - |
| C6P73_RS22985 () | 4320703..4321044 | + | 342 | WP_106875079.1 | transposase | - |
| C6P73_RS22990 () | 4321041..4321388 | + | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C6P73_RS22995 () | 4321437..4322975 | + | 1539 | WP_000099148.1 | IS66-like element ISEc22 family transposase | - |
| C6P73_RS23000 () | 4323031..4323630 | + | 600 | WP_001230428.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| C6P73_RS23005 () | 4323695..4325008 | + | 1314 | WP_000268926.1 | phage tail protein | - |
| C6P73_RS23010 () | 4325010..4325279 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6P73_RS23015 () | 4325420..4326295 | + | 876 | WP_000491545.1 | hypothetical protein | - |
| C6P73_RS31220 () | 4326520..4327170 | - | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| C6P73_RS31675 () | 4327174..4327440 | - | 267 | Protein_4150 | hypothetical protein | - |
| C6P73_RS23035 () | 4328125..4328781 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| C6P73_RS23040 () | 4328782..4328973 | - | 192 | WP_001296140.1 | YebW family protein | - |
| C6P73_RS23045 () | 4329078..4329314 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| C6P73_RS23050 () | 4329432..4330871 | - | 1440 | WP_000057024.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| C6P73_RS23055 () | 4330951..4333584 | - | 2634 | WP_001299674.1 | lipid-binding membrane homeostasis protein YebT | - |
| C6P73_RS23060 () | 4333553..4334836 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| C6P73_RS23065 () | 4334966..4335463 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| C6P73_RS23070 () | 4335560..4336258 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| C6P73_RS23075 () | 4336278..4338326 | + | 2049 | WP_001431407.1 | carboxy terminal-processing peptidase | - |
| C6P73_RS23080 () | 4338518..4339399 | + | 882 | WP_000984517.1 | protease HtpX | - |
| C6P73_RS23085 () | 4339445..4340818 | - | 1374 | WP_001127210.1 | MFS transporter | - |
| C6P73_RS23090 () | 4340995..4341786 | + | 792 | WP_001262174.1 | DNA-binding transcriptional regulator KdgR | - |
| C6P73_RS23095 () | 4341929..4342168 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| C6P73_RS23100 () | 4342327..4342470 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| C6P73_RS23105 () | 4342545..4342832 | + | 288 | WP_001006866.1 | YebO family protein | - |
| C6P73_RS23115 () | 4343501..4343644 | + | 144 | WP_001295496.1 | YobF family protein | - |
| C6P73_RS23120 () | 4343657..4343866 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| C6P73_RS23125 () | 4344032..4344841 | + | 810 | WP_000010107.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| C6P73_RS23130 () | 4344838..4345404 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| C6P73_RS23140 () | 4345833..4346291 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| C6P73_RS23145 () | 4346346..4347197 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| C6P73_RS23150 () | 4347210..4348010 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|