MGE detailed information
MGE type: Mobilizable plasmid MGE length: 27224 bp
Accession: NZ_CP027384 Location: 1..27224 Organism: Escherichia coli strain 2013C-3250 Replicon: plasmid unnamed4
Accession: NZ_CP027384 Location: 1..27224 Organism: Escherichia coli strain 2013C-3250 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYN27_RS29745 () | 1..1468 | - | 1468 | Protein_0 | conjugative relaxase | - |
| AYN27_RS29750 () | 1468..3621 | - | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| AYN27_RS29755 () | 3874..4605 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| AYN27_RS29760 () | 4619..5128 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| AYN27_RS29765 () | 5125..6792 | - | 1668 | Protein_4 | conjugal transfer protein TraG | - |
| AYN27_RS29770 () | 6845..8058 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| AYN27_RS29775 () | 8100..9263 | - | 1164 | Protein_6 | conjugal transfer mating pair stabilization protein TraG | - |
| AYN27_RS29780 () | 9260..9859 | - | 600 | Protein_7 | conjugal transfer protein TraH | - |
| AYN27_RS29785 () | 9840..9962 | - | 123 | WP_001369729.1 | DUF2689 domain-containing protein | - |
| AYN27_RS29790 () | 9949..10539 | - | 591 | WP_000002783.1 | conjugal transfer protein TraP | - |
| AYN27_RS29795 () | 10529..11956 | - | 1428 | WP_000146670.1 | conjugal transfer protein TraB | - |
| AYN27_RS29800 () | 11956..12660 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AYN27_RS29805 () | 12671..13237 | - | 567 | WP_106914165.1 | type IV conjugative transfer system protein TraE | - |
| AYN27_RS29810 () | 13259..13571 | - | 313 | Protein_13 | type IV conjugative transfer system protein TraL | - |
| AYN27_RS29815 () | 13586..13945 | - | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| AYN27_RS29820 () | 13978..14373 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| AYN27_RS29825 () | 14472..15163 | - | 692 | Protein_16 | conjugal transfer transcriptional regulator TraJ | - |
| AYN27_RS29830 () | 15350..15733 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| AYN27_RS29835 () | 16147..16656 | + | 510 | Protein_18 | transglycosylase SLT domain-containing protein | - |
| AYN27_RS29840 () | 16953..17774 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| AYN27_RS29845 () | 17895..18182 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| AYN27_RS31495 () | 18526..18750 | + | 225 | WP_001427866.1 | hypothetical protein | - |
| AYN27_RS29865 () | 19104..19262 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 19306..19530 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19306..19530 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19306..19530 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 19306..19530 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| AYN27_RS31500 () | 19342..19530 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| AYN27_RS29870 () | 19499..20263 | - | 765 | Protein_24 | plasmid SOS inhibition protein A | - |
| AYN27_RS29875 () | 20260..20695 | - | 436 | Protein_25 | conjugation system SOS inhibitor PsiB | - |
| AYN27_RS29880 () | 20750..22710 | - | 1961 | Protein_26 | ParB/RepB/Spo0J family partition protein | - |
| AYN27_RS29885 () | 22769..23002 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| AYN27_RS29895 () | 23128..23586 | - | 459 | WP_106914166.1 | single-stranded DNA-binding protein | - |
| AYN27_RS29910 () | 24232..24482 | - | 251 | Protein_29 | hypothetical protein | - |
| AYN27_RS29915 () | 24600..25049 | - | 450 | Protein_30 | class I SAM-dependent methyltransferase | - |
| AYN27_RS29920 () | 25095..26463 | - | 1369 | Protein_31 | DUF3560 domain-containing protein | - |
| AYN27_RS29925 () | 26515..26744 | - | 230 | Protein_32 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|