MGE detailed information
MGE type: Prophage MGE length: 61261 bp
Accession: NZ_CP027380 Location: 2877285..2938545 Organism: Escherichia coli strain 2013C-3250 Replicon: chromosome
Accession: NZ_CP027380 Location: 2877285..2938545 Organism: Escherichia coli strain 2013C-3250 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYN27_RS15850 () | 2873459..2874688 | - | 1230 | WP_000359442.1 | peptidase T | - |
| AYN27_RS15860 () | 2874938..2876074 | + | 1137 | WP_000531601.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| AYN27_RS15865 () | 2876058..2876921 | + | 864 | WP_000799400.1 | spermidine/putrescine ABC transporter permease PotB | - |
| AYN27_RS15875 () | 2877285..2878646 | + | 1362 | WP_000938117.1 | hypothetical protein | VF |
| AYN27_RS15880 () | 2878707..2878982 | + | 276 | WP_001303921.1 | hypothetical protein | - |
| AYN27_RS15885 () | 2879062..2879175 | - | 114 | Protein_2944 | non-LEE encoded effector protein NleB | - |
| AYN27_RS31380 () | 2879210..2879428 | - | 219 | Protein_2945 | IS256 family transposase ISSoEn2 | Transposase |
| AYN27_RS31385 () | 2879428..2879580 | + | 153 | Protein_2946 | IS256 family transposase ISSoEn2 | Transposase |
| AYN27_RS15895 () | 2879957..2883358 | - | 3402 | WP_001369471.1 | hypothetical protein | VF |
| AYN27_RS15900 () | 2883949..2886297 | - | 2349 | WP_001301673.1 | E3 ubiquitin-protein ligase SopA | VF |
| AYN27_RS31060 () | 2886317..2886406 | - | 90 | WP_115801847.1 | hypothetical protein | - |
| AYN27_RS31065 () | 2886419..2886511 | - | 93 | Protein_2950 | tail assembly protein | - |
| AYN27_RS15905 () | 2886513..2886782 | - | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| AYN27_RS15910 () | 2886784..2888106 | - | 1323 | WP_000268887.1 | ISNCY family transposase KIS | Transposase |
| AYN27_RS15915 () | 2888171..2888770 | - | 600 | WP_001230459.1 | Outer membrane protein X | VF |
| AYN27_RS15920 () | 2888837..2892316 | - | 3480 | WP_000514853.1 | host specificity protein J | - |
| AYN27_RS15925 () | 2892553..2893185 | - | 633 | WP_122996286.1 | tail assembly protein | - |
| AYN27_RS15930 () | 2893131..2893868 | - | 738 | WP_000967279.1 | C40 family peptidase | - |
| AYN27_RS15935 () | 2893923..2894845 | - | 923 | Protein_2957 | phage antirepressor Ant | - |
| AYN27_RS15940 () | 2894916..2895119 | - | 204 | WP_106914134.1 | toxin-antitoxin system HicB family antitoxin | - |
| AYN27_RS15945 () | 2895227..2895547 | + | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| AYN27_RS15950 () | 2895564..2896262 | - | 699 | WP_097601926.1 | phage minor tail protein L | - |
| AYN27_RS15955 () | 2896262..2896603 | - | 342 | WP_000807928.1 | phage tail protein | - |
| AYN27_RS15960 () | 2896596..2899838 | - | 3243 | WP_106914135.1 | phage tail tape measure protein | - |
| AYN27_RS15965 () | 2899890..2900099 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| AYN27_RS15970 () | 2900195..2900569 | - | 375 | WP_106914136.1 | phage tail assembly chaperone | - |
| AYN27_RS15975 () | 2900575..2901291 | - | 717 | WP_001275472.1 | tail protein | - |
| AYN27_RS15980 () | 2901358..2901702 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| AYN27_RS15985 () | 2901699..2902145 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| AYN27_RS15990 () | 2902142..2902492 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| AYN27_RS15995 () | 2902502..2902828 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| AYN27_RS16000 () | 2902825..2905571 | - | 2747 | Protein_2970 | phage portal protein | - |
| AYN27_RS16005 () | 2905517..2905738 | - | 222 | WP_001063099.1 | hypothetical protein | - |
| AYN27_RS16010 () | 2905783..2907720 | - | 1938 | WP_000172984.1 | phage major capsid protein | - |
| AYN27_RS16015 () | 2907784..2909445 | - | 1662 | WP_001369319.1 | terminase large subunit | - |
| AYN27_RS16020 () | 2909442..2910005 | - | 564 | WP_000958415.1 | terminase small subunit | - |
| AYN27_RS16030 () | 2910296..2910661 | - | 366 | WP_000279788.1 | HNH endonuclease | - |
| AYN27_RS16035 () | 2910703..2910930 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| AYN27_RS31070 () | 2911355..2911540 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| AYN27_RS31080 () | 2911768..2911914 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| AYN27_RS16045 () | 2911914..2912483 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| AYN27_RS16050 () | 2912754..2913287 | - | 534 | WP_000992167.1 | lysozyme | - |
| AYN27_RS16055 () | 2913338..2913682 | - | 345 | WP_000731236.1 | YdfR family protein | - |
| AYN27_RS16060 () | 2913687..2913902 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| AYN27_RS16070 () | 2914341..2916191 | - | 1851 | WP_000874287.1 | DUF1737 domain-containing protein | - |
| AYN27_RS16090 () | 2916988..2918046 | - | 1059 | WP_000935544.1 | site-specific DNA-methyltransferase | - |
| AYN27_RS31085 () | 2918197..2918394 | - | 198 | WP_000917750.1 | hypothetical protein | - |
| AYN27_RS16100 () | 2918636..2919166 | - | 531 | WP_000640048.1 | DUF1133 family protein | - |
| AYN27_RS16105 () | 2919175..2919540 | - | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AYN27_RS16110 () | 2919541..2920596 | - | 1056 | WP_001369253.1 | DUF968 domain-containing protein | - |
| AYN27_RS16115 () | 2920598..2920870 | - | 273 | WP_012817871.1 | hypothetical protein | - |
| AYN27_RS16125 () | 2921038..2921178 | - | 141 | WP_072058819.1 | type I toxin-antitoxin system Hok family toxin | - |
| AYN27_RS16130 () | 2921216..2922429 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| AYN27_RS16135 () | 2922469..2922885 | - | 417 | WP_023981635.1 | DUF977 family protein | - |
| AYN27_RS16140 () | 2922926..2923888 | - | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| AYN27_RS16145 () | 2923911..2924336 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| AYN27_RS16150 () | 2924333..2924635 | - | 303 | WP_001444689.1 | transcriptional regulator | - |
| AYN27_RS16155 () | 2924733..2925104 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| AYN27_RS16160 () | 2925125..2925316 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| AYN27_RS16165 () | 2925318..2925596 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AYN27_RS16175 () | 2925892..2926281 | + | 390 | WP_001447517.1 | hypothetical protein | - |
| AYN27_RS16180 () | 2926322..2926540 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| AYN27_RS16190 () | 2927024..2927212 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| AYN27_RS16195 () | 2927209..2927400 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| AYN27_RS16200 () | 2927493..2929958 | + | 2466 | WP_000048442.1 | exonuclease | - |
| AYN27_RS16205 () | 2930020..2930289 | + | 270 | WP_000003742.1 | excisionase | - |
| AYN27_RS16210 () | 2930258..2931376 | + | 1119 | WP_000074981.1 | hypothetical protein ; Integrase | Integrase |
| AYN27_RS16215 () | 2931543..2932337 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| AYN27_RS16220 () | 2932334..2933380 | + | 1047 | WP_000759338.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| AYN27_RS16225 () | 2933438..2933899 | + | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| AYN27_RS16230 () | 2933896..2934684 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| AYN27_RS16235 () | 2934823..2935644 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| AYN27_RS16240 () | 2935660..2936571 | - | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| AYN27_RS16245 () | 2936600..2937844 | - | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| AYN27_RS16250 () | 2937844..2938545 | - | 702 | WP_001033694.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| AYN27_RS16255 () | 2938538..2939737 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| AYN27_RS16260 () | 2939999..2941072 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|