MGE detailed information
MGE type: Prophage MGE length: 71315 bp
Accession: NZ_CP027373 Location: 53196..124510 Organism: Escherichia coli strain 05-3629 Replicon: chromosome
Accession: NZ_CP027373 Location: 53196..124510 Organism: Escherichia coli strain 05-3629 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P66_RS00290 () | 48676..50046 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| C6P66_RS00295 () | 50214..50885 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| C6P66_RS00300 () | 50885..52345 | + | 1461 | WP_000735406.1 | two-component system sensor histidine kinase PhoQ | - |
| C6P66_RS00305 () | 53196..53477 | - | 282 | WP_021292930.1 | hypothetical protein | - |
| C6P66_RS00315 () | 53733..54275 | - | 543 | WP_047087387.1 | terminase small subunit | - |
| C6P66_RS00330 () | 54549..54884 | - | 336 | WP_047087385.1 | head decoration protein | - |
| C6P66_RS00335 () | 54896..55951 | - | 1056 | WP_047083323.1 | major capsid protein | - |
| C6P66_RS00340 () | 55951..56157 | - | 207 | WP_000796963.1 | hypothetical protein | - |
| C6P66_RS00345 () | 56395..56805 | - | 411 | WP_000126680.1 | single-stranded DNA-binding protein | - |
| C6P66_RS00350 () | 56802..57053 | - | 252 | WP_106916349.1 | hypothetical protein | - |
| C6P66_RS00355 () | 57256..58665 | - | 1410 | Protein_64 | AAA family ATPase | - |
| C6P66_RS00360 () | 58662..58961 | - | 300 | WP_000770163.1 | DUF4222 domain-containing protein | - |
| C6P66_RS00365 () | 58967..59200 | - | 234 | WP_033817307.1 | hypothetical protein | - |
| C6P66_RS00370 () | 59193..59639 | - | 447 | WP_106916131.1 | hypothetical protein | - |
| C6P66_RS00375 () | 59629..59864 | - | 236 | Protein_68 | hypothetical protein | - |
| C6P66_RS00380 () | 59861..60322 | - | 462 | WP_086258130.1 | host cell division inhibitor Icd-like protein | - |
| C6P66_RS00385 () | 60315..61816 | - | 1502 | Protein_70 | host cell division inhibitor Icd-like protein | - |
| C6P66_RS00390 () | 62085..62273 | - | 189 | WP_000953271.1 | AlpA family transcriptional regulator | - |
| C6P66_RS00395 () | 62648..63877 | - | 1230 | WP_000085265.1 | Prophage integrase IntS ; Integrase | Integrase |
| C6P66_RS00400 () | 64126..65247 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| C6P66_RS00405 () | 65393..66622 | - | 1230 | WP_000359463.1 | peptidase T | - |
| C6P66_RS00415 () | 66872..68008 | + | 1137 | WP_000531601.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| C6P66_RS00420 () | 67992..68855 | + | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C6P66_RS00425 () | 69021..69350 | + | 330 | WP_022581964.1 | YkgJ family cysteine cluster protein | - |
| C6P66_RS00430 () | 69514..70188 | - | 675 | WP_001373129.1 | DUF4376 domain-containing protein | - |
| C6P66_RS00435 () | 70200..70412 | - | 213 | WP_000438830.1 | hypothetical protein | - |
| C6P66_RS00440 () | 70422..72080 | - | 1659 | WP_106916133.1 | ISNCY family transposase KIS | Transposase |
| C6P66_RS00445 () | 72224..72364 | - | 141 | WP_000078853.1 | Hok/Gef family protein | - |
| C6P66_RS00450 () | 72563..76249 | - | 3687 | WP_106916135.1 | DUF1983 domain-containing protein | - |
| C6P66_RS00455 () | 77158..77754 | - | 597 | WP_136795098.1 | tail assembly protein | - |
| C6P66_RS00460 () | 77700..78443 | - | 744 | WP_106916139.1 | C40 family peptidase | - |
| C6P66_RS00465 () | 78454..79152 | - | 699 | WP_106916141.1 | phage minor tail protein L | - |
| C6P66_RS00470 () | 79152..79481 | - | 330 | WP_000847280.1 | phage tail protein | - |
| C6P66_RS00475 () | 79478..82057 | - | 2580 | WP_106916143.1 | phage tail tape measure protein | - |
| C6P66_RS00480 () | 82038..82451 | - | 414 | WP_071532372.1 | phage tail assembly protein T | - |
| C6P66_RS00485 () | 82478..82909 | - | 432 | WP_001299690.1 | phage minor tail protein G | - |
| C6P66_RS00490 () | 82925..83674 | - | 750 | WP_000235126.1 | phage tail protein | - |
| C6P66_RS00495 () | 83682..84077 | - | 396 | WP_000683074.1 | phage minor tail U family protein | - |
| C6P66_RS00500 () | 84074..84649 | - | 576 | WP_001571311.1 | phage tail protein | - |
| C6P66_RS00505 () | 84665..85018 | - | 354 | WP_001204531.1 | tail attachment protein | - |
| C6P66_RS00510 () | 85011..85394 | - | 384 | WP_001373367.1 | hypothetical protein | - |
| C6P66_RS00515 () | 85446..86474 | - | 1029 | WP_044803575.1 | major capsid protein | - |
| C6P66_RS00520 () | 86532..86879 | - | 348 | WP_000256803.1 | head decoration protein | - |
| C6P66_RS00525 () | 86916..88421 | - | 1506 | WP_106916145.1 | S49 family peptidase | - |
| C6P66_RS00530 () | 88411..90003 | - | 1593 | WP_001441764.1 | phage portal protein | - |
| C6P66_RS00535 () | 90000..90206 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| C6P66_RS00540 () | 90190..92118 | - | 1929 | WP_001348272.1 | phage terminase large subunit family protein | - |
| C6P66_RS00545 () | 92090..92638 | - | 549 | WP_001102148.1 | terminase small subunit | - |
| C6P66_RS00560 () | 93078..93302 | - | 225 | WP_032308174.1 | hypothetical protein | - |
| C6P66_RS26830 () | 93388..93573 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6P66_RS00570 () | 93795..93908 | - | 114 | WP_000675931.1 | hypothetical protein | - |
| C6P66_RS00575 () | 94129..94662 | - | 534 | WP_062878145.1 | lysozyme | - |
| C6P66_RS00580 () | 94797..95084 | - | 288 | WP_106916150.1 | hypothetical protein | - |
| C6P66_RS00585 () | 95173..95964 | - | 792 | WP_001041949.1 | DUF1327 domain-containing protein | - |
| C6P66_RS00590 () | 95968..96183 | - | 216 | WP_000284490.1 | class II holin family protein | - |
| C6P66_RS00595 () | 96261..96506 | - | 246 | WP_001290214.1 | DUF826 domain-containing protein | - |
| C6P66_RS00600 () | 96547..96726 | - | 180 | WP_000143458.1 | DUF1378 family protein | - |
| C6P66_RS00605 () | 96876..98813 | - | 1938 | WP_106916152.1 | SASA family carbohydrate esterase | - |
| C6P66_RS00610 () | 99057..99380 | + | 324 | Protein_112 | anti-adapter protein IraM | - |
| C6P66_RS00615 () | 99678..99947 | - | 270 | WP_000738072.1 | Shiga toxin subunit B | VF |
| C6P66_RS00620 () | 99959..100918 | - | 960 | WP_000649753.1 | Shiga toxin subunit A | VF |
| C6P66_RS00640 () | 101301..102359 | - | 1059 | WP_106916154.1 | site-specific DNA-methyltransferase | - |
| C6P66_RS26840 () | 102510..102707 | - | 198 | WP_000917735.1 | hypothetical protein | - |
| C6P66_RS00655 () | 102950..103480 | - | 531 | WP_001367730.1 | DUF1133 family protein | - |
| C6P66_RS00660 () | 103489..103848 | - | 360 | WP_106916156.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6P66_RS00665 () | 103861..104910 | - | 1050 | WP_106916158.1 | DUF968 domain-containing protein | - |
| C6P66_RS00670 () | 104912..105184 | - | 273 | WP_106916160.1 | hypothetical protein | - |
| C6P66_RS00675 () | 105351..105506 | - | 156 | WP_000813246.1 | type I toxin-antitoxin system Hok family toxin | - |
| C6P66_RS00680 () | 105797..106312 | - | 516 | WP_001289995.1 | hypothetical protein | - |
| C6P66_RS27080 () | 106309..106485 | - | 177 | WP_000753060.1 | hypothetical protein | - |
| C6P66_RS00685 () | 106478..106660 | - | 183 | WP_032284905.1 | hypothetical protein | - |
| C6P66_RS00690 () | 106808..107113 | - | 306 | WP_072095369.1 | DUF4406 domain-containing protein | - |
| C6P66_RS00695 () | 107110..107391 | - | 282 | WP_072094476.1 | DNA-binding protein | - |
| C6P66_RS00700 () | 107424..108140 | - | 717 | WP_050877165.1 | DUF1627 domain-containing protein | - |
| C6P66_RS00705 () | 108174..108716 | - | 543 | WP_072130322.1 | replication protein | - |
| C6P66_RS26845 () | 108628..109659 | - | 1032 | WP_028985607.1 | phage replisome organiser | - |
| C6P66_RS00715 () | 109728..110153 | - | 426 | WP_000693925.1 | Rha family transcriptional regulator | - |
| C6P66_RS00720 () | 110150..110452 | - | 303 | WP_032279888.1 | transcriptional regulator | - |
| C6P66_RS00725 () | 110549..110920 | + | 372 | WP_001169685.1 | hypothetical protein | - |
| C6P66_RS00730 () | 110941..111132 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C6P66_RS00735 () | 111134..111412 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6P66_RS00740 () | 111703..111855 | + | 153 | WP_000367379.1 | DUF1391 family protein | - |
| C6P66_RS00745 () | 111969..112484 | - | 516 | WP_032284904.1 | hypothetical protein | - |
| C6P66_RS00760 () | 113013..113201 | + | 189 | WP_000450222.1 | cell division inhibitor | - |
| C6P66_RS00765 () | 113198..113386 | + | 189 | WP_000092784.1 | DUF1482 family protein | - |
| C6P66_RS00770 () | 113479..115923 | + | 2445 | WP_032284903.1 | exonuclease | - |
| C6P66_RS00775 () | 115985..116254 | + | 270 | WP_000003742.1 | excisionase | - |
| C6P66_RS00780 () | 116223..117341 | + | 1119 | WP_000074972.1 | hypothetical protein ; Integrase | Integrase |
| C6P66_RS00785 () | 117508..118302 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| C6P66_RS00790 () | 118299..119345 | + | 1047 | WP_000759318.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| C6P66_RS00795 () | 119403..119864 | + | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| C6P66_RS00800 () | 119861..120649 | + | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| C6P66_RS00805 () | 120788..121609 | - | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| C6P66_RS00810 () | 121625..122536 | - | 912 | WP_001402175.1 | N-acetylglucosamine kinase | - |
| C6P66_RS00815 () | 122565..123809 | - | 1245 | WP_001251392.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| C6P66_RS00820 () | 123809..124510 | - | 702 | WP_001033694.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| C6P66_RS00825 () | 124503..125702 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| C6P66_RS00830 () | 125964..127037 | + | 1074 | WP_000810250.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|