MGE detailed information
MGE type: Prophage MGE length: 66822 bp
Accession: NZ_CP027371 Location: 1203594..1270415 Organism: Escherichia coli strain 2015C-3905 Replicon: chromosome
Accession: NZ_CP027371 Location: 1203594..1270415 Organism: Escherichia coli strain 2015C-3905 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P67_RS06280 () | 1198860..1199210 | + | 351 | WP_000950104.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C6P67_RS06285 () | 1199241..1200833 | + | 1593 | WP_000080210.1 | IS66 family transposase | - |
| C6P67_RS06290 () | 1200820..1201074 | - | 255 | WP_106879104.1 | hypothetical protein | - |
| C6P67_RS06295 () | 1201071..1201532 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| C6P67_RS06300 () | 1201590..1202636 | - | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| C6P67_RS06305 () | 1202633..1203427 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| C6P67_RS06310 () | 1203594..1204712 | - | 1119 | WP_000074972.1 | hypothetical protein ; Integrase | Integrase |
| C6P67_RS06315 () | 1204681..1204950 | - | 270 | WP_000003742.1 | excisionase | - |
| C6P67_RS06320 () | 1205012..1207456 | - | 2445 | WP_032284903.1 | exonuclease | - |
| C6P67_RS06325 () | 1207549..1207737 | - | 189 | WP_000092784.1 | DUF1482 family protein | - |
| C6P67_RS06330 () | 1207734..1207922 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C6P67_RS06345 () | 1208451..1208966 | + | 516 | WP_000559920.1 | hypothetical protein | - |
| C6P67_RS06350 () | 1209080..1209232 | - | 153 | WP_000367379.1 | DUF1391 family protein | - |
| C6P67_RS06355 () | 1209523..1209801 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6P67_RS06360 () | 1209803..1209994 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C6P67_RS06365 () | 1210015..1210386 | - | 372 | WP_001169685.1 | hypothetical protein | - |
| C6P67_RS06370 () | 1210483..1210785 | + | 303 | WP_032279888.1 | transcriptional regulator | - |
| C6P67_RS06375 () | 1210782..1211207 | + | 426 | WP_000693925.1 | Rha family transcriptional regulator | - |
| C6P67_RS26495 () | 1211276..1212307 | + | 1032 | WP_044527394.1 | phage replisome organiser | - |
| C6P67_RS06385 () | 1212219..1212761 | + | 543 | WP_072130322.1 | replication protein | - |
| C6P67_RS06390 () | 1212795..1213511 | + | 717 | WP_106879105.1 | DUF1627 domain-containing protein | - |
| C6P67_RS06395 () | 1213544..1213825 | + | 282 | WP_072094476.1 | DNA-binding protein | - |
| C6P67_RS06400 () | 1213822..1214127 | + | 306 | WP_072094475.1 | DUF4406 domain-containing protein | - |
| C6P67_RS06405 () | 1214275..1214457 | + | 183 | WP_001224672.1 | hypothetical protein | - |
| C6P67_RS26670 () | 1214450..1214626 | + | 177 | WP_000753060.1 | hypothetical protein | - |
| C6P67_RS06410 () | 1214623..1215138 | + | 516 | WP_001289995.1 | hypothetical protein | - |
| C6P67_RS06415 () | 1215429..1215584 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6P67_RS06420 () | 1215829..1216188 | + | 360 | WP_001219083.1 | helix-turn-helix domain-containing protein | - |
| C6P67_RS06425 () | 1216191..1216667 | + | 477 | WP_000284536.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C6P67_RS06435 () | 1217100..1217378 | + | 279 | WP_024200925.1 | hypothetical protein | - |
| C6P67_RS06440 () | 1217380..1218429 | + | 1050 | WP_050868115.1 | DUF968 domain-containing protein | - |
| C6P67_RS06445 () | 1218447..1218839 | + | 393 | WP_001204796.1 | antitermination protein Q | - |
| C6P67_RS06450 () | 1218906..1219523 | + | 618 | WP_001005105.1 | hypothetical protein | - |
| C6P67_RS06455 () | 1219759..1219956 | + | 198 | WP_000917741.1 | hypothetical protein | - |
| C6P67_RS06460 () | 1220107..1221165 | + | 1059 | WP_106879106.1 | site-specific DNA-methyltransferase | - |
| C6P67_RS06480 () | 1221549..1222508 | + | 960 | WP_050864278.1 | Shiga toxin subunit A | VF |
| C6P67_RS06485 () | 1222520..1222789 | + | 270 | WP_000738072.1 | Shiga toxin subunit B | VF |
| C6P67_RS06490 () | 1223291..1225228 | + | 1938 | WP_064549419.1 | SASA family carbohydrate esterase | - |
| C6P67_RS06495 () | 1225366..1225545 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| C6P67_RS06500 () | 1225586..1225831 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| C6P67_RS06505 () | 1225909..1226124 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| C6P67_RS06510 () | 1226128..1226919 | + | 792 | WP_039264424.1 | DUF1327 domain-containing protein | - |
| C6P67_RS06520 () | 1227431..1227964 | + | 534 | WP_001092874.1 | lysozyme | - |
| C6P67_RS06525 () | 1228239..1228811 | + | 573 | WP_001056888.1 | hypothetical protein | - |
| C6P67_RS26500 () | 1228811..1228960 | + | 150 | WP_000443009.1 | hypothetical protein | - |
| C6P67_RS06530 () | 1228963..1229400 | + | 438 | WP_032209690.1 | lysis protein | - |
| C6P67_RS06535 () | 1229603..1230145 | + | 543 | WP_001109017.1 | Rha family transcriptional regulator | - |
| C6P67_RS06545 () | 1230856..1231362 | + | 507 | WP_001405844.1 | terminase small subunit | - |
| C6P67_RS06550 () | 1231334..1233262 | + | 1929 | WP_001499025.1 | phage terminase large subunit family protein | - |
| C6P67_RS06555 () | 1233246..1233452 | + | 207 | WP_000259002.1 | head-tail joining protein | - |
| C6P67_RS06560 () | 1233449..1235041 | + | 1593 | WP_001398667.1 | phage portal protein | - |
| C6P67_RS06565 () | 1235031..1236536 | + | 1506 | WP_001253971.1 | S49 family peptidase | - |
| C6P67_RS06570 () | 1236572..1236919 | + | 348 | WP_000256813.1 | head decoration protein | - |
| C6P67_RS06575 () | 1236977..1238005 | + | 1029 | WP_000522633.1 | major capsid protein | - |
| C6P67_RS06580 () | 1238058..1238441 | + | 384 | WP_000201497.1 | hypothetical protein | - |
| C6P67_RS06585 () | 1238434..1238787 | + | 354 | WP_001204259.1 | tail attachment protein | - |
| C6P67_RS06590 () | 1238803..1239378 | + | 576 | WP_000974993.1 | phage tail protein | - |
| C6P67_RS06595 () | 1239375..1239770 | + | 396 | WP_000683075.1 | phage minor tail U family protein | - |
| C6P67_RS06600 () | 1239778..1240527 | + | 750 | WP_106879107.1 | phage tail protein | - |
| C6P67_RS06605 () | 1240547..1240978 | + | 432 | WP_052903904.1 | phage minor tail protein G | - |
| C6P67_RS06610 () | 1241005..1241409 | + | 405 | WP_072126353.1 | phage tail assembly protein T | - |
| C6P67_RS06615 () | 1241390..1243969 | + | 2580 | WP_106879108.1 | phage tail tape measure protein | - |
| C6P67_RS06620 () | 1243966..1244295 | + | 330 | WP_000847279.1 | phage tail protein | - |
| C6P67_RS06625 () | 1244295..1244993 | + | 699 | WP_106879109.1 | phage minor tail protein L | - |
| C6P67_RS06630 () | 1245004..1245747 | + | 744 | WP_044808579.1 | C40 family peptidase | - |
| C6P67_RS06635 () | 1245693..1246325 | + | 633 | WP_136755463.1 | tail assembly protein | - |
| C6P67_RS06640 () | 1247239..1250924 | + | 3686 | Protein_1195 | DUF1983 domain-containing protein | - |
| C6P67_RS06645 () | 1251123..1251263 | + | 141 | WP_000078853.1 | Hok/Gef family protein | - |
| C6P67_RS06650 () | 1251408..1253120 | + | 1713 | Protein_1197 | ISNCY family transposase KIS | Transposase |
| C6P67_RS06655 () | 1253130..1253342 | + | 213 | WP_000438829.1 | hypothetical protein | - |
| C6P67_RS06660 () | 1253354..1254028 | + | 675 | WP_001373129.1 | DUF4376 domain-containing protein | - |
| C6P67_RS06665 () | 1254191..1254520 | - | 330 | WP_022581964.1 | YkgJ family cysteine cluster protein | - |
| C6P67_RS06670 () | 1254684..1255547 | - | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C6P67_RS06675 () | 1255531..1256667 | - | 1137 | WP_000531594.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| C6P67_RS06685 () | 1256917..1258146 | + | 1230 | WP_000359461.1 | peptidase T | - |
| C6P67_RS06690 () | 1258292..1259413 | - | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| C6P67_RS06695 () | 1259662..1260891 | + | 1230 | WP_032326825.1 | Prophage integrase IntS ; Integrase | Integrase |
| C6P67_RS06700 () | 1261266..1261454 | + | 189 | WP_000953271.1 | AlpA family transcriptional regulator | - |
| C6P67_RS06705 () | 1261698..1261901 | - | 204 | WP_000182306.1 | hypothetical protein | - |
| C6P67_RS06710 () | 1261959..1262138 | - | 180 | WP_000103621.1 | hypothetical protein | - |
| C6P67_RS06720 () | 1262644..1262823 | - | 180 | WP_000190551.1 | hypothetical protein | - |
| C6P67_RS06725 () | 1263016..1263213 | + | 198 | WP_106879110.1 | host cell division inhibitor Icd-like protein | - |
| C6P67_RS06730 () | 1263206..1263418 | + | 213 | WP_047091603.1 | hypothetical protein | - |
| C6P67_RS06735 () | 1263408..1263872 | + | 465 | WP_106879111.1 | hypothetical protein | - |
| C6P67_RS06740 () | 1263865..1264098 | + | 234 | WP_047091601.1 | hypothetical protein | - |
| C6P67_RS06745 () | 1264104..1264403 | + | 300 | WP_000770163.1 | DUF4222 domain-containing protein | - |
| C6P67_RS06750 () | 1264400..1265806 | + | 1407 | WP_106879112.1 | helicase RepA family protein | - |
| C6P67_RS06760 () | 1266008..1266259 | + | 252 | WP_032307310.1 | hypothetical protein | - |
| C6P67_RS06765 () | 1266256..1266678 | + | 423 | WP_032307311.1 | single-stranded DNA-binding protein | - |
| C6P67_RS06775 () | 1267096..1267302 | + | 207 | WP_032308115.1 | hypothetical protein | - |
| C6P67_RS06780 () | 1267302..1268357 | + | 1056 | WP_032308116.1 | major capsid protein | - |
| C6P67_RS06785 () | 1268369..1268704 | + | 336 | WP_000380882.1 | head decoration protein | - |
| C6P67_RS06790 () | 1268717..1269130 | + | 414 | WP_032308117.1 | hypothetical protein | - |
| C6P67_RS06795 () | 1269336..1269878 | + | 543 | WP_000835281.1 | terminase small subunit | - |
| C6P67_RS06805 () | 1270134..1270415 | + | 282 | WP_000133424.1 | hypothetical protein | - |
| C6P67_RS06810 () | 1271017..1272477 | - | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| C6P67_RS06815 () | 1272477..1273148 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| C6P67_RS06820 () | 1273316..1274686 | - | 1371 | WP_000423750.1 | adenylosuccinate lyase | - |
| C6P67_RS06825 () | 1274690..1275331 | - | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|