MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 176149 bp
Accession: NZ_CP027370 Location: 1..176149 Organism: Escherichia coli strain 2014C-3307 Replicon: plasmid unnamed2
Accession: NZ_CP027370 Location: 1..176149 Organism: Escherichia coli strain 2014C-3307 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P71_RS26485 () | 120..968 | - | 849 | WP_106889143.1 | DUF4942 domain-containing protein | - |
| C6P71_RS27985 () | 1315..1512 | + | 198 | WP_062892290.1 | hypothetical protein | - |
| C6P71_RS26500 () | 1546..1797 | + | 252 | WP_032275068.1 | helix-turn-helix domain-containing protein | - |
| C6P71_RS26505 () | 1828..2034 | - | 207 | WP_032275069.1 | hypothetical protein | VF |
| C6P71_RS26510 () | 2096..2985 | - | 890 | Protein_4 | Recombination-promoting nuclease RpnA | VF |
| C6P71_RS26515 () | 2982..3371 | - | 390 | WP_001317525.1 | hypothetical protein | - |
| C6P71_RS26520 () | 3562..3828 | - | 267 | WP_001247861.1 | hypothetical protein | - |
| C6P71_RS26525 () | 3921..4355 | - | 435 | WP_000218850.1 | hypothetical protein | - |
| C6P71_RS26535 () | 5084..5584 | - | 501 | WP_000117618.1 | antirestriction protein ArdA | - |
| C6P71_RS26545 () | 6048..6644 | - | 597 | WP_000978007.1 | hypothetical protein | - |
| C6P71_RS26550 () | 6641..7360 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6P71_RS26555 () | 7357..7791 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| C6P71_RS26560 () | 7846..9804 | - | 1959 | WP_052920252.1 | ParB/RepB/Spo0J family partition protein | - |
| C6P71_RS26565 () | 9865..10098 | - | 234 | WP_052920250.1 | DUF905 domain-containing protein | - |
| C6P71_RS26570 () | 10161..10688 | - | 528 | WP_052901324.1 | single-stranded DNA-binding protein | - |
| C6P71_RS27790 () | 11125..11478 | - | 354 | WP_159027737.1 | hypothetical protein | - |
| C6P71_RS26585 () | 11441..11632 | - | 192 | WP_001027048.1 | hypothetical protein | - |
| C6P71_RS26590 () | 11632..12051 | - | 420 | WP_052920245.1 | DUF1380 family protein | - |
| C6P71_RS26595 () | 12098..12400 | - | 303 | WP_136755353.1 | antirestriction protein | - |
| C6P71_RS27805 () | 12940..13716 | - | 777 | WP_052920241.1 | hypothetical protein | - |
| C6P71_RS26610 () | 13761..14195 | - | 435 | WP_052920239.1 | DUF1380 family protein | - |
| C6P71_RS26615 () | 14209..14430 | - | 222 | WP_001104894.1 | hypothetical protein | - |
| C6P71_RS26620 () | 14431..15114 | - | 684 | WP_000086113.1 | DNA methylase | - |
| C6P71_RS26625 () | 15191..15503 | - | 313 | Protein_23 | hypothetical protein | - |
| C6P71_RS26630 () | 15500..16402 | - | 903 | WP_077815841.1 | DUF1281 domain-containing protein | - |
| C6P71_RS26640 () | 16821..17069 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| C6P71_RS26645 () | 17066..17503 | + | 438 | WP_000109074.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6P71_RS26655 () | 17503..18773 | + | 1271 | Protein_27 | Y-family DNA polymerase | - |
| C6P71_RS26660 () | 18945..19571 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| C6P71_RS27990 () | 19568..19870 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| C6P71_RS27995 () | 20251..20502 | + | 252 | WP_031322317.1 | hypothetical protein | - |
| C6P71_RS26680 () | 20502..21092 | + | 591 | WP_000194574.1 | hypothetical protein | - |
| C6P71_RS26685 () | 21112..21459 | - | 348 | WP_000142449.1 | hypothetical protein | - |
| C6P71_RS26690 () | 21578..21925 | + | 348 | WP_000762580.1 | hypothetical protein | - |
| C6P71_RS26695 () | 21943..23823 | - | 1881 | WP_047086371.1 | colicin | - |
| C6P71_RS26700 () | 24102..24767 | - | 666 | WP_000448923.1 | hypothetical protein | - |
| C6P71_RS26705 () | 24790..24999 | - | 210 | Protein_36 | IS21 family transposase IS21 | Transposase |
| C6P71_RS26715 () | 25496..27469 | + | 1974 | WP_024199761.1 | Hemin receptor | VF |
| C6P71_RS26720 () | 27488..28279 | + | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| C6P71_RS26725 () | 28623..29042 | + | 420 | WP_000422695.1 | IS66 family transposase ISEc23 | Transposase |
| C6P71_RS26730 () | 29039..29389 | + | 351 | WP_047086369.1 | IS66 family transposase IS682 | Transposase |
| C6P71_RS26735 () | 29420..31012 | + | 1593 | WP_047086367.1 | IS66 family transposase ISEc47 | Transposase |
| C6P71_RS26740 () | 31042..31215 | + | 174 | Protein_42 | DUF4113 domain-containing protein | - |
| C6P71_RS26745 () | 31217..31633 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| C6P71_RS26750 () | 31626..32606 | - | 981 | WP_096955086.1 | plasmid segregation protein ParM | - |
| C6P71_RS26755 () | 33021..33329 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| C6P71_RS26760 () | 33416..34060 | - | 645 | WP_001144036.1 | ParA family protein | - |
| C6P71_RS26765 () | 34241..35047 | - | 807 | WP_000016966.1 | site-specific integrase | - |
| C6P71_RS26770 () | 35048..35353 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6P71_RS26775 () | 35355..35573 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6P71_RS26780 () | 36169..36429 | + | 261 | WP_047086508.1 | hypothetical protein | - |
| C6P71_RS26785 () | 36426..37016 | + | 591 | WP_000194569.1 | hypothetical protein | - |
| C6P71_RS26790 () | 37034..37381 | - | 348 | WP_000142427.1 | hypothetical protein | - |
| C6P71_RS26800 () | 37864..38235 | - | 372 | WP_001373114.1 | colicin | - |
| C6P71_RS26805 () | 38295..39026 | - | 732 | WP_000850414.1 | complement resistance protein TraT | - |
| C6P71_RS26815 () | 39298..39408 | - | 111 | Protein_55 | IS481 family transposase | - |
| C6P71_RS28000 () | 39412..39629 | - | 218 | Protein_56 | hypothetical protein | - |
| C6P71_RS26830 () | 40192..41169 | + | 978 | WP_011310114.1 | RepB family plasmid replication initiator protein | - |
| C6P71_RS26835 () | 41454..42167 | - | 714 | Protein_58 | tyrosine-type recombinase/integrase | - |
| C6P71_RS26845 () | 42231..43457 | - | 1227 | Protein_59 | ISL3 family transposase | - |
| C6P71_RS26850 () | 43611..43850 | - | 240 | WP_072130327.1 | serine/threonine protein kinase | - |
| C6P71_RS26860 () | 43980..44474 | - | 495 | WP_047086509.1 | Transcriptional repressor MprA | VF |
| C6P71_RS26865 () | 44594..46033 | - | 1440 | WP_047086510.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6P71_RS26870 () | 46037..48157 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6P71_RS26875 () | 48207..51203 | - | 2997 | WP_047086513.1 | Hemolysin, chromosomal | VF |
| C6P71_RS26880 () | 51205..51720 | - | 516 | WP_000839942.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C6P71_RS26885 () | 52146..52949 | - | 804 | WP_000899427.1 | Outer membrane protein A | VF |
| C6P71_RS26890 () | 52974..57308 | - | 4335 | WP_047086514.1 | Autotransporter adhesin SadA | VF |
| C6P71_RS26895 () | 57321..57611 | - | 291 | WP_000070403.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6P71_RS28005 () | 58328..58481 | + | 154 | Protein_69 | IS91 family transposase | - |
| C6P71_RS26915 () | 59904..61089 | + | 1186 | Protein_70 | IS110 family transposase | - |
| C6P71_RS26920 () | 61126..61306 | + | 181 | Protein_71 | IS1 family transposase | - |
| C6P71_RS26935 () | 62597..62893 | - | 297 | WP_106889145.1 | flagellar biosynthesis protein FlgM | - |
| C6P71_RS26940 () | 62924..63114 | - | 191 | Protein_74 | hypothetical protein | - |
| C6P71_RS26945 () | 63124..63489 | - | 366 | WP_106889146.1 | hypothetical protein | - |
| C6P71_RS26955 () | 63996..68074 | - | 4079 | Protein_76 | Serine protease SepA autotransporter | VF |
| C6P71_RS26960 () | 68740..69680 | - | 941 | Protein_77 | IS3 family transposase | - |
| C6P71_RS26965 () | 70066..71559 | + | 1494 | WP_106889147.1 | Adhesin YadA | VF |
| C6P71_RS26970 () | 71811..72073 | + | 263 | Protein_79 | IS3 family transposase | - |
| C6P71_RS26975 () | 72170..73373 | + | 1204 | Protein_80 | IS3 family transposase | - |
| C6P71_RS26980 () | 73650..73829 | + | 180 | Protein_81 | integrase core domain-containing protein | - |
| C6P71_RS26990 () | 74137..76224 | + | 2088 | WP_001367773.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C6P71_RS26995 () | 76485..76907 | - | 423 | WP_047087018.1 | Exc2 family lipoprotein | - |
| C6P71_RS27000 () | 77092..78606 | - | 1515 | WP_106889148.1 | IS66 family transposase ISEc8 | Transposase |
| C6P71_RS27005 () | 78656..79003 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C6P71_RS27010 () | 79000..79380 | - | 381 | WP_001171547.1 | IS66 family transposase ISEc8 | Transposase |
| C6P71_RS27020 () | 79874..79990 | - | 117 | WP_072130407.1 | Hok/Gef family protein | - |
| C6P71_RS27025 () | 80346..80588 | + | 243 | WP_001398505.1 | hypothetical protein | - |
| C6P71_RS27815 () | 82410..86308 | + | 3899 | Protein_90 | Serine protease EspP | VF |
| C6P71_RS27060 () | 87188..87379 | + | 192 | WP_052920681.1 | hypothetical protein | - |
| C6P71_RS27065 () | 87410..87721 | + | 312 | WP_096557575.1 | flagellar biosynthesis protein FlgM | - |
| C6P71_RS27070 () | 87973..88302 | + | 330 | WP_001442266.1 | IS3 family transposase ISKpn8 | Transposase |
| C6P71_RS27080 () | 88656..89354 | - | 699 | WP_000431491.1 | lactate utilization protein C | - |
| C6P71_RS27085 () | 89359..90774 | - | 1416 | WP_000054157.1 | iron-sulfur cluster-binding protein | - |
| C6P71_RS27090 () | 90785..91504 | - | 720 | WP_001102132.1 | (Fe-S)-binding protein | - |
| C6P71_RS27095 () | 91554..93110 | - | 1557 | WP_000554413.1 | L-lactate permease | - |
| C6P71_RS27100 () | 93643..94849 | + | 1207 | Protein_98 | IS3 family transposase | - |
| C6P71_RS27105 () | 95127..95527 | + | 401 | Protein_99 | hypothetical protein | - |
| C6P71_RS27110 () | 95627..95734 | - | 108 | Protein_100 | helix-turn-helix domain-containing protein | - |
| C6P71_RS27115 () | 95826..96500 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6P71_RS27120 () | 96497..96844 | + | 348 | WP_000631723.1 | IS66 family transposase ISSfl3 | Transposase |
| C6P71_RS27125 () | 96864..98420 | + | 1557 | WP_001066416.1 | IS66 family transposase ISSfl3 | Transposase |
| C6P71_RS27130 () | 98453..99694 | + | 1242 | Protein_104 | Tn3 family transposase ISEc63 | Transposase |
| C6P71_RS27820 () | 99962..100039 | - | 78 | Protein_105 | colicin V | - |
| C6P71_RS27825 () | 100017..100253 | - | 237 | WP_032257624.1 | colicin V immunity protein | - |
| C6P71_RS27145 () | 100920..101177 | - | 258 | WP_077788362.1 | hypothetical protein | - |
| C6P71_RS27150 () | 101263..101757 | - | 495 | WP_000388880.1 | DUF2569 domain-containing protein | - |
| C6P71_RS27155 () | 101843..102100 | - | 258 | WP_000812110.1 | hypothetical protein | - |
| C6P71_RS27160 () | 102097..102720 | - | 624 | WP_064767287.1 | hypothetical protein | - |
| C6P71_RS27165 () | 103136..103318 | - | 183 | WP_000205441.1 | hypothetical protein | - |
| C6P71_RS27170 () | 103328..103630 | - | 303 | WP_001370014.1 | hypothetical protein | - |
| C6P71_RS27180 () | 103617..113104 | - | 9488 | Protein_113 | tRNA nuclease CdiA | VF |
| C6P71_RS27185 () | 113117..114883 | - | 1767 | WP_047086877.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| C6P71_RS27195 () | 115496..115735 | - | 240 | WP_071988618.1 | MarR family transcriptional regulator | - |
| C6P71_RS28010 () | 115748..116008 | - | 261 | WP_072094435.1 | hypothetical protein | - |
| C6P71_RS27215 () | 116702..117574 | - | 873 | WP_000729440.1 | incFII family plasmid replication initiator RepA | - |
| C6P71_RS27230 () | 118277..118918 | + | 642 | WP_000335846.1 | transcription termination factor NusG | - |
| C6P71_RS27235 () | 119059..119724 | + | 666 | WP_052920511.1 | traC | - |
| C6P71_RS27245 () | 119991..120611 | + | 621 | WP_000176497.1 | DUF1449 family protein | - |
| C6P71_RS27250 () | 120638..122332 | + | 1695 | WP_000482663.1 | flotillin family protein | - |
| C6P71_RS27255 () | 122413..122655 | + | 243 | WP_047086880.1 | PilI type IV pilus biogenesis protein | - |
| C6P71_RS27260 () | 122772..123107 | + | 336 | WP_024174020.1 | hypothetical protein | - |
| C6P71_RS27265 () | 123263..124330 | + | 1068 | WP_021511700.1 | hypothetical protein | VF |
| C6P71_RS27270 () | 124335..124772 | + | 438 | WP_000539685.1 | type IV pilus biogenesis protein PilM | - |
| C6P71_RS27275 () | 124803..126422 | + | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| C6P71_RS27280 () | 126443..127738 | + | 1296 | WP_047086884.1 | type 4b pilus protein PilO2 | - |
| C6P71_RS27285 () | 127728..128178 | + | 451 | Protein_128 | type IV pilus biogenesis protein PilP | - |
| C6P71_RS27290 () | 128263..129771 | + | 1509 | WP_000886638.1 | Type II secretion system protein E | VF |
| C6P71_RS27295 () | 129773..130873 | + | 1101 | WP_000670136.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| C6P71_RS27300 () | 130947..131483 | + | 537 | WP_001011156.1 | cleavage protein | - |
| C6P71_RS27305 () | 131537..132010 | + | 474 | WP_000870986.1 | hypothetical protein | VF |
| C6P71_RS27310 () | 132029..132664 | + | 636 | WP_021580044.1 | prepilin peptidase | - |
| C6P71_RS27315 () | 132669..134033 | + | 1365 | WP_021531785.1 | hypothetical protein | VF |
| C6P71_RS27330 () | 134491..134781 | + | 291 | WP_000681898.1 | hypothetical protein | - |
| C6P71_RS27335 () | 134873..135193 | - | 321 | WP_000695052.1 | hypothetical protein | - |
| C6P71_RS27340 () | 135453..136274 | + | 822 | WP_000804089.1 | hypothetical protein | - |
| C6P71_RS27345 () | 136364..137566 | + | 1203 | WP_000980149.1 | conjugal transfer protein TraF | - |
| C6P71_RS27350 () | 137924..138376 | + | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| C6P71_RS27355 () | 138373..139209 | + | 837 | WP_000848138.1 | hypothetical protein | VF |
| C6P71_RS27360 () | 139193..140341 | + | 1149 | WP_000625249.1 | putative protein YggR | VF |
| C6P71_RS27365 () | 140338..140628 | + | 291 | WP_000817799.1 | hypothetical protein | - |
| C6P71_RS27370 () | 140692..144708 | + | 4017 | WP_106889152.1 | DNA primase | - |
| C6P71_RS27375 () | 144725..145075 | + | 351 | WP_033806792.1 | hypothetical protein | - |
| C6P71_RS27380 () | 145087..145782 | + | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| C6P71_RS27385 () | 145793..146766 | + | 974 | Protein_146 | hypothetical protein | VF |
| C6P71_RS27830 () | 146770..148100 | + | 1331 | Protein_147 | conjugal transfer protein TraO | - |
| C6P71_RS27400 () | 148097..148809 | + | 713 | Protein_148 | conjugal transfer protein TraP | - |
| C6P71_RS27405 () | 148809..149336 | + | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| C6P71_RS27410 () | 149383..149781 | + | 399 | WP_000086066.1 | hypothetical protein | - |
| C6P71_RS27415 () | 149838..150089 | + | 252 | WP_001277575.1 | hypothetical protein | - |
| C6P71_RS27420 () | 150004..150822 | + | 819 | WP_073978186.1 | conjugal transfer protein TraT | - |
| C6P71_RS27425 () | 150879..151238 | + | 360 | WP_021552469.1 | hypothetical protein | - |
| C6P71_RS27430 () | 151238..151618 | + | 381 | WP_021552468.1 | hypothetical protein | - |
| C6P71_RS27435 () | 151794..154838 | + | 3045 | WP_106889154.1 | conjugal transfer protein | - |
| C6P71_RS27440 () | 154838..155455 | + | 618 | WP_000286857.1 | hypothetical protein | - |
| C6P71_RS27445 () | 155416..156621 | + | 1206 | WP_157912476.1 | conjugal transfer protein TraW | - |
| C6P71_RS27450 () | 156618..157187 | + | 570 | WP_001204060.1 | conjugal transfer protein TraX | - |
| C6P71_RS27455 () | 157260..159425 | + | 2166 | WP_106889155.1 | DotA/TraY family protein | - |
| C6P71_RS27460 () | 159513..160163 | + | 651 | WP_047086907.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C6P71_RS27465 () | 160319..160480 | + | 162 | WP_001138649.1 | hypothetical protein | - |
| C6P71_RS27470 () | 160477..160629 | - | 153 | WP_033800779.1 | Hok/Gef family protein | - |
| C6P71_RS27475 () | 160962..161204 | + | 243 | WP_001398505.1 | hypothetical protein | - |
| C6P71_RS27480 () | 161297..162832 | - | 1536 | WP_175400450.1 | phosphoethanolamine transferase | - |
| C6P71_RS27485 () | 163032..163487 | - | 456 | WP_047086903.1 | DUF2569 family protein | - |
| C6P71_RS27490 () | 163575..164198 | - | 624 | WP_001158020.1 | hypothetical protein | - |
| C6P71_RS27495 () | 164347..164832 | + | 486 | WP_001563232.1 | thermonuclease family protein | - |
| C6P71_RS27500 () | 165133..165341 | - | 209 | Protein_168 | hypothetical protein | - |
| C6P71_RS27510 () | 165475..165840 | + | 366 | WP_001370958.1 | hypothetical protein | - |
| C6P71_RS27515 () | 165850..166041 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| C6P71_RS27520 () | 166072..166383 | + | 312 | WP_047083889.1 | hypothetical protein | - |
| C6P71_RS27535 () | 167166..168428 | + | 1263 | WP_032275059.1 | IncI1-type conjugal transfer protein TrbA | - |
| C6P71_RS27540 () | 168425..169549 | + | 1125 | WP_032275061.1 | DsbC family protein | - |
| C6P71_RS27545 () | 169530..171833 | + | 2304 | WP_100029829.1 | TraM recognition domain-containing protein | - |
| C6P71_RS27555 () | 172312..172542 | + | 231 | WP_106889156.1 | hypothetical protein | - |
| C6P71_RS27560 () | 172640..173071 | - | 432 | WP_073614123.1 | tolA family protein | - |
| C6P71_RS27565 () | 173139..175850 | - | 2712 | WP_106889157.1 | Protein TraI | Relaxase |
| C6P71_RS27835 () | 175862..176149 | - | 288 | WP_052975787.1 | nikA protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|