MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 20446 bp
Accession: NZ_CP027361 Location: 3365257..3385702 Organism: Escherichia coli strain 2014C-4639 Replicon: chromosome
Accession: NZ_CP027361 Location: 3365257..3385702 Organism: Escherichia coli strain 2014C-4639 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RR62_RS16525 (3361196) | 3361196..3361705 | - | 510 | WP_000288710.1 | SOS-induced cell division inhibitor SulA | - |
| RR62_RS16530 (3361924) | 3361924..3362553 | + | 630 | WP_000839153.1 | CRP-S regulon transcriptional coactivator Sxy | - |
| RR62_RS16535 (3362516) | 3362516..3364678 | - | 2163 | WP_000875023.1 | YccS family putative transporter | - |
| RR62_RS16540 (3364688) | 3364688..3365134 | - | 447 | WP_001261235.1 | YccF domain-containing protein | - |
| RR62_RS16545 (3365257) | 3365257..3367311 | + | 2055 | WP_001297106.1 | DNA helicase IV | - |
| RR62_RS16550 (3367343) | 3367343..3367801 | - | 459 | WP_000424181.1 | methylglyoxal synthase | - |
| RR62_RS16555 (3367897) | 3367897..3368559 | - | 663 | WP_000847791.1 | DUF2057 family protein | - |
| RR62_RS16560 (3368732) | 3368732..3369145 | + | 414 | WP_000665217.1 | CoA-binding protein | - |
| RR62_RS16565 (3369190) | 3369190..3369507 | - | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| RR62_RS16570 (3369565) | 3369565..3370755 | - | 1191 | WP_000116301.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| RR62_RS16575 (3370850) | 3370850..3371128 | + | 279 | WP_000048244.1 | acylphosphatase | - |
| RR62_RS16580 (3371125) | 3371125..3371454 | - | 330 | WP_000904442.1 | sulfurtransferase TusE | - |
| RR62_RS16585 (3371545) | 3371545..3372204 | - | 660 | WP_000375138.1 | FtsH protease modulator YccA | - |
| RR62_RS16590 (3372613) | 3372613..3373632 | - | 1020 | WP_001299351.1 | hypothetical protein ; Integrase | Integrase |
| RR62_RS16595 (3373610) | 3373610..3373852 | - | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| RR62_RS16600 (3373920) | 3373920..3376370 | - | 2451 | WP_000048583.1 | exonuclease | - |
| RR62_RS16605 (3376464) | 3376464..3376655 | - | 192 | WP_001098307.1 | DUF1482 family protein | - |
| RR62_RS16610 (3376652) | 3376652..3376840 | - | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| RR62_RS16615 (3377408) | 3377408..3377617 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| RR62_RS16620 (3377618) | 3377618..3378256 | - | 639 | WP_000394543.1 | hypothetical protein | - |
| RR62_RS16625 (3378268) | 3378268..3378420 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| RR62_RS16630 (3378697) | 3378697..3378984 | - | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RR62_RS16635 (3378984) | 3378984..3379175 | - | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| RR62_RS16640 (3379203) | 3379203..3379604 | - | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| RR62_RS16645 (3379713) | 3379713..3379985 | + | 273 | WP_000887453.1 | YdaS family helix-turn-helix protein | - |
| RR62_RS16650 (3379969) | 3379969..3380394 | + | 426 | WP_000693855.1 | toxin YdaT family protein | - |
| RR62_RS16655 (3380601) | 3380601..3381056 | - | 456 | WP_000273724.1 | hypothetical protein | - |
| RR62_RS16660 (3381135) | 3381135..3382250 | + | 1116 | WP_001205821.1 | hypothetical protein | - |
| RR62_RS16665 (3382257) | 3382257..3383003 | + | 747 | WP_000788742.1 | ATP-binding protein | - |
| RR62_RS16670 (3383025) | 3383025..3383795 | + | 771 | WP_000451007.1 | DUF1627 domain-containing protein | - |
| RR62_RS16675 (3383811) | 3383811..3384224 | + | 414 | WP_001151233.1 | DUF977 family protein | - |
| RR62_RS16680 (3384576) | 3384576..3384788 | - | 213 | Protein_3204 | alpha/beta hydrolase | - |
| RR62_RS16690 (3386083) | 3386083..3386661 | - | 579 | Protein_3206 | alpha/beta hydrolase | - |
| RR62_RS27240 (3386923) | 3386923..3387006 | + | 84 | Protein_3207 | ORF6N domain-containing protein | - |
| RR62_RS16695 (3387266) | 3387266..3387421 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| RR62_RS16700 (3387589) | 3387589..3387867 | + | 279 | WP_001341388.1 | hypothetical protein | - |
| RR62_RS16705 (3387869) | 3387869..3388918 | + | 1050 | WP_001265141.1 | DUF968 domain-containing protein | - |
| RR62_RS16710 (3388931) | 3388931..3389302 | + | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RR62_RS16715 (3389292) | 3389292..3389663 | + | 372 | WP_000090265.1 | antiterminator Q family protein | - |
| RR62_RS16720 (3389815) | 3389815..3390634 | + | 820 | Protein_3213 | CPBP family intramembrane metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|