MGE detailed information
MGE type: Prophage MGE length: 69191 bp
Accession: NZ_CP027355 Location: 1521753..1590943 Organism: Escherichia coli strain 2013C-4991 Replicon: chromosome
Accession: NZ_CP027355 Location: 1521753..1590943 Organism: Escherichia coli strain 2013C-4991 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P55_RS08520 () | 1517363..1518004 | + | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
| C6P55_RS08525 () | 1518008..1519378 | + | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| C6P55_RS08530 () | 1519546..1520217 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| C6P55_RS08535 () | 1520217..1521677 | + | 1461 | WP_000735411.1 | two-component system sensor histidine kinase PhoQ | - |
| C6P55_RS08540 () | 1521753..1522874 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| C6P55_RS08545 () | 1522923..1524149 | - | 1227 | WP_000359441.1 | peptidase T | - |
| C6P55_RS08555 () | 1524399..1525535 | + | 1137 | WP_000531601.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C6P55_RS08560 () | 1525519..1526382 | + | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C6P55_RS08570 () | 1526656..1527246 | - | 591 | WP_001132165.1 | hypothetical protein | VF |
| C6P55_RS08575 () | 1527429..1528079 | + | 651 | WP_001144080.1 | hypothetical protein | VF |
| C6P55_RS08580 () | 1528154..1529212 | + | 1059 | WP_001299273.1 | hypothetical protein | VF |
| C6P55_RS08585 () | 1529340..1529975 | - | 636 | WP_012816780.1 | hypothetical protein | VF |
| C6P55_RS08590 () | 1530043..1530624 | - | 582 | WP_001118085.1 | hypothetical protein | VF |
| C6P55_RS08595 () | 1530915..1531490 | - | 576 | WP_001131646.1 | hypothetical protein | VF |
| C6P55_RS08600 () | 1531603..1531872 | - | 270 | WP_001023432.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6P55_RS08605 () | 1531874..1533187 | - | 1314 | WP_106912659.1 | ISNCY family transposase KIS | Transposase |
| C6P55_RS08610 () | 1533252..1533851 | - | 600 | WP_001230428.1 | hypothetical protein | VF |
| C6P55_RS30880 () | 1533918..1537392 | - | 3475 | Protein_1582 | host specificity protein J | - |
| C6P55_RS08635 () | 1537631..1538263 | - | 633 | WP_047085664.1 | tail assembly protein | - |
| C6P55_RS08640 () | 1538209..1538952 | - | 744 | WP_000194787.1 | C40 family peptidase | - |
| C6P55_RS08645 () | 1538963..1539661 | - | 699 | WP_001368648.1 | phage minor tail protein L | - |
| C6P55_RS08650 () | 1539661..1540002 | - | 342 | WP_000807964.1 | phage tail protein | - |
| C6P55_RS08655 () | 1539995..1543237 | - | 3243 | WP_106912660.1 | phage tail tape measure protein | - |
| C6P55_RS08660 () | 1543285..1543494 | - | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| C6P55_RS08665 () | 1543590..1543964 | - | 375 | WP_001030043.1 | phage tail assembly chaperone | - |
| C6P55_RS08670 () | 1543970..1544686 | - | 717 | WP_001275471.1 | tail protein | - |
| C6P55_RS08675 () | 1544752..1545096 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C6P55_RS08680 () | 1545093..1545539 | - | 447 | WP_000573360.1 | HK97 gp10 family phage protein | - |
| C6P55_RS08685 () | 1545536..1545886 | - | 351 | WP_001007901.1 | phage head closure protein | - |
| C6P55_RS08690 () | 1545897..1546223 | - | 327 | WP_000126019.1 | head-tail connector protein | - |
| C6P55_RS08695 () | 1546220..1548804 | - | 2585 | Protein_1595 | phage portal protein | - |
| C6P55_RS08700 () | 1548750..1548971 | - | 222 | WP_001063023.1 | hypothetical protein | - |
| C6P55_RS08705 () | 1549016..1550938 | - | 1923 | WP_106912661.1 | phage major capsid protein | - |
| C6P55_RS08710 () | 1550958..1552571 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| C6P55_RS08715 () | 1552602..1552952 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| C6P55_RS08720 () | 1552949..1553374 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| C6P55_RS08725 () | 1553557..1555218 | - | 1662 | WP_001368604.1 | terminase large subunit | - |
| C6P55_RS08730 () | 1555215..1555778 | - | 564 | WP_000958355.1 | terminase small subunit | - |
| C6P55_RS08740 () | 1556068..1556433 | - | 366 | WP_000829190.1 | HNH endonuclease | - |
| C6P55_RS08745 () | 1556475..1556660 | + | 186 | WP_033803220.1 | YlcI/YnfO family protein | - |
| C6P55_RS08750 () | 1556790..1556930 | - | 141 | WP_000347013.1 | hypothetical protein | - |
| C6P55_RS08760 () | 1557287..1557511 | - | 225 | WP_000735655.1 | hypothetical protein | - |
| C6P55_RS30890 () | 1557576..1557782 | - | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| C6P55_RS08775 () | 1558429..1558962 | - | 534 | WP_001003112.1 | lysozyme | - |
| C6P55_RS08785 () | 1559122..1559394 | + | 273 | WP_000138558.1 | hypothetical protein | - |
| C6P55_RS08790 () | 1559643..1559864 | - | 222 | WP_106912662.1 | class II holin family protein | - |
| C6P55_RS08800 () | 1560148..1561998 | - | 1851 | WP_106912663.1 | DUF1737 domain-containing protein | - |
| C6P55_RS08805 () | 1562406..1562573 | - | 168 | WP_000216623.1 | DUF3927 family protein | - |
| C6P55_RS08810 () | 1562570..1563001 | - | 432 | WP_001380362.1 | tellurite resistance protein | - |
| C6P55_RS08820 () | 1563340..1564451 | + | 1112 | Protein_1614 | IS4 family transposase IS186B | Transposase |
| C6P55_RS08830 () | 1564821..1565870 | - | 1050 | WP_000611213.1 | site-specific DNA-methyltransferase | - |
| C6P55_RS08835 () | 1566021..1566218 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| C6P55_RS08840 () | 1566531..1567073 | - | 543 | WP_000640023.1 | DUF1133 family protein | - |
| C6P55_RS08845 () | 1567082..1567447 | - | 366 | WP_000140011.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6P55_RS08850 () | 1567448..1568503 | - | 1056 | WP_001265092.1 | DUF968 domain-containing protein | - |
| C6P55_RS08855 () | 1568505..1568783 | - | 279 | WP_001341382.1 | hypothetical protein | - |
| C6P55_RS08865 () | 1568951..1569106 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6P55_RS08870 () | 1569664..1570761 | + | 1098 | WP_000156213.1 | beta family protein | - |
| C6P55_RS08875 () | 1570721..1571299 | - | 579 | WP_001204666.1 | sce7726 family protein | - |
| C6P55_RS08880 () | 1571605..1571916 | - | 312 | WP_001002672.1 | hypothetical protein | - |
| C6P55_RS08885 () | 1571909..1572163 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| C6P55_RS08890 () | 1572160..1572582 | - | 423 | WP_106912664.1 | DUF977 family protein | - |
| C6P55_RS08895 () | 1572598..1573233 | - | 636 | Protein_1627 | DUF1627 domain-containing protein | - |
| C6P55_RS08900 () | 1573287..1574500 | + | 1214 | WP_162830753.1 | IS3 family transposase IS629 | Transposase |
| C6P55_RS08905 () | 1574715..1575257 | - | 543 | WP_072130322.1 | replication protein | - |
| C6P55_RS30900 () | 1575169..1576185 | - | 1017 | WP_001262344.1 | hypothetical protein | - |
| C6P55_RS08915 () | 1576257..1576682 | - | 426 | WP_000693918.1 | Rha family transcriptional regulator | - |
| C6P55_RS08920 () | 1576666..1576941 | - | 276 | WP_001048458.1 | helix-turn-helix domain-containing protein | - |
| C6P55_RS08925 () | 1577049..1577549 | + | 501 | WP_000824162.1 | helix-turn-helix transcriptional regulator | - |
| C6P55_RS08930 () | 1577567..1577758 | + | 192 | WP_000100896.1 | hypothetical protein | Antitoxin Detail |
| C6P55_RS08935 () | 1577758..1578048 | + | 291 | WP_014966210.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6P55_RS08940 () | 1578318..1578473 | + | 156 | WP_000379581.1 | DUF1391 family protein | - |
| C6P55_RS08950 () | 1578633..1578851 | + | 219 | WP_001171975.1 | hypothetical protein | - |
| C6P55_RS08960 () | 1579419..1579607 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C6P55_RS08965 () | 1579604..1579795 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C6P55_RS08970 () | 1579888..1582359 | + | 2472 | WP_106912665.1 | exonuclease | - |
| C6P55_RS08975 () | 1582421..1582690 | + | 270 | WP_000003742.1 | excisionase | - |
| C6P55_RS08980 () | 1582659..1583777 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| C6P55_RS08985 () | 1583944..1584738 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| C6P55_RS08990 () | 1584735..1585781 | + | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| C6P55_RS08995 () | 1585839..1586300 | + | 462 | WP_000076376.1 | DUF3592 domain-containing protein | - |
| C6P55_RS09000 () | 1586297..1587084 | + | 788 | Protein_1646 | TPM domain-containing protein | - |
| C6P55_RS09005 () | 1587203..1588042 | - | 840 | WP_033803622.1 | NAD-dependent protein deacylase | - |
| C6P55_RS09010 () | 1588058..1588969 | - | 912 | WP_000291262.1 | N-acetylglucosamine kinase | - |
| C6P55_RS09015 () | 1588998..1590242 | - | 1245 | WP_001251384.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| C6P55_RS09020 () | 1590242..1590943 | - | 702 | WP_001033695.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| C6P55_RS09025 () | 1590936..1592135 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| C6P55_RS09030 () | 1592397..1593470 | + | 1074 | WP_000810262.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|