MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 20446 bp
Accession: NZ_CP027352 Location: 5619417..5639862 Organism: Escherichia coli strain 2012C-4606 Replicon: chromosome
Accession: NZ_CP027352 Location: 5619417..5639862 Organism: Escherichia coli strain 2012C-4606 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYN42_RS30395 () | 5615357..5615866 | - | 510 | WP_000288710.1 | cell division inhibitor SulA | - |
| AYN42_RS30400 () | 5616085..5616713 | + | 629 | Protein_5535 | CRP-S regulon transcriptional coactivator Sxy | - |
| AYN42_RS30405 () | 5616676..5618838 | - | 2163 | WP_000875023.1 | TIGR01666 family membrane protein | - |
| AYN42_RS30410 () | 5618848..5619294 | - | 447 | WP_001261235.1 | YccF domain-containing protein | - |
| AYN42_RS30415 () | 5619417..5621471 | + | 2055 | WP_001297106.1 | DNA helicase IV | - |
| AYN42_RS30420 () | 5621503..5621961 | - | 459 | WP_000424181.1 | methylglyoxal synthase | - |
| AYN42_RS30425 () | 5622057..5622719 | - | 663 | WP_000847791.1 | DUF2057 family protein | - |
| AYN42_RS30430 () | 5622892..5623305 | + | 414 | WP_000665217.1 | CoA-binding protein | - |
| AYN42_RS30435 () | 5623350..5623667 | - | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| AYN42_RS30440 () | 5623725..5624915 | - | 1191 | WP_000116301.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| AYN42_RS30445 () | 5625010..5625288 | + | 279 | WP_000048244.1 | acylphosphatase | - |
| AYN42_RS30450 () | 5625285..5625614 | - | 330 | WP_000904442.1 | sulfurtransferase TusE | - |
| AYN42_RS30455 () | 5625705..5626364 | - | 660 | WP_000375138.1 | FtsH protease modulator YccA | - |
| AYN42_RS30460 () | 5626773..5627792 | - | 1020 | WP_001299351.1 | hypothetical protein ; Integrase | Integrase |
| AYN42_RS30465 () | 5627770..5628012 | - | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| AYN42_RS30470 () | 5628080..5630530 | - | 2451 | WP_106875240.1 | exonuclease | - |
| AYN42_RS30475 () | 5630624..5630815 | - | 192 | WP_001098307.1 | DUF1482 family protein | - |
| AYN42_RS30480 () | 5630812..5631000 | - | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| AYN42_RS30490 () | 5631568..5631777 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| AYN42_RS30495 () | 5631778..5632416 | - | 639 | WP_000394543.1 | hypothetical protein | - |
| AYN42_RS30500 () | 5632428..5632580 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| AYN42_RS30505 () | 5632857..5633144 | - | 288 | WP_001303876.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AYN42_RS30510 () | 5633144..5633335 | - | 192 | WP_000536233.1 | hypothetical protein | Antitoxin Detail |
| AYN42_RS30515 () | 5633363..5633764 | - | 402 | WP_000986592.1 | helix-turn-helix domain-containing protein | - |
| AYN42_RS30520 () | 5633873..5634145 | + | 273 | WP_000887453.1 | helix-turn-helix domain-containing protein | - |
| AYN42_RS30525 () | 5634129..5634554 | + | 426 | WP_000693855.1 | Rha family transcriptional regulator | - |
| AYN42_RS30530 () | 5634761..5635216 | - | 456 | WP_000273724.1 | hypothetical protein | - |
| AYN42_RS30535 () | 5635295..5636410 | + | 1116 | WP_001205821.1 | hypothetical protein | - |
| AYN42_RS30540 () | 5636417..5637163 | + | 747 | WP_000788742.1 | ATP-binding protein | - |
| AYN42_RS30545 () | 5637185..5637955 | + | 771 | WP_000451007.1 | DUF1627 domain-containing protein | - |
| AYN42_RS30550 () | 5637971..5638384 | + | 414 | WP_001151233.1 | DUF977 family protein | - |
| AYN42_RS30555 () | 5638736..5638948 | - | 213 | Protein_5565 | alpha/beta hydrolase | - |
| AYN42_RS30565 () | 5640243..5640821 | - | 579 | Protein_5567 | alpha/beta hydrolase | - |
| AYN42_RS30570 () | 5641426..5641581 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AYN42_RS30575 () | 5641749..5642027 | + | 279 | WP_001341388.1 | hypothetical protein | - |
| AYN42_RS30580 () | 5642029..5643078 | + | 1050 | WP_001265141.1 | DUF968 domain-containing protein | - |
| AYN42_RS30585 () | 5643091..5643462 | + | 372 | WP_001217436.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AYN42_RS30590 () | 5643452..5643823 | + | 372 | WP_000090265.1 | antitermination protein | - |
| AYN42_RS30595 () | 5643975..5644793 | + | 819 | WP_000265267.1 | CPBP family intramembrane metalloprotease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|