MGE detailed information
MGE type: Prophage MGE length: 46128 bp
Accession: NZ_CP027351 Location: 2547876..2594003 Organism: Escherichia coli strain 2014C-3655 Replicon: chromosome
Accession: NZ_CP027351 Location: 2547876..2594003 Organism: Escherichia coli strain 2014C-3655 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND05_RS13640 () | 2543783..2544982 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| ND05_RS13645 () | 2544975..2545676 | + | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| ND05_RS13650 () | 2545676..2546920 | + | 1245 | WP_001251388.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| ND05_RS13655 () | 2546949..2547860 | + | 912 | WP_000291280.1 | N-acetylglucosamine kinase | - |
| ND05_RS13660 () | 2547876..2548697 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| ND05_RS13665 () | 2548853..2549899 | - | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| ND05_RS13670 () | 2549896..2550690 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| ND05_RS13675 () | 2550999..2551202 | + | 204 | WP_000824186.1 | hypothetical protein | - |
| ND05_RS13680 () | 2551180..2551647 | + | 468 | WP_001113310.1 | DUF2335 domain-containing protein | - |
| ND05_RS13685 () | 2551724..2552842 | - | 1119 | WP_000074974.1 | hypothetical protein ; Integrase | Integrase |
| ND05_RS13690 () | 2552811..2553080 | - | 270 | WP_000003742.1 | excisionase | - |
| ND05_RS13695 () | 2553142..2555613 | - | 2472 | WP_000048560.1 | exonuclease | - |
| ND05_RS13700 () | 2555737..2555958 | - | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| ND05_RS13710 () | 2556671..2556970 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| ND05_RS13720 () | 2557323..2557601 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ND05_RS13725 () | 2557603..2557794 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| ND05_RS13730 () | 2557815..2558186 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| ND05_RS13735 () | 2558284..2558586 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| ND05_RS13740 () | 2558583..2559008 | + | 426 | WP_000693944.1 | Rha family transcriptional regulator | - |
| ND05_RS13745 () | 2559031..2559993 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| ND05_RS13750 () | 2560034..2560456 | + | 423 | WP_001151187.1 | DUF977 family protein | - |
| ND05_RS13755 () | 2560562..2560774 | + | 213 | WP_000935423.1 | hypothetical protein | - |
| ND05_RS13760 () | 2560807..2561025 | + | 219 | WP_000209148.1 | DUF4014 family protein | - |
| ND05_RS29655 () | 2561027..2561185 | + | 159 | WP_001370098.1 | hypothetical protein | - |
| ND05_RS13765 () | 2561189..2562745 | - | 1557 | WP_001066422.1 | IS66 family transposase ISSfl3 | Transposase |
| ND05_RS13770 () | 2562765..2563112 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| ND05_RS13775 () | 2563109..2563783 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| ND05_RS13780 () | 2563789..2564007 | + | 219 | WP_136865621.1 | hypothetical protein | - |
| ND05_RS13785 () | 2564018..2564887 | + | 870 | WP_000208016.1 | DUF551 domain-containing protein | - |
| ND05_RS13790 () | 2565003..2565107 | + | 105 | WP_001278454.1 | hypothetical protein | - |
| ND05_RS13800 () | 2565353..2565508 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| ND05_RS13805 () | 2565626..2565973 | + | 348 | WP_000756560.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| ND05_RS13810 () | 2566094..2566366 | + | 273 | WP_000046991.1 | hypothetical protein | - |
| ND05_RS13815 () | 2566368..2567417 | + | 1050 | WP_001265272.1 | DUF968 domain-containing protein | - |
| ND05_RS13820 () | 2567430..2567804 | + | 375 | WP_001121083.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ND05_RS13825 () | 2567801..2568622 | + | 822 | WP_000762899.1 | antitermination protein | - |
| ND05_RS13830 () | 2568848..2569045 | + | 198 | WP_000917750.1 | hypothetical protein | - |
| ND05_RS13835 () | 2569196..2570254 | + | 1059 | WP_000935558.1 | site-specific DNA-methyltransferase | - |
| ND05_RS13855 () | 2570713..2571144 | + | 432 | Protein_2404 | tellurite resistance TerB family protein | - |
| ND05_RS13860 () | 2571141..2571272 | + | 132 | WP_001344632.1 | DUF3927 family protein | - |
| ND05_RS13865 () | 2571715..2573565 | + | 1851 | WP_032212668.1 | SASA family carbohydrate esterase | - |
| ND05_RS13875 () | 2574003..2574218 | + | 216 | WP_053897820.1 | class II holin family protein | - |
| ND05_RS13890 () | 2575787..2576059 | - | 273 | WP_000138558.1 | hypothetical protein | - |
| ND05_RS13900 () | 2576219..2576752 | + | 534 | WP_001003112.1 | lysozyme | - |
| ND05_RS29665 () | 2577399..2577605 | + | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| ND05_RS13915 () | 2577670..2577894 | + | 225 | WP_000735655.1 | hypothetical protein | - |
| ND05_RS13925 () | 2578251..2578391 | + | 141 | WP_000347013.1 | hypothetical protein | - |
| ND05_RS13930 () | 2578521..2578634 | - | 114 | WP_032208049.1 | DUF3950 domain-containing protein | - |
| ND05_RS13935 () | 2578702..2579042 | + | 341 | Protein_2415 | IS3 family transposase ISSfl10 | Transposase |
| ND05_RS13940 () | 2579042..2579393 | + | 352 | Protein_2416 | hypothetical protein | - |
| ND05_RS13945 () | 2579390..2579716 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| ND05_RS13950 () | 2579727..2580077 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| ND05_RS13955 () | 2580074..2580520 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| ND05_RS13960 () | 2580517..2580861 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| ND05_RS13965 () | 2580927..2581643 | + | 717 | WP_001275483.1 | immunoglobulin domain-containing protein | - |
| ND05_RS13970 () | 2581658..2582032 | + | 375 | WP_000710949.1 | phage tail assembly chaperone | - |
| ND05_RS13975 () | 2582128..2582337 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| ND05_RS13980 () | 2582389..2585631 | + | 3243 | WP_000212947.1 | phage tail tape measure protein | - |
| ND05_RS13985 () | 2585624..2585965 | + | 342 | WP_000807954.1 | phage tail protein | - |
| ND05_RS13990 () | 2585965..2586663 | + | 699 | WP_032212666.1 | phage minor tail protein L | - |
| ND05_RS13995 () | 2586674..2587418 | + | 745 | Protein_2427 | C40 family peptidase | - |
| ND05_RS14000 () | 2587364..2587993 | + | 630 | WP_124983447.1 | tail assembly protein | - |
| ND05_RS14005 () | 2588234..2591710 | + | 3477 | WP_106914018.1 | host specificity protein J | - |
| ND05_RS14010 () | 2591779..2592354 | + | 576 | WP_024174257.1 | Attachment invasion locus protein | VF |
| ND05_RS14015 () | 2592419..2593732 | + | 1314 | WP_032212660.1 | ISNCY family transposase KIS | Transposase |
| ND05_RS14020 () | 2593734..2594003 | + | 270 | WP_032212659.1 | phage tail fiber C-terminal domain-containing protein | - |
| ND05_RS14025 () | 2594129..2594881 | - | 753 | WP_012817749.1 | type III effector | - |
| ND05_RS14040 () | 2595997..2597115 | + | 1119 | WP_001370123.1 | hydrogenase 1 small subunit | - |
| ND05_RS14045 () | 2597112..2598905 | + | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|