MGE detailed information
MGE type: Conjugative plasmid MGE length: 70613 bp
Accession: NZ_CP027348 Location: 1..70613 Organism: Escherichia coli strain 2013C-4361 Replicon: plasmid unnamed
Accession: NZ_CP027348 Location: 1..70613 Organism: Escherichia coli strain 2013C-4361 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZF34_RS29090 () | 146..4109 | - | 3964 | Protein_0 | Serine protease EspP | VF |
| AZF34_RS28285 () | 5695..6624 | + | 930 | Protein_2 | Catalase-peroxidase | VF |
| AZF34_RS28290 () | 6668..7057 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| AZF34_RS28295 () | 7171..7937 | + | 767 | Protein_4 | IS3 family transposase | - |
| AZF34_RS28300 () | 8017..8412 | - | 396 | WP_000445936.1 | plasmid partitioning/stability family protein | - |
| AZF34_RS28305 () | 8412..9371 | - | 960 | WP_000921961.1 | plasmid segregation protein ParM | - |
| AZF34_RS28310 () | 9644..10546 | + | 903 | WP_077629034.1 | DUF1281 domain-containing protein | - |
| AZF34_RS28315 () | 10543..10855 | + | 313 | Protein_8 | hypothetical protein | - |
| AZF34_RS28320 () | 10931..11302 | + | 372 | WP_000086162.1 | restriction endonuclease subunit M | - |
| AZF34_RS28325 () | 11409..12596 | - | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| AZF34_RS28330 () | 12596..12961 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| AZF34_RS28345 () | 13334..13636 | + | 303 | WP_072106536.1 | antirestriction protein | - |
| AZF34_RS28350 () | 13683..14105 | + | 423 | WP_000271680.1 | DUF1380 family protein | - |
| AZF34_RS28355 () | 14102..14293 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| AZF34_RS29095 () | 14569..14793 | - | 225 | WP_013279293.1 | hypothetical protein | - |
| AZF34_RS28370 () | 15331..15561 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AZF34_RS28375 () | 15613..16974 | + | 1362 | WP_000170683.1 | DUF3560 domain-containing protein | - |
| AZF34_RS28380 () | 17019..17581 | + | 563 | Protein_18 | class I SAM-dependent methyltransferase | - |
| AZF34_RS29100 () | 17733..18023 | + | 291 | WP_073972341.1 | hypothetical protein | - |
| AZF34_RS28400 () | 18496..19023 | + | 528 | WP_000290792.1 | single-stranded DNA-binding protein | - |
| AZF34_RS28405 () | 19079..19312 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| AZF34_RS28410 () | 19371..21329 | + | 1959 | WP_001145472.1 | ParB/RepB/Spo0J family partition protein | - |
| AZF34_RS28415 () | 21384..21818 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| AZF34_RS28420 () | 21815..22534 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| AZF34_RS29105 () | 22546..22734 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 22546..22770 | + | 225 | NuclAT_0 | - | - |
| - () | 22546..22770 | + | 225 | NuclAT_0 | - | - |
| - () | 22546..22770 | + | 225 | NuclAT_0 | - | - |
| - () | 22546..22770 | + | 225 | NuclAT_0 | - | - |
| - () | 22703..22768 | + | 66 | - | - | Antitoxin Detail |
| AZF34_RS28425 () | 22814..22972 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| AZF34_RS29340 () | 23326..23550 | - | 225 | WP_001427866.1 | hypothetical protein | - |
| AZF34_RS28445 () | 23894..24181 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| AZF34_RS28450 () | 24301..25122 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| AZF34_RS28455 () | 25419..25928 | - | 510 | Protein_30 | transglycosylase SLT domain-containing protein | - |
| AZF34_RS28460 () | 26342..26724 | + | 383 | Protein_31 | relaxosome protein TraM | - |
| AZF34_RS28465 () | 26911..27600 | + | 690 | WP_000283394.1 | conjugal transfer transcriptional regulator TraJ | - |
| AZF34_RS28470 () | 27699..28094 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| AZF34_RS28475 () | 28127..28486 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| AZF34_RS28480 () | 28501..28812 | + | 312 | WP_000012104.1 | type IV conjugative transfer system protein TraL | - |
| AZF34_RS28485 () | 28834..29400 | + | 567 | WP_000399800.1 | type IV conjugative transfer system protein TraE | - |
| AZF34_RS28490 () | 29411..30115 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AZF34_RS28495 () | 30115..31542 | + | 1428 | WP_000146670.1 | conjugal transfer protein TraB | - |
| AZF34_RS28500 () | 31532..32122 | + | 591 | WP_000002783.1 | conjugal transfer protein TraP | - |
| AZF34_RS28505 () | 32109..32231 | + | 123 | WP_001369729.1 | DUF2689 domain-containing protein | - |
| AZF34_RS28510 () | 32212..32811 | + | 600 | Protein_41 | conjugal transfer protein TraH | - |
| AZF34_RS28515 () | 32808..33971 | + | 1164 | Protein_42 | conjugal transfer mating pair stabilization protein TraG | - |
| AZF34_RS28525 () | 35278..36945 | + | 1668 | Protein_44 | conjugal transfer protein TraG | - |
| AZF34_RS28530 () | 36942..37451 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| AZF34_RS28535 () | 37465..38196 | + | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| AZF34_RS28540 () | 38449..40602 | + | 2154 | WP_032272558.1 | type IV conjugative transfer system coupling protein TraD | - |
| AZF34_RS28550 () | 40602..45870 | + | 5269 | Protein_48 | Multifunctional conjugation protein TraI | Relaxase |
| AZF34_RS28555 () | 45890..46635 | + | 746 | Protein_49 | conjugal transfer pilus acetylase TraX | - |
| AZF34_RS28560 () | 46694..47554 | + | 861 | WP_000704529.1 | putative protein YcjY | VF |
| AZF34_RS28565 () | 47657..48218 | + | 562 | Protein_51 | fertility inhibition protein FinO | - |
| AZF34_RS28570 () | 48368..48748 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| AZF34_RS28575 () | 48745..49093 | + | 349 | Protein_53 | IS66 family transposase ISEc8 | Transposase |
| AZF34_RS28580 () | 49143..50681 | + | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| AZF34_RS28585 () | 50720..51373 | + | 654 | Protein_55 | IS3 family transposase ISEc48 | Transposase |
| AZF34_RS28590 () | 51500..52938 | - | 1439 | Protein_56 | Hemolysin secretion protein D, chromosomal | VF |
| AZF34_RS28595 () | 52942..55063 | - | 2122 | Protein_57 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| AZF34_RS28600 () | 55113..58109 | - | 2997 | WP_000217744.1 | Hemolysin, chromosomal | VF |
| AZF34_RS29110 () | 58111..58625 | - | 515 | Protein_59 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| AZF34_RS28620 () | 59148..59644 | - | 497 | Protein_60 | IS3 family transposase IS629 | Transposase |
| AZF34_RS28625 () | 59735..60100 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| AZF34_RS28630 () | 60100..61331 | + | 1232 | Protein_62 | IS91 family transposase ISEc37 | Transposase |
| AZF34_RS28635 () | 61474..61625 | - | 152 | Protein_63 | IS3 family transposase IS629 | Transposase |
| AZF34_RS28645 () | 63094..63913 | + | 820 | Protein_64 | polysaccharide deacetylase family protein | - |
| AZF34_RS29345 () | 63913..64194 | + | 282 | WP_167586641.1 | glycosyltransferase family 4 protein | - |
| AZF34_RS29350 () | 64323..65018 | + | 696 | WP_001417412.1 | glycosyltransferase | - |
| AZF34_RS28655 () | 65112..66833 | + | 1722 | WP_000550555.1 | phosphoethanolamine transferase CptA | - |
| AZF34_RS28660 () | 66907..67905 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AZF34_RS28665 () | 67958..68146 | + | 189 | Protein_69 | hypothetical protein | - |
| AZF34_RS28670 () | 68209..69747 | - | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| AZF34_RS28675 () | 69797..70144 | - | 348 | Protein_71 | IS66 family insertion sequence element accessory protein TnpB | - |
| AZF34_RS28680 () | 70141..70521 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|