MGE detailed information
MGE type: Genomic_island MGE length: 41282 bp
Accession: NZ_CP027342 Location: 88244..129525 Organism: Escherichia coli strain 2014C-4587 Replicon: chromosome
Accession: NZ_CP027342 Location: 88244..129525 Organism: Escherichia coli strain 2014C-4587 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N23_RS00450 () | 83563..84465 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| C6N23_RS00455 () | 84485..84988 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| C6N23_RS00460 () | 85001..85531 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| C6N23_RS00465 () | 85541..88177 | - | 2637 | WP_000121021.1 | fimbrial usher FimD | - |
| C6N23_RS00470 () | 88244..88969 | - | 726 | WP_000066573.1 | hypothetical protein | VF |
| C6N23_RS00475 () | 89006..89545 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| C6N23_RS00480 () | 89610..90158 | - | 549 | WP_000695543.1 | hypothetical protein | VF |
| C6N23_RS00490 () | 90638..91234 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| C6N23_RS00495 () | 91712..92314 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| C6N23_RS00510 () | 93769..94485 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C6N23_RS00515 () | 94505..95611 | + | 1107 | WP_001542605.1 | N-acetylneuraminate epimerase | - |
| C6N23_RS00520 () | 95676..96655 | + | 980 | Protein_90 | sialate O-acetylesterase | - |
| C6N23_RS00525 () | 96663..96785 | - | 123 | WP_001338066.1 | hypothetical protein | - |
| C6N23_RS00530 () | 96867..97739 | + | 873 | WP_000168559.1 | HNH endonuclease | - |
| C6N23_RS00535 () | 97909..99984 | + | 2076 | WP_033547770.1 | AAA family ATPase | - |
| C6N23_RS00540 () | 99977..101320 | + | 1344 | WP_000504877.1 | McrC family protein | - |
| C6N23_RS00545 () | 101317..101703 | + | 387 | WP_000148644.1 | hypothetical protein | - |
| C6N23_RS00550 () | 101754..103901 | + | 2148 | WP_001040176.1 | N-6 DNA methylase | - |
| C6N23_RS00555 () | 103901..105373 | + | 1473 | WP_028985238.1 | restriction endonuclease subunit S | - |
| C6N23_RS00560 () | 105391..106677 | + | 1287 | WP_000377418.1 | hypothetical protein | - |
| C6N23_RS00565 () | 106674..110960 | + | 4287 | WP_028985239.1 | hypothetical protein | - |
| C6N23_RS00570 () | 110971..111819 | + | 849 | WP_028985240.1 | hypothetical protein | - |
| C6N23_RS00575 () | 111822..112979 | + | 1158 | WP_001004904.1 | hypothetical protein | - |
| C6N23_RS00580 () | 112969..114654 | + | 1686 | WP_000323665.1 | ATP-binding protein | - |
| C6N23_RS00585 () | 114791..115204 | + | 414 | WP_001368082.1 | hypothetical protein | - |
| C6N23_RS00590 () | 115201..116670 | + | 1470 | WP_001022619.1 | Serine/threonine-protein kinase PknD | VF |
| C6N23_RS00595 () | 116872..118136 | - | 1265 | Protein_105 | hypothetical protein ; Integrase | Integrase |
| C6N23_RS00600 () | 118633..119007 | - | 375 | WP_033805147.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6N23_RS00605 () | 119046..119411 | - | 366 | WP_033805146.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6N23_RS00610 () | 119437..119658 | - | 222 | WP_033805145.1 | DUF987 domain-containing protein | - |
| C6N23_RS00615 () | 119655..120197 | - | 543 | WP_033805144.1 | DNA repair protein RadC | - |
| C6N23_RS00620 () | 120210..120650 | - | 441 | WP_033805143.1 | antirestriction protein | - |
| C6N23_RS00625 () | 120681..121502 | - | 822 | WP_047082063.1 | DUF945 domain-containing protein | - |
| C6N23_RS00630 () | 121604..121834 | - | 231 | WP_033805141.1 | DUF905 domain-containing protein | - |
| C6N23_RS00635 () | 121906..122355 | - | 450 | WP_033805140.1 | hypothetical protein | - |
| C6N23_RS00640 () | 122352..122804 | - | 453 | WP_033805139.1 | hypothetical protein | - |
| C6N23_RS00645 () | 122841..123410 | - | 570 | WP_033805138.1 | hypothetical protein | - |
| C6N23_RS00650 () | 123410..124114 | - | 705 | WP_033805137.1 | WYL domain-containing protein | - |
| C6N23_RS00655 () | 124314..125189 | - | 876 | WP_033805136.1 | GTPase family protein | - |
| C6N23_RS00660 () | 125290..126066 | - | 777 | WP_033805151.1 | hypothetical protein | - |
| C6N23_RS00665 () | 126706..126912 | + | 207 | WP_033805135.1 | AlpA family transcriptional regulator | - |
| C6N23_RS00670 () | 127009..127602 | + | 594 | WP_033805134.1 | hypothetical protein | - |
| C6N23_RS00675 () | 127799..128374 | + | 576 | WP_033805133.1 | inovirus-type Gp2 protein | - |
| C6N23_RS00680 () | 128546..128863 | + | 318 | WP_045133805.1 | hypothetical protein | - |
| C6N23_RS00685 () | 129163..129525 | + | 363 | WP_000859002.1 | 6-carboxytetrahydropterin synthase QueD | - |
| C6N23_RS00690 () | 129582..131837 | - | 2256 | WP_001083255.1 | hypothetical protein | - |
| C6N23_RS00695 () | 131834..132376 | - | 543 | WP_001097549.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|