NZ_CP0273421435275..1623108

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 187834 bp
Accession: NZ_CP027342        Location: 1435275..1623108         Organism: Escherichia coli strain 2014C-4587       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C6N23_RS07295 () 1431604..1433349 - 1746 WP_000918827.1 DNA primase -
C6N23_RS07300 () 1433460..1433675 - 216 WP_001144069.1 30S ribosomal protein S21 -
C6N23_RS07310 () 1433913..1434926 + 1014 WP_001264365.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
C6N23_RS07315 () 1434969..1436432 - 1464 WP_000804929.1 L-tartrate/succinate antiporter -
C6N23_RS07320 () 1436481..1437086 - 606 WP_000722957.1 L(+)-tartrate dehydratase subunit beta -
C6N23_RS07325 () 1437083..1437994 - 912 WP_000986797.1 L(+)-tartrate dehydratase subunit alpha -
C6N23_RS07335 () 1438201..1439133 + 933 WP_000935206.1 DNA-binding transcriptional activator TtdR -
C6N23_RS07340 () 1439146..1439763 - 618 WP_001272796.1 glycerol-3-phosphate 1-O-acyltransferase PlsY -
C6N23_RS07345 () 1439868..1440236 + 369 WP_001295541.1 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase -
C6N23_RS07350 () 1440326..1441147 + 822 WP_001305111.1 undecaprenyl-diphosphate phosphatase -
C6N23_RS07355 () 1441310..1442548 - 1239 WP_000708500.1 fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca -
C6N23_RS07360 () 1442612..1443232 - 621 WP_001125332.1 SH3 domain-containing protein -
C6N23_RS07370 () 1443474..1444775 + 1302 WP_000046264.1 inorganic triphosphatase -
C6N23_RS07375 () 1444798..1447638 + 2841 WP_001352534.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
C6N23_RS07380 () 1447686..1449119 + 1434 WP_000869178.1 Bifunctional protein HldE VF
- () 1449199..1449340 + 142 NuclAT_6 - -
- () 1449199..1449340 + 142 NuclAT_6 - -
- () 1449199..1449340 + 142 NuclAT_6 - -
- () 1449199..1449340 + 142 NuclAT_6 - -
C6N23_RS07385 () 1449239..1449298 - 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
- () 1449575..1449716 + 142 NuclAT_1 - -
- () 1449575..1449716 + 142 NuclAT_1 - -
- () 1449575..1449716 + 142 NuclAT_1 - -
- () 1449575..1449716 + 142 NuclAT_1 - -
- () 1449575..1449716 + 142 NuclAT_7 - -
- () 1449575..1449716 + 142 NuclAT_7 - -
- () 1449575..1449716 + 142 NuclAT_7 - -
- () 1449575..1449716 + 142 NuclAT_7 - -
C6N23_RS07395 () 1449615..1449674 - 60 WP_001387081.1 type I toxin-antitoxin system Ibs family toxin -
C6N23_RS07400 () 1449913..1451574 - 1662 WP_000341060.1 flotillin family protein -
C6N23_RS07405 () 1451601..1452230 - 630 WP_000599947.1 DUF1449 family protein -
C6N23_RS07410 () 1452499..1452699 + 201 WP_000350095.1 cell surface composition regulator GlgS -
C6N23_RS07415 () 1452742..1453806 - 1065 WP_001269793.1 fimbrial protein -
C6N23_RS07420 () 1453808..1454557 - 750 WP_001269825.1 hypothetical protein VF
C6N23_RS07425 () 1454573..1457077 - 2505 WP_000277135.1 hypothetical protein VF
C6N23_RS07430 () 1457137..1457688 - 552 WP_001272146.1 hypothetical protein VF
C6N23_RS07435 () 1457971..1458261 - 291 WP_001297598.1 IS1182 family transposase ISBusp4 Transposase
C6N23_RS07440 () 1458635..1459288 + 654 WP_001076983.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
C6N23_RS07445 () 1459549..1459719 + 171 WP_000469266.1 hypothetical protein -
C6N23_RS07450 () 1459777..1460550 - 774 WP_001295627.1 zinc transporter ZupT -
C6N23_RS07455 () 1460693..1461481 + 789 WP_001299419.1 4,5-DOPA dioxygenase extradiol -
C6N23_RS07460 () 1461519..1462679 - 1161 WP_000442860.1 glutathionylspermidine synthase family protein -
C6N23_RS07465 () 1462685..1463356 - 672 WP_000831543.1 DUF1190 family protein -
C6N23_RS07475 () 1463504..1464985 - 1482 WP_000735278.1 outer membrane channel protein TolC -
C6N23_RS07480 () 1465190..1465819 + 630 WP_000917117.1 ADP-ribose diphosphatase -
C6N23_RS07485 () 1465820..1466242 + 423 WP_000833393.1 DUF1249 family protein -
C6N23_RS07490 () 1466267..1467094 + 828 WP_000444746.1 3',5'-cyclic-AMP phosphodiesterase -
C6N23_RS07495 () 1467094..1467675 + 582 WP_000105733.1 esterase YqiA -
C6N23_RS07500 () 1467704..1469596 + 1893 WP_000195296.1 DNA topoisomerase IV subunit B -
C6N23_RS07505 () 1469644..1469958 - 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
C6N23_RS07510 () 1469989..1470570 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
C6N23_RS07515 () 1470889..1471221 + 333 WP_000912120.1 DUF2645 family protein -
C6N23_RS07520 () 1471267..1472616 - 1350 WP_000673354.1 two-component system sensor histidine kinase QseC -
C6N23_RS07525 () 1472613..1473272 - 660 WP_001221502.1 Regulator of RpoS VF
C6N23_RS07530 () 1473424..1473816 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
C6N23_RS07535 () 1473869..1474351 + 483 WP_000183494.1 transcriptional regulator -
C6N23_RS07545 () 1474897..1477155 + 2259 WP_001281881.1 DNA topoisomerase IV subunit A -
C6N23_RS07550 () 1477388..1478125 + 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
C6N23_RS07555 () 1478200..1479612 + 1413 WP_000059395.1 cell division protein FtsP -
C6N23_RS07560 () 1479723..1481942 + 2220 WP_000095187.1 YgiQ family radical SAM protein -
C6N23_RS07565 () 1481985..1482242 - 258 WP_000848528.1 lipoprotein YqhH -
C6N23_RS07570 () 1482293..1483219 - 927 WP_000691598.1 YbjP/YqhG family protein -
C6N23_RS07575 () 1483419..1484246 - 828 WP_000013149.1 2,5-didehydrogluconate reductase DkgA -
C6N23_RS07580 () 1484351..1485514 - 1164 WP_001058807.1 alcohol dehydrogenase -
C6N23_RS07585 () 1485708..1486607 + 900 WP_000817717.1 DNA-binding transcriptional regulator YqhC -
C6N23_RS07590 () 1486647..1487306 - 660 WP_000268419.1 DedA family protein -
C6N23_RS07595 () 1487446..1488633 - 1188 WP_000763931.1 cystathionine beta-lyase -
C6N23_RS07605 () 1488885..1489619 + 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
C6N23_RS07610 () 1489626..1490051 + 426 WP_001240712.1 TonB system transport protein ExbD -
C6N23_RS07615 () 1490323..1491207 - 885 WP_000018760.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
C6N23_RS07620 () 1491398..1491892 + 495 WP_000439331.1 TIGR00645 family protein -
C6N23_RS07625 () 1491932..1492972 - 1041 WP_000262156.1 L-glyceraldehyde 3-phosphate reductase -
C6N23_RS07630 () 1493129..1494016 + 888 WP_001297303.1 dienelactone hydrolase family protein -
C6N23_RS07635 () 1494135..1494422 + 288 WP_001059136.1 DUF2623 domain-containing protein -
C6N23_RS07645 () 1494611..1495729 + 1119 WP_000145410.1 hydrogenase 2 small subunit -
C6N23_RS07650 () 1495732..1496718 + 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
C6N23_RS07655 () 1496708..1497885 + 1178 Protein_1372 Ni/Fe-hydrogenase cytochrome b subunit -
C6N23_RS07660 () 1497882..1499585 + 1704 WP_000083065.1 hydrogenase 2 large subunit -
C6N23_RS07665 () 1499585..1500079 + 495 WP_001221946.1 HyaD/HybD family hydrogenase maturation endopeptidase -
C6N23_RS07670 () 1500072..1500560 + 489 WP_000134014.1 hydrogenase-2 assembly chaperone -
C6N23_RS07675 () 1500553..1500894 + 342 WP_000544953.1 hydrogenase maturation nickel metallochaperone HypA -
C6N23_RS07680 () 1500907..1501155 + 249 WP_000334896.1 hydrogenase maturation factor HybG -
C6N23_RS07685 () 1501277..1502257 - 981 WP_000399648.1 IS110 family transposase IS621 Transposase
C6N23_RS07695 () 1502557..1503423 - 867 WP_001352536.1 glutathione-dependent disulfide-bond oxidoreductase -
C6N23_RS07700 () 1503628..1505487 + 1860 WP_001345957.1 bifunctional glutathionylspermidine amidase/synthase -
C6N23_RS07705 () 1505779..1507278 + 1500 WP_000933296.1 inorganic phosphate transporter PitB -
C6N23_RS07710 () 1507327..1508019 - 693 WP_001190783.1 thymidylate kinase -
C6N23_RS07715 () 1508193..1508906 + 714 WP_106914228.1 thymidylate kinase -
C6N23_RS07720 () 1508938..1509696 + 759 WP_000339512.1 hypothetical protein -
C6N23_RS07725 () 1509742..1511091 + 1350 WP_000896880.1 lipopolysaccharide biosynthesis protein -
C6N23_RS07730 () 1511091..1511915 + 825 WP_000984976.1 hypothetical protein -
C6N23_RS07735 () 1511927..1512487 + 561 WP_001299422.1 YtfJ family protein -
C6N23_RS07740 () 1512518..1513588 + 1071 WP_000779661.1 LPS export ABC transporter permease LptF -
C6N23_RS07745 () 1513585..1514664 + 1080 WP_001300858.1 LPS export ABC transporter permease LptG -
C6N23_RS07750 () 1514700..1515872 - 1173 WP_000524972.1 8-amino-7-oxononanoate synthase VF
C6N23_RS07755 () 1515872..1516120 - 249 WP_000248097.1 acyl carrier protein -
C6N23_RS07760 () 1516152..1517066 - 915 WP_001077143.1 NAD-dependent epimerase/dehydratase family protein -
C6N23_RS07765 () 1517063..1518784 - 1722 WP_001355868.1 2-succinylbenzoate--CoA ligase VF
C6N23_RS07775 () 1519155..1520297 + 1143 WP_000388786.1 DNA-binding protein -
C6N23_RS07780 () 1520304..1521068 - 765 WP_001297764.1 transcriptional regulator GlcC -
C6N23_RS07785 () 1521319..1522818 + 1500 WP_000026148.1 glycolate oxidase subunit GlcD -
C6N23_RS07790 () 1522818..1523870 + 1053 WP_000943057.1 glycolate oxidase subunit GlcE -
C6N23_RS07795 () 1523881..1525104 + 1224 WP_001194666.1 glycolate oxidase subunit GlcF -
C6N23_RS07800 () 1525109..1525513 + 405 WP_000853256.1 protein GlcG -
C6N23_RS07805 () 1525535..1527706 + 2172 WP_000084065.1 malate synthase G -
C6N23_RS07810 () 1528062..1529744 + 1683 WP_000259303.1 glycolate permease GlcA -
C6N23_RS07820 () 1530230..1534798 + 4569 WP_001748751.1 hypothetical protein VF
C6N23_RS07825 () 1534938..1535747 + 810 WP_001365924.1 hypothetical protein VF
C6N23_RS07830 () 1535813..1536223 + 411 WP_001298744.1 type II secretion system pilot lipoprotein GspS-beta -
C6N23_RS07835 () 1536241..1537200 + 960 WP_000135073.1 hypothetical protein VF
C6N23_RS07840 () 1537230..1539290 + 2061 WP_000498824.1 hypothetical protein VF
C6N23_RS07845 () 1539290..1540783 + 1494 WP_000249348.1 hypothetical protein VF
C6N23_RS07850 () 1540783..1542006 + 1224 WP_001173448.1 hypothetical protein VF
C6N23_RS07855 () 1542023..1542478 + 456 WP_001087296.1 hypothetical protein VF
C6N23_RS07860 () 1542482..1543045 + 564 WP_001115140.1 hypothetical protein VF
C6N23_RS07865 () 1543042..1543413 + 372 WP_000820125.1 hypothetical protein VF
C6N23_RS07870 () 1543410..1544009 + 600 WP_001255040.1 hypothetical protein VF
C6N23_RS07875 () 1544012..1544989 + 978 WP_000633238.1 hypothetical protein VF
C6N23_RS07880 () 1544986..1546164 + 1179 WP_032283517.1 hypothetical protein VF
C6N23_RS07885 () 1546166..1546702 + 537 WP_000942786.1 hypothetical protein VF
C6N23_RS07890 () 1547045..1547887 - 843 WP_001280537.1 DUF4942 domain-containing protein -
C6N23_RS07895 () 1547972..1548169 - 198 WP_000839249.1 DUF957 domain-containing protein -
C6N23_RS07900 () 1548181..1548669 - 489 WP_000779174.1 hypothetical protein -
C6N23_RS07905 () 1548666..1549043 - 378 WP_000854904.1 TA system toxin CbtA family protein Toxin Detail
C6N23_RS07910 () 1549090..1549452 - 363 WP_024210899.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
C6N23_RS07915 () 1549615..1549836 - 222 WP_000692311.1 DUF987 domain-containing protein -
C6N23_RS07920 () 1549899..1550375 - 477 WP_001186727.1 RadC family protein -
C6N23_RS07925 () 1550391..1550876 - 486 WP_047086999.1 antirestriction protein -
C6N23_RS07930 () 1550931..1551749 - 819 WP_001234620.1 DUF945 domain-containing protein -
C6N23_RS07940 () 1551849..1552082 - 234 WP_001119729.1 DUF905 family protein -
C6N23_RS07945 () 1552161..1552616 - 456 WP_000581504.1 hypothetical protein -
C6N23_RS07950 () 1552692..1555208 - 2517 WP_106914229.1 hypothetical protein -
C6N23_RS07955 () 1555329..1558448 - 3120 WP_106914230.1 autotransporter adhesin Ag43 -
C6N23_RS07960 () 1558782..1559654 - 873 WP_106914231.1 GTPase family protein -
C6N23_RS07970 () 1560883..1562367 + 1485 WP_001297234.1 DUF3987 domain-containing protein -
C6N23_RS07985 () 1562689..1563291 - 603 WP_000804452.1 hypothetical protein -
C6N23_RS07990 () 1563378..1563584 - 207 WP_000632607.1 AlpA family transcriptional regulator -
C6N23_RS07995 () 1564336..1564485 + 150 WP_064758499.1 hemolysin activation protein -
C6N23_RS08005 () 1565226..1565795 + 570 WP_106914233.1 inovirus Gp2 family protein -
C6N23_RS08010 () 1566053..1566436 + 384 WP_136760675.1 hypothetical protein -
C6N23_RS08015 () 1566433..1566858 + 426 WP_001013306.1 hypothetical protein -
C6N23_RS08020 () 1567107..1567304 + 198 WP_000553835.1 inovirus-type Gp2 protein -
C6N23_RS08025 () 1567398..1567898 + 501 WP_072096384.1 inovirus-type Gp2 protein -
C6N23_RS08030 () 1568248..1568745 + 498 WP_021552435.1 hypothetical protein -
C6N23_RS08035 () 1568834..1569457 + 624 WP_001366001.1 hypothetical protein -
C6N23_RS08040 () 1569553..1569786 + 234 WP_000124190.1 hypothetical protein -
C6N23_RS08045 () 1569839..1570030 - 192 WP_001287885.1 DUF4222 domain-containing protein -
C6N23_RS08050 () 1570706..1572358 + 1653 WP_106914339.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein -
C6N23_RS08055 () 1572368..1572895 + 528 WP_047086663.1 hypothetical protein VF
C6N23_RS08060 () 1572911..1581883 + 8973 WP_106914235.1 hypothetical protein VF
C6N23_RS08065 () 1581880..1582137 + 258 WP_000877779.1 hypothetical protein -
C6N23_RS26995 () 1582692..1585364 + 2673 Protein_1447 hypothetical protein VF
C6N23_RS08090 () 1585973..1586521 + 549 WP_106914236.1 hypothetical protein VF
C6N23_RS08095 () 1586699..1588444 + 1746 WP_136760679.1 NERD domain-containing protein/DEAD/DEAH box helicase -
C6N23_RS27225 () 1588928..1589191 + 264 Protein_1450 hypothetical protein VF
C6N23_RS27230 () 1589510..1589690 + 181 Protein_1451 hypothetical protein VF
C6N23_RS08110 () 1589931..1592612 + 2682 WP_199853016.1 DUF2726 domain-containing protein -
C6N23_RS08115 () 1593111..1594343 + 1233 WP_106914238.1 phosphoadenosine phosphosulfate reductase -
C6N23_RS08120 () 1594328..1594966 + 639 WP_047087012.1 ParB N-terminal domain-containing protein -
C6N23_RS08125 () 1595045..1595314 + 270 WP_000226517.1 PerC family transcriptional regulator -
C6N23_RS08130 () 1595335..1595979 + 645 WP_001378814.1 hypothetical protein -
C6N23_RS08135 () 1596091..1596450 + 360 Protein_1457 IS66 family transposase ISCro1 Transposase
C6N23_RS08140 () 1596477..1596686 - 210 WP_000323309.1 hypothetical protein -
C6N23_RS08145 () 1596720..1596911 - 192 WP_047081958.1 hypothetical protein -
C6N23_RS08150 () 1596921..1597286 - 366 WP_033811940.1 hypothetical protein -
C6N23_RS08160 () 1597420..1597629 + 210 WP_062896385.1 hypothetical protein -
C6N23_RS08165 () 1597792..1601874 - 4083 Protein_1462 hypothetical protein VF
C6N23_RS08175 () 1602774..1603511 - 738 WP_000634448.1 AraC family transcriptional regulator -
C6N23_RS08190 () 1604465..1604777 - 313 Protein_1464 IS66 family insertion sequence element accessory protein TnpB -
C6N23_RS08195 () 1604764..1604972 - 209 Protein_1465 IS66 family insertion sequence element accessory protein TnpB -
C6N23_RS08200 () 1605649..1606785 + 1137 WP_001228923.1 hypothetical protein VF
C6N23_RS08205 () 1606880..1608577 + 1698 WP_000401036.1 sulfatase -
C6N23_RS08210 () 1608646..1608903 + 258 WP_001032733.1 hypothetical protein -
C6N23_RS08220 () 1609420..1610582 + 1163 WP_097742555.1 IS3 family transposase IS3 Transposase
C6N23_RS08225 () 1610787..1612631 + 1845 WP_000593011.1 Vitamin B12 transporter BtuB VF
C6N23_RS08230 () 1612651..1612836 + 186 Protein_1471 IS256 family transposase ISEic2 Transposase
C6N23_RS08235 () 1612977..1615067 - 2091 WP_047086678.1 bifunctional siderophore receptor/adhesin Iha -
C6N23_RS08250 () 1616520..1616846 + 327 WP_106914239.1 hypothetical protein -
C6N23_RS27000 () 1617427..1617763 + 337 Protein_1474 hypothetical protein -
C6N23_RS08260 () 1618565..1618758 - 194 Protein_1475 hypothetical protein -
C6N23_RS27005 () 1618810..1618989 - 180 WP_071531291.1 hypothetical protein -
C6N23_RS08270 () 1619078..1619383 + 306 WP_001518278.1 hypothetical protein -
C6N23_RS08280 () 1620078..1620734 + 657 Protein_1478 IS66 family transposase ISEc23 Transposase
C6N23_RS08290 () 1621144..1622328 - 1185 WP_000786522.1 acetyl-CoA acetyltransferase -
C6N23_RS08295 () 1622359..1623681 - 1323 WP_000580275.1 TIGR00366 family protein -
C6N23_RS08300 () 1623678..1624328 - 651 WP_000339054.1 acetate CoA-transferase subunit beta -
C6N23_RS08305 () 1624328..1624990 - 663 WP_000850528.1 acetate CoA-transferase subunit alpha -
C6N23_RS08310 () 1625186..1626571 - 1386 WP_047086676.1 acetoacetate metabolism transcriptional regulator AtoC -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance