MGE detailed information
MGE type: Prophage MGE length: 56498 bp
Accession: NZ_CP027340 Location: 3448751..3505248 Organism: Escherichia coli strain 2015C-3121 Replicon: chromosome
Accession: NZ_CP027340 Location: 3448751..3505248 Organism: Escherichia coli strain 2015C-3121 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N25_RS18475 () | 3444497..3445318 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| C6N25_RS18480 () | 3445457..3446245 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| C6N25_RS18485 () | 3446242..3446703 | - | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| C6N25_RS18490 () | 3446761..3447807 | - | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| C6N25_RS18495 () | 3447804..3448598 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| C6N25_RS18500 () | 3448751..3449308 | - | 558 | WP_044721854.1 | ORF6N domain-containing protein | - |
| C6N25_RS30095 () | 3449445..3449588 | - | 144 | WP_157911216.1 | ash family protein | - |
| C6N25_RS18505 () | 3449585..3450703 | - | 1119 | WP_106888821.1 | hypothetical protein ; Integrase | Integrase |
| C6N25_RS18510 () | 3450672..3450941 | - | 270 | WP_000003742.1 | excisionase | - |
| C6N25_RS18515 () | 3451003..3453390 | - | 2388 | WP_106888822.1 | exonuclease | - |
| C6N25_RS18520 () | 3453431..3453754 | - | 324 | WP_044809962.1 | hypothetical protein | - |
| C6N25_RS18525 () | 3453870..3454094 | - | 225 | WP_044809961.1 | cell division protein FtsZ | - |
| C6N25_RS30435 () | 3454662..3454916 | + | 255 | WP_033801181.1 | hypothetical protein | - |
| C6N25_RS18540 () | 3454900..3455115 | - | 216 | WP_033801180.1 | hypothetical protein | - |
| C6N25_RS18545 () | 3455117..3455272 | - | 156 | WP_062873438.1 | DUF1391 family protein | - |
| C6N25_RS18550 () | 3455544..3455831 | - | 288 | WP_001444087.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6N25_RS18555 () | 3455835..3456023 | - | 189 | WP_001090455.1 | hypothetical protein | Antitoxin Detail |
| C6N25_RS18560 () | 3456053..3456451 | - | 399 | WP_000209117.1 | helix-turn-helix domain-containing protein | - |
| C6N25_RS18565 () | 3456568..3456846 | + | 279 | WP_047654503.1 | helix-turn-helix domain-containing protein | - |
| C6N25_RS18570 () | 3456830..3457351 | + | 522 | WP_106888823.1 | hypothetical protein | - |
| C6N25_RS18575 () | 3457332..3458297 | + | 966 | WP_000054520.1 | hypothetical protein | - |
| C6N25_RS18580 () | 3458304..3459044 | + | 741 | WP_106888824.1 | ATP-binding protein | - |
| C6N25_RS18585 () | 3459070..3459825 | + | 756 | WP_106888825.1 | DUF1627 domain-containing protein | - |
| C6N25_RS18590 () | 3459847..3460071 | + | 225 | WP_000702797.1 | hypothetical protein | - |
| C6N25_RS18595 () | 3460068..3460424 | + | 357 | WP_106888826.1 | eae-like protein | - |
| C6N25_RS18600 () | 3460434..3460610 | + | 177 | WP_106888827.1 | hypothetical protein | - |
| C6N25_RS18605 () | 3460607..3460918 | + | 312 | WP_001273106.1 | hypothetical protein | - |
| C6N25_RS18610 () | 3461045..3461608 | + | 564 | WP_106888828.1 | hypothetical protein | - |
| C6N25_RS18615 () | 3461718..3461822 | + | 105 | WP_001278460.1 | hypothetical protein | - |
| C6N25_RS18625 () | 3462067..3462222 | + | 156 | WP_000813256.1 | type I toxin-antitoxin system toxin HokD | - |
| C6N25_RS18630 () | 3462390..3462668 | + | 279 | WP_062883712.1 | hypothetical protein | - |
| C6N25_RS18635 () | 3462670..3463728 | + | 1059 | WP_106888829.1 | DUF968 domain-containing protein | - |
| C6N25_RS18640 () | 3463729..3464094 | + | 366 | WP_106888830.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6N25_RS18645 () | 3464103..3464663 | + | 561 | WP_000640044.1 | DUF1133 family protein | - |
| C6N25_RS30105 () | 3464880..3465077 | + | 198 | WP_000917768.1 | hypothetical protein | - |
| C6N25_RS18655 () | 3465228..3466286 | + | 1059 | WP_106888831.1 | site-specific DNA-methyltransferase | - |
| C6N25_RS18675 () | 3466670..3467629 | + | 960 | WP_106888832.1 | Shiga toxin subunit A | VF |
| C6N25_RS18680 () | 3467642..3467905 | + | 264 | WP_000719322.1 | Shiga toxin subunit B | VF |
| C6N25_RS18685 () | 3468428..3470383 | + | 1956 | WP_106888833.1 | SASA family carbohydrate esterase | - |
| C6N25_RS18690 () | 3470534..3470716 | + | 183 | WP_106888834.1 | DUF1378 family protein | - |
| C6N25_RS18695 () | 3470742..3471026 | + | 285 | WP_106888835.1 | DUF826 domain-containing protein | - |
| C6N25_RS18700 () | 3471103..3471318 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| C6N25_RS18705 () | 3471322..3471963 | + | 642 | WP_001015165.1 | hypothetical protein | - |
| C6N25_RS18710 () | 3471991..3472218 | + | 228 | WP_001371270.1 | DUF1327 domain-containing protein | - |
| C6N25_RS18715 () | 3472223..3472510 | - | 288 | WP_000406285.1 | hypothetical protein | - |
| C6N25_RS18720 () | 3472635..3473168 | + | 534 | WP_001092887.1 | lysozyme | - |
| C6N25_RS30440 () | 3473325..3473509 | + | 185 | Protein_3359 | hypothetical protein | - |
| C6N25_RS30110 () | 3473524..3473655 | + | 132 | WP_001280925.1 | hypothetical protein | - |
| C6N25_RS18735 () | 3473663..3474598 | + | 936 | WP_000650395.1 | site-specific DNA-methyltransferase | - |
| C6N25_RS30120 () | 3474815..3475000 | + | 186 | WP_071852370.1 | Rz1 family lipoprotein | - |
| C6N25_RS18745 () | 3475086..3475310 | + | 225 | WP_000735659.1 | hypothetical protein | - |
| C6N25_RS18760 () | 3475655..3475981 | + | 327 | WP_000828070.1 | TonB family protein | - |
| C6N25_RS18765 () | 3476113..3476313 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| C6N25_RS18770 () | 3476355..3476720 | + | 366 | WP_033883566.1 | HNH endonuclease | - |
| C6N25_RS18780 () | 3477010..3477573 | + | 564 | WP_000958372.1 | terminase small subunit | - |
| C6N25_RS18785 () | 3477570..3479231 | + | 1662 | WP_033883565.1 | terminase large subunit | - |
| C6N25_RS18790 () | 3479295..3481232 | + | 1938 | WP_000173022.1 | phage major capsid protein | - |
| C6N25_RS18795 () | 3481277..3481498 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C6N25_RS18800 () | 3481444..3484029 | + | 2586 | Protein_3371 | phage portal protein | - |
| C6N25_RS18805 () | 3484026..3484352 | + | 327 | WP_000126002.1 | head-tail connector protein | - |
| C6N25_RS18810 () | 3484362..3484712 | + | 351 | WP_001007900.1 | phage head closure protein | - |
| C6N25_RS18815 () | 3484709..3485155 | + | 447 | WP_000573400.1 | HK97 gp10 family phage protein | - |
| C6N25_RS18820 () | 3485152..3485496 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C6N25_RS18825 () | 3485563..3486279 | + | 717 | WP_033883560.1 | immunoglobulin domain-containing protein | - |
| C6N25_RS18830 () | 3486294..3486668 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| C6N25_RS18835 () | 3486764..3486973 | + | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| C6N25_RS18840 () | 3487021..3490263 | + | 3243 | WP_062891024.1 | phage tail tape measure protein | - |
| C6N25_RS18845 () | 3490256..3490597 | + | 342 | WP_000807934.1 | phage tail protein | - |
| C6N25_RS18850 () | 3490814..3491969 | + | 1156 | Protein_3381 | Outer membrane porin protein OmpD | VF |
| C6N25_RS18855 () | 3492166..3492864 | + | 699 | WP_021565053.1 | phage minor tail protein L | - |
| C6N25_RS18860 () | 3492875..3493618 | + | 744 | WP_106888836.1 | C40 family peptidase | - |
| C6N25_RS18865 () | 3493564..3494196 | + | 633 | WP_134793502.1 | tail assembly protein | - |
| C6N25_RS18880 () | 3494621..3498170 | + | 3550 | Protein_3385 | host specificity protein J | - |
| C6N25_RS18885 () | 3498372..3498512 | + | 141 | WP_000078854.1 | Hok/Gef family protein | - |
| C6N25_RS18890 () | 3498655..3500391 | + | 1737 | WP_106888837.1 | ISNCY family transposase KIS | Transposase |
| C6N25_RS18895 () | 3500455..3501126 | + | 672 | WP_096853638.1 | DUF4376 domain-containing protein | - |
| C6N25_RS18900 () | 3501290..3501619 | - | 330 | WP_106888838.1 | YkgJ family cysteine cluster protein | - |
| C6N25_RS18905 () | 3501786..3502649 | - | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| C6N25_RS18910 () | 3502633..3503769 | - | 1137 | WP_000531601.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| C6N25_RS18920 () | 3504019..3505248 | + | 1230 | WP_000359438.1 | peptidase T | - |
| C6N25_RS18925 () | 3505394..3506515 | - | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| C6N25_RS18930 () | 3506591..3508051 | - | 1461 | WP_106888839.1 | two-component system sensor histidine kinase PhoQ | - |
| C6N25_RS18935 () | 3508051..3508722 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|