MGE detailed information
MGE type: Prophage MGE length: 66299 bp
Accession: NZ_CP027340 Location: 3275461..3341759 Organism: Escherichia coli strain 2015C-3121 Replicon: chromosome
Accession: NZ_CP027340 Location: 3275461..3341759 Organism: Escherichia coli strain 2015C-3121 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N25_RS17420 () | 3271033..3271611 | + | 579 | Protein_3119 | hypothetical protein | - |
| C6N25_RS17430 () | 3271668..3272365 | + | 698 | Protein_3120 | IS1-like element IS1A family transposase | - |
| C6N25_RS17435 () | 3272377..3273065 | + | 689 | Protein_3121 | hypothetical protein | - |
| C6N25_RS17440 () | 3273359..3274600 | + | 1242 | WP_001044314.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| C6N25_RS17445 () | 3274638..3274865 | - | 228 | WP_001143120.1 | YccJ family protein | - |
| C6N25_RS17450 () | 3274886..3275464 | - | 579 | WP_000607019.1 | NAD(P)H:quinone oxidoreductase | - |
| C6N25_RS17455 () | 3275461..3276771 | - | 1311 | WP_001368133.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C6N25_RS17460 () | 3276824..3277108 | - | 285 | WP_001208773.1 | excisionase family protein | - |
| C6N25_RS17465 () | 3277154..3277405 | - | 252 | WP_000497816.1 | DUF4222 domain-containing protein | - |
| C6N25_RS17470 () | 3277393..3277626 | - | 234 | WP_021351637.1 | hypothetical protein | - |
| C6N25_RS17475 () | 3277770..3278159 | - | 390 | WP_044721833.1 | DUF1627 domain-containing protein | - |
| C6N25_RS17480 () | 3278195..3278407 | - | 213 | WP_001291843.1 | DUF1382 family protein | - |
| C6N25_RS17485 () | 3278367..3278993 | - | 627 | WP_000163448.1 | adenine methylase | - |
| C6N25_RS17490 () | 3278990..3279421 | - | 432 | WP_000809302.1 | hypothetical protein | - |
| C6N25_RS17495 () | 3279477..3280115 | - | 639 | WP_000203832.1 | phage antirepressor Ant | - |
| C6N25_RS17500 () | 3280471..3281038 | - | 568 | Protein_3134 | DUF551 domain-containing protein | - |
| C6N25_RS30080 () | 3281040..3281237 | - | 198 | Protein_3135 | ead/Ea22-like family protein | - |
| C6N25_RS17505 () | 3281331..3282559 | + | 1229 | WP_169073214.1 | IS3 family transposase IS2 | Transposase |
| C6N25_RS17510 () | 3282571..3283110 | - | 540 | Protein_3137 | ead/Ea22-like family protein | - |
| C6N25_RS17515 () | 3283107..3283346 | - | 240 | WP_000476200.1 | hypothetical protein | - |
| C6N25_RS17520 () | 3283339..3283542 | - | 204 | WP_000158004.1 | hypothetical protein | - |
| C6N25_RS17525 () | 3283539..3284417 | - | 879 | WP_024178254.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| C6N25_RS17530 () | 3284525..3284968 | - | 444 | WP_032344414.1 | hypothetical protein | - |
| C6N25_RS17535 () | 3285045..3285866 | - | 822 | WP_000080417.1 | DUF2303 family protein | - |
| C6N25_RS17540 () | 3285930..3286277 | - | 348 | WP_001071603.1 | hypothetical protein | - |
| C6N25_RS17545 () | 3286352..3286939 | - | 588 | WP_000344637.1 | hypothetical protein | - |
| C6N25_RS17550 () | 3286939..3287628 | - | 690 | WP_000187063.1 | YqaJ viral recombinase family protein | - |
| C6N25_RS17560 () | 3287792..3288489 | - | 698 | Protein_3146 | IS1 family transposase IS1A | Transposase |
| C6N25_RS17570 () | 3288546..3288629 | - | 84 | Protein_3147 | recombinase RecT | - |
| C6N25_RS17575 () | 3288647..3288928 | - | 282 | WP_000995348.1 | host nuclease inhibitor GamL | - |
| C6N25_RS17580 () | 3288949..3289230 | - | 282 | WP_000934192.1 | hypothetical protein | - |
| C6N25_RS17585 () | 3289242..3289454 | - | 213 | WP_000917251.1 | hypothetical protein | - |
| C6N25_RS17590 () | 3289525..3290307 | - | 783 | WP_158707279.1 | Rha family phage regulatory protein | - |
| C6N25_RS17595 () | 3291059..3291307 | + | 249 | WP_000513533.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C6N25_RS17600 () | 3291304..3291648 | + | 345 | WP_000681611.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C6N25_RS30430 () | 3291765..3291935 | - | 171 | WP_167580584.1 | hypothetical protein | - |
| C6N25_RS17605 () | 3291936..3292838 | - | 903 | WP_000081325.1 | serine dehydrogenasease | - |
| C6N25_RS17610 () | 3293018..3293179 | - | 162 | WP_071525586.1 | transmembrane anchored protein | - |
| C6N25_RS17615 () | 3293276..3293989 | - | 714 | WP_001056249.1 | LexA family transcriptional regulator | - |
| C6N25_RS17620 () | 3294085..3294288 | + | 204 | WP_001240876.1 | Cro/Cl family transcriptional regulator | - |
| C6N25_RS17625 () | 3294459..3294653 | + | 195 | WP_001302923.1 | hypothetical protein | - |
| C6N25_RS17630 () | 3294820..3295197 | + | 378 | WP_001271433.1 | hypothetical protein | - |
| C6N25_RS17635 () | 3295191..3296711 | + | 1521 | WP_000913118.1 | DEAD/DEAH box helicase | - |
| C6N25_RS17640 () | 3296701..3297672 | + | 972 | WP_001193568.1 | toprim domain-containing protein | - |
| C6N25_RS17645 () | 3297672..3298121 | + | 450 | WP_000402094.1 | DUF1367 family protein | - |
| C6N25_RS17650 () | 3298129..3298692 | + | 564 | WP_000813672.1 | recombination protein NinG | - |
| C6N25_RS17655 () | 3298689..3298883 | + | 195 | WP_000144767.1 | phage NinH family protein | - |
| C6N25_RS17660 () | 3298876..3299310 | + | 435 | WP_001204859.1 | antitermination protein | - |
| C6N25_RS17675 () | 3299817..3300764 | + | 948 | WP_001368310.1 | Shiga toxin subunit A | VF |
| C6N25_RS17680 () | 3300774..3301043 | + | 270 | WP_000752026.1 | Shiga toxin subunit B | VF |
| C6N25_RS17690 () | 3301549..3303488 | + | 1940 | Protein_3169 | DUF1737 domain-containing protein | - |
| C6N25_RS17695 () | 3303624..3303803 | + | 180 | WP_000143459.1 | DUF1378 family protein | - |
| C6N25_RS17700 () | 3303844..3304089 | + | 246 | WP_001368314.1 | DUF826 domain-containing protein | - |
| C6N25_RS17705 () | 3304167..3304382 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| C6N25_RS17710 () | 3304387..3304920 | + | 534 | WP_000087455.1 | lysozyme | - |
| C6N25_RS17715 () | 3305195..3305767 | + | 573 | WP_001056878.1 | hypothetical protein | - |
| C6N25_RS30085 () | 3305767..3305913 | + | 147 | Protein_3175 | hypothetical protein | - |
| C6N25_RS17720 () | 3305923..3306360 | + | 438 | WP_001368309.1 | lysis protein | - |
| C6N25_RS17725 () | 3306559..3307056 | + | 498 | WP_000644480.1 | KilA-N domain-containing protein | - |
| C6N25_RS17730 () | 3307053..3307310 | + | 258 | WP_001283921.1 | hypothetical protein | - |
| C6N25_RS17735 () | 3307536..3307910 | + | 375 | WP_000999684.1 | hypothetical protein | - |
| C6N25_RS17740 () | 3308319..3309125 | + | 807 | WP_001086071.1 | terminase | - |
| C6N25_RS17745 () | 3309106..3310812 | + | 1707 | WP_000143996.1 | hypothetical protein | - |
| C6N25_RS17750 () | 3310812..3312956 | + | 2145 | WP_000787037.1 | hypothetical protein | - |
| C6N25_RS17755 () | 3313114..3314121 | + | 1008 | WP_000345012.1 | hypothetical protein | - |
| C6N25_RS17760 () | 3314145..3315359 | + | 1215 | WP_000214474.1 | N4-gp56 family major capsid protein | - |
| C6N25_RS17765 () | 3315415..3315804 | + | 390 | WP_001140444.1 | hypothetical protein | - |
| C6N25_RS17770 () | 3315854..3316315 | + | 462 | WP_001367376.1 | hypothetical protein | - |
| C6N25_RS17775 () | 3316299..3316848 | + | 550 | Protein_3187 | hypothetical protein | - |
| C6N25_RS17780 () | 3316848..3317498 | + | 651 | WP_000207913.1 | hypothetical protein | - |
| C6N25_RS17785 () | 3317495..3319576 | + | 2082 | WP_106888817.1 | ISNCY family transposase KIS | Transposase |
| C6N25_RS17790 () | 3319586..3319810 | + | 225 | WP_001367204.1 | hypothetical protein | - |
| C6N25_RS17795 () | 3319807..3320481 | + | 675 | WP_106888818.1 | DUF4376 domain-containing protein | - |
| C6N25_RS17800 () | 3321019..3322644 | + | 1626 | WP_024199968.1 | hypothetical protein | - |
| C6N25_RS17805 () | 3322641..3323909 | + | 1269 | WP_000197192.1 | host specificity protein J | - |
| C6N25_RS17810 () | 3323924..3324202 | + | 279 | WP_000455635.1 | hypothetical protein | - |
| C6N25_RS17815 () | 3324208..3324825 | + | 618 | WP_001301884.1 | hypothetical protein | - |
| C6N25_RS17820 () | 3324916..3325650 | + | 735 | WP_000835363.1 | Attachment invasion locus protein | VF |
| C6N25_RS17830 () | 3325882..3326022 | + | 141 | WP_000078907.1 | Hok/Gef family protein | - |
| C6N25_RS17835 () | 3326374..3327585 | + | 1212 | WP_000710194.1 | YadA-like family protein | - |
| C6N25_RS17840 () | 3327721..3328074 | + | 354 | WP_001380385.1 | hypothetical protein | - |
| C6N25_RS17845 () | 3328169..3328825 | + | 657 | WP_000509485.1 | hypothetical protein | - |
| C6N25_RS17850 () | 3328828..3329274 | + | 447 | WP_000455656.1 | hypothetical protein | - |
| C6N25_RS17855 () | 3329284..3329556 | + | 273 | WP_000540399.1 | hypothetical protein | - |
| C6N25_RS17860 () | 3329567..3330832 | + | 1266 | WP_000012443.1 | hypothetical protein | - |
| C6N25_RS17865 () | 3330902..3339244 | + | 8343 | WP_106888819.1 | hypothetical protein | - |
| C6N25_RS30090 () | 3339309..3339406 | - | 98 | Protein_3205 | Hok/Gef family protein | - |
| C6N25_RS17880 () | 3340175..3340348 | + | 174 | WP_001273658.1 | general stress protein | - |
| C6N25_RS17885 () | 3340431..3341759 | - | 1329 | WP_001240631.1 | pyrimidine utilization transport protein G | - |
| C6N25_RS17890 () | 3341780..3342274 | - | 495 | WP_001028095.1 | pyrimidine utilization flavin reductase protein F | - |
| C6N25_RS17895 () | 3342285..3342875 | - | 591 | WP_001001171.1 | malonic semialdehyde reductase | - |
| C6N25_RS17900 () | 3342885..3343685 | - | 801 | WP_001345413.1 | pyrimidine utilization protein D | - |
| C6N25_RS17905 () | 3343693..3344079 | - | 387 | WP_001126777.1 | pyrimidine utilization protein C | - |
| C6N25_RS17910 () | 3344091..3344783 | - | 693 | WP_001307708.1 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
| C6N25_RS17915 () | 3344783..3345874 | - | 1092 | WP_001367989.1 | pyrimidine utilization protein A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|