MGE detailed information
MGE type: Mobilizable plasmid MGE length: 92644 bp
Accession: NZ_CP027339 Location: 1..92644 Organism: Escherichia coli strain 2014C-3051 Replicon: plasmid unnamed
Accession: NZ_CP027339 Location: 1..92644 Organism: Escherichia coli strain 2014C-3051 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N28_RS30230 () | 7976..8206 | - | 231 | WP_001443774.1 | transposase | - |
| C6N28_RS30235 () | 8213..8621 | + | 409 | Protein_2 | IS3 family transposase | - |
| C6N28_RS30240 () | 8688..10187 | - | 1500 | Protein_3 | IS66 family transposase | - |
| C6N28_RS30245 () | 10199..11350 | - | 1152 | Protein_4 | IS3 family transposase | - |
| C6N28_RS30250 () | 11421..11807 | - | 387 | Protein_5 | IS66 family transposase ISEc23 | Transposase |
| C6N28_RS30255 () | 11894..12008 | + | 115 | Protein_6 | IS3 family transposase | - |
| C6N28_RS30260 () | 12059..13568 | - | 1510 | Protein_7 | ISL3 family transposase | - |
| C6N28_RS30265 () | 14188..15195 | - | 1008 | Protein_8 | IS91 family transposase ISEc37 | Transposase |
| C6N28_RS30275 () | 15786..16973 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| C6N28_RS30280 () | 16973..17338 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| C6N28_RS30290 () | 17744..18127 | - | 384 | Protein_11 | IS91 family transposase ISMno23 | Transposase |
| C6N28_RS30295 () | 18161..19713 | - | 1553 | Protein_12 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30300 () | 19733..20080 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30305 () | 20077..20751 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30310 () | 20805..21032 | - | 228 | WP_001341442.1 | transposase | - |
| C6N28_RS30315 () | 21195..22172 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| C6N28_RS30320 () | 22978..24190 | + | 1213 | Protein_17 | IS3 family transposase IS629 | Transposase |
| C6N28_RS30335 () | 24363..26572 | + | 2210 | Protein_18 | Catalase-peroxidase | VF |
| C6N28_RS30340 () | 26708..27004 | + | 297 | WP_071527595.1 | cytochrome B562 | - |
| C6N28_RS30345 () | 27118..27305 | + | 188 | Protein_20 | IS3 family transposase IS629 | Transposase |
| C6N28_RS30350 () | 27371..28527 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| C6N28_RS30355 () | 28573..29152 | + | 580 | Protein_22 | IS3 family transposase | - |
| C6N28_RS30360 () | 29232..29627 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| C6N28_RS30365 () | 29627..30586 | - | 960 | WP_000921957.1 | plasmid segregation protein ParM | - |
| C6N28_RS30370 () | 30859..31761 | + | 903 | WP_077249722.1 | DUF1281 domain-containing protein | - |
| C6N28_RS30375 () | 31758..32069 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| C6N28_RS30380 () | 32145..32828 | + | 684 | WP_032324142.1 | DNA methylase | - |
| C6N28_RS30385 () | 32828..33046 | + | 219 | WP_001443814.1 | hypothetical protein | - |
| C6N28_RS30390 () | 33058..33492 | + | 435 | WP_000274418.1 | DUF1380 family protein | - |
| C6N28_RS31400 () | 33537..33776 | + | 240 | Protein_30 | hypothetical protein | - |
| C6N28_RS31405 () | 33771..34019 | + | 249 | Protein_31 | conjugation system SOS inhibitor PsiB | - |
| C6N28_RS30400 () | 34016..34735 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C6N28_RS31410 () | 34732..35329 | + | 598 | Protein_33 | hypothetical protein | - |
| C6N28_RS30415 () | 35791..36291 | + | 501 | WP_000117628.1 | antirestriction protein ArdA | - |
| C6N28_RS30425 () | 36807..37021 | + | 215 | Protein_35 | hypothetical protein | - |
| C6N28_RS30435 () | 37275..37451 | + | 177 | WP_001677351.1 | hypothetical protein | - |
| C6N28_RS30440 () | 37544..37810 | + | 267 | WP_001247865.1 | hypothetical protein | - |
| C6N28_RS30445 () | 37875..38765 | + | 891 | WP_000038351.1 | Recombination-promoting nuclease RpnA | VF |
| C6N28_RS30450 () | 38765..39010 | + | 246 | WP_012605149.1 | hypothetical protein | - |
| C6N28_RS30455 () | 39041..39292 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| C6N28_RS30460 () | 39351..39677 | - | 327 | WP_199852433.1 | hypothetical protein | - |
| C6N28_RS30465 () | 39868..40716 | + | 849 | WP_001341408.1 | DUF4942 domain-containing protein | - |
| C6N28_RS30470 () | 40813..41136 | - | 324 | WP_106889343.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| C6N28_RS30475 () | 41368..41700 | + | 333 | WP_001291056.1 | hypothetical protein | - |
| C6N28_RS30480 () | 41712..44432 | + | 2721 | WP_000991402.1 | Protein TraI | Relaxase |
| C6N28_RS30490 () | 45010..45698 | + | 689 | Protein_46 | IS3 family transposase IS600 | Transposase |
| C6N28_RS30500 () | 46951..47364 | + | 414 | WP_136138333.1 | DUF1449 family protein | - |
| C6N28_RS30505 () | 47411..47623 | - | 213 | Protein_49 | IS3 family transposase ISSfl10 | Transposase |
| C6N28_RS31170 () | 47662..47919 | + | 258 | WP_000112000.1 | hypothetical protein | - |
| C6N28_RS30515 () | 48167..52069 | - | 3903 | WP_106889344.1 | Serine protease EspP | VF |
| C6N28_RS30520 () | 52512..52685 | - | 174 | Protein_52 | IS66 family transposase | - |
| C6N28_RS30525 () | 52747..52959 | + | 213 | Protein_53 | IS3 family transposase ISSfl10 | Transposase |
| C6N28_RS31175 () | 53007..53426 | - | 420 | WP_136139077.1 | DUF1449 family protein | - |
| C6N28_RS30540 () | 53357..54031 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30545 () | 54028..54375 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30550 () | 54395..55947 | + | 1553 | Protein_57 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30555 () | 56226..57413 | - | 1188 | WP_000937603.1 | IS91 family transposase ISEc37 | Transposase |
| C6N28_RS30560 () | 57364..57777 | - | 414 | WP_001344870.1 | hypothetical protein | - |
| C6N28_RS30570 () | 58014..58361 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C6N28_RS30575 () | 58411..59949 | + | 1539 | WP_012917688.1 | IS66 family transposase ISEc8 | Transposase |
| C6N28_RS30580 () | 60012..60200 | - | 189 | Protein_62 | hypothetical protein | - |
| C6N28_RS30585 () | 60253..61252 | - | 1000 | Protein_63 | Lipid A biosynthesis myristoyltransferase | VF |
| C6N28_RS30590 () | 61326..63047 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C6N28_RS30595 () | 63141..64247 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C6N28_RS30600 () | 64247..65068 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C6N28_RS30610 () | 66541..67192 | + | 652 | Protein_67 | IS3 family transposase IS629 | Transposase |
| C6N28_RS30620 () | 67715..68229 | + | 515 | Protein_68 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C6N28_RS30625 () | 68231..71226 | + | 2996 | Protein_69 | Hemolysin, chromosomal | VF |
| C6N28_RS30630 () | 71276..73396 | + | 2121 | WP_000987096.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6N28_RS30635 () | 73400..74839 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6N28_RS30640 () | 74906..75049 | + | 144 | Protein_72 | transcriptional regulator | - |
| C6N28_RS30645 () | 75053..75244 | + | 192 | Protein_73 | lipid II-degrading bacteriocin | - |
| C6N28_RS30655 () | 76525..76872 | - | 348 | WP_106889347.1 | colicin M immunity protein | - |
| C6N28_RS30660 () | 77045..77827 | - | 783 | WP_001164205.1 | site-specific integrase | - |
| C6N28_RS30665 () | 77829..78241 | - | 413 | Protein_77 | hypothetical protein | - |
| C6N28_RS30680 () | 78803..79033 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| C6N28_RS30685 () | 79030..79446 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| C6N28_RS30690 () | 79608..80153 | - | 546 | WP_001165114.1 | hypothetical protein | - |
| C6N28_RS30695 () | 80221..81377 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| C6N28_RS31180 () | 81418..81693 | - | 276 | WP_157776129.1 | hypothetical protein | - |
| C6N28_RS30700 () | 82182..83042 | - | 861 | WP_000704534.1 | putative protein YcjY | VF |
| C6N28_RS30705 () | 83170..83556 | + | 387 | WP_001066949.1 | tyrosine-type recombinase/integrase | - |
| C6N28_RS30710 () | 83610..84284 | + | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30715 () | 84281..84628 | + | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30720 () | 84648..86200 | + | 1553 | Protein_87 | IS66 family transposase ISSfl3 | Transposase |
| C6N28_RS30725 () | 86234..86593 | - | 360 | Protein_88 | DUF1449 family protein | - |
| C6N28_RS30735 () | 86860..87525 | - | 666 | WP_000154135.1 | hypothetical protein | - |
| C6N28_RS30740 () | 87666..88307 | - | 642 | WP_000335839.1 | transcription termination factor NusG | - |
| C6N28_RS30755 () | 89016..90047 | + | 1032 | WP_000907857.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|