MGE detailed information
MGE type: Prophage MGE length: 43579 bp
Accession: NZ_CP027325 Location: 656478..700056 Organism: Escherichia coli strain 2013C-4830 Replicon: chromosome
Accession: NZ_CP027325 Location: 656478..700056 Organism: Escherichia coli strain 2013C-4830 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N65_RS03420 () | 652329..653744 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| C6N65_RS03425 () | 653827..654810 | + | 984 | WP_000235516.1 | quinone oxidoreductase | - |
| C6N65_RS03430 () | 654976..655218 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| C6N65_RS03435 () | 655352..656389 | - | 1038 | WP_000543841.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| C6N65_RS03440 () | 656478..657575 | + | 1098 | WP_000332258.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6N65_RS03445 () | 657637..657885 | + | 249 | WP_047618033.1 | DinI-like family protein | - |
| C6N65_RS03455 () | 658046..658687 | - | 642 | WP_001143783.1 | hypothetical protein | VF |
| C6N65_RS03460 () | 658769..659398 | - | 630 | WP_072140863.1 | hypothetical protein | VF |
| C6N65_RS03465 () | 659466..660047 | - | 582 | WP_001118085.1 | hypothetical protein | VF |
| C6N65_RS03470 () | 660088..660156 | - | 69 | Protein_624 | tail assembly protein | - |
| C6N65_RS03475 () | 660158..660427 | - | 270 | WP_047619066.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6N65_RS03480 () | 660429..661742 | - | 1314 | WP_060552894.1 | ISNCY family transposase KIS | Transposase |
| C6N65_RS03485 () | 661807..662406 | - | 600 | WP_060552836.1 | Outer membrane protein X | VF |
| C6N65_RS03490 () | 662473..665952 | - | 3480 | WP_060552895.1 | host specificity protein J | - |
| C6N65_RS03495 () | 666198..666830 | - | 633 | WP_122993104.1 | tail assembly protein | - |
| C6N65_RS03500 () | 666776..667519 | - | 744 | WP_060552896.1 | C40 family peptidase | - |
| C6N65_RS03505 () | 667525..668223 | - | 699 | WP_001357740.1 | phage minor tail protein L | - |
| C6N65_RS03510 () | 668223..668564 | - | 342 | WP_000807944.1 | phage tail protein | - |
| C6N65_RS03515 () | 668557..671799 | - | 3243 | WP_060552897.1 | phage tail tape measure protein | - |
| C6N65_RS03520 () | 671847..672056 | - | 210 | WP_122993099.1 | DUF4035 domain-containing protein | - |
| C6N65_RS03525 () | 672152..672526 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C6N65_RS03530 () | 672532..673248 | - | 717 | WP_001275477.1 | tail protein | - |
| C6N65_RS03535 () | 673315..673659 | - | 345 | WP_000133391.1 | DUF3168 domain-containing protein | - |
| C6N65_RS03540 () | 673656..674102 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C6N65_RS03545 () | 674099..674449 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| C6N65_RS03550 () | 674459..674785 | - | 327 | WP_047619202.1 | head-tail connector protein | - |
| C6N65_RS03555 () | 674782..676880 | - | 2099 | Protein_641 | phage portal protein | - |
| C6N65_RS03560 () | 676826..677047 | - | 222 | WP_032274028.1 | hypothetical protein | - |
| C6N65_RS03565 () | 677092..679029 | - | 1938 | WP_047619207.1 | phage major capsid protein | - |
| C6N65_RS03570 () | 679093..680754 | - | 1662 | WP_060552898.1 | terminase large subunit | - |
| C6N65_RS03575 () | 680751..681314 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| C6N65_RS03585 () | 681600..681965 | - | 366 | WP_024224188.1 | HNH endonuclease | - |
| C6N65_RS03590 () | 682007..682207 | + | 201 | WP_000095741.1 | YlcI/YnfO family protein | - |
| C6N65_RS03600 () | 682500..682757 | - | 258 | WP_001283921.1 | hypothetical protein | - |
| C6N65_RS03605 () | 682754..683251 | - | 498 | WP_000839224.1 | KilA-N domain-containing protein | - |
| C6N65_RS03610 () | 683454..683891 | - | 438 | Protein_650 | lysis system i-spanin subunit Rz | - |
| C6N65_RS03615 () | 683888..684385 | - | 498 | WP_001135289.1 | lysozyme RrrD | - |
| C6N65_RS03620 () | 684385..684600 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| C6N65_RS03630 () | 684884..686734 | - | 1851 | WP_060552899.1 | SASA family carbohydrate esterase | - |
| C6N65_RS03635 () | 687056..687308 | - | 253 | Protein_654 | DUF3927 family protein | - |
| C6N65_RS03640 () | 687305..687736 | - | 432 | WP_060552900.1 | tellurite resistance TerB family protein | - |
| C6N65_RS03645 () | 687904..688134 | - | 231 | WP_106918768.1 | hypothetical protein | - |
| C6N65_RS03650 () | 688187..688411 | - | 225 | WP_047619199.1 | hypothetical protein | - |
| C6N65_RS03670 () | 688825..689313 | - | 489 | WP_047619201.1 | antiterminator | - |
| C6N65_RS03675 () | 689304..689975 | - | 672 | Protein_659 | serine/threonine protein phosphatase | - |
| C6N65_RS03680 () | 690032..691245 | + | 1214 | WP_167588588.1 | IS3 family transposase IS629 | Transposase |
| C6N65_RS03685 () | 691289..692025 | - | 737 | Protein_661 | IS3 family transposase IS600 | Transposase |
| C6N65_RS03690 () | 692146..692334 | + | 189 | WP_001014286.1 | hypothetical protein | - |
| C6N65_RS03695 () | 692337..693005 | + | 669 | WP_047087994.1 | DUF550 domain-containing protein | - |
| C6N65_RS03700 () | 693005..693577 | + | 573 | WP_001061348.1 | 3'-5' exoribonuclease | - |
| C6N65_RS03705 () | 693614..693895 | + | 282 | WP_001093921.1 | pyocin activator PrtN family protein | - |
| C6N65_RS28795 () | 693943..694116 | - | 174 | WP_000390069.1 | hypothetical protein | - |
| C6N65_RS03710 () | 694156..694542 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| C6N65_RS03715 () | 694572..695144 | - | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| C6N65_RS03720 () | 695368..695502 | - | 135 | WP_071887528.1 | tRNA-dihydrouridine synthase | - |
| C6N65_RS03725 () | 695865..696850 | - | 986 | Protein_670 | DUF2713 domain-containing protein | - |
| C6N65_RS03735 () | 697168..697683 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| C6N65_RS03740 () | 697725..697934 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| C6N65_RS03745 () | 698050..699375 | - | 1326 | WP_032206041.1 | MATE family efflux transporter DinF | - |
| C6N65_RS03750 () | 699448..700056 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| C6N65_RS03755 () | 700166..700534 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| C6N65_RS03760 () | 700705..703128 | + | 2424 | WP_032206042.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| C6N65_RS03765 () | 703283..704155 | - | 873 | WP_032206043.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| C6N65_RS03770 () | 704168..704665 | - | 498 | WP_001297295.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|