MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 45545 bp
Accession: NZ_CP027325 Location: 2960762..3006306 Organism: Escherichia coli strain 2013C-4830 Replicon: chromosome
Accession: NZ_CP027325 Location: 2960762..3006306 Organism: Escherichia coli strain 2013C-4830 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N65_RS15410 () | 2956253..2956915 | - | 663 | WP_000847791.1 | DUF2057 family protein | - |
| C6N65_RS15415 () | 2957088..2957501 | + | 414 | WP_001343235.1 | CoA-binding protein | - |
| C6N65_RS15420 () | 2957546..2957863 | - | 318 | WP_001295356.1 | heat shock protein HspQ | - |
| C6N65_RS15425 () | 2957921..2959111 | - | 1191 | WP_106918785.1 | 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI | - |
| C6N65_RS15430 () | 2959206..2959484 | + | 279 | WP_000048252.1 | acylphosphatase | - |
| C6N65_RS15435 () | 2959481..2959810 | - | 330 | WP_000904442.1 | sulfurtransferase TusE | - |
| C6N65_RS15440 () | 2959901..2960560 | - | 660 | WP_000375138.1 | FtsH protease modulator YccA | - |
| C6N65_RS15445 () | 2960968..2961777 | - | 810 | WP_032206255.1 | hypothetical protein ; Integrase | Integrase |
| C6N65_RS15450 () | 2961965..2962207 | - | 243 | WP_000273151.1 | DUF4224 domain-containing protein | - |
| C6N65_RS15455 () | 2962275..2964749 | - | 2475 | WP_032206202.1 | exonuclease | - |
| C6N65_RS15460 () | 2964843..2965034 | - | 192 | WP_001098307.1 | DUF1482 family protein | - |
| C6N65_RS15465 () | 2965031..2965219 | - | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| C6N65_RS15475 () | 2965932..2966378 | + | 447 | WP_000373334.1 | hypothetical protein | - |
| C6N65_RS15480 () | 2966477..2966629 | - | 153 | WP_000367377.1 | DUF1391 family protein | - |
| C6N65_RS15485 () | 2966904..2967194 | - | 291 | WP_021568727.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6N65_RS15490 () | 2967194..2967385 | - | 192 | WP_000108762.1 | hypothetical protein | Antitoxin Detail |
| C6N65_RS15495 () | 2967403..2967903 | - | 501 | WP_021568728.1 | helix-turn-helix transcriptional regulator | - |
| C6N65_RS15500 () | 2968011..2968274 | + | 264 | WP_001048459.1 | helix-turn-helix domain-containing protein | - |
| C6N65_RS15505 () | 2968271..2968696 | + | 426 | WP_000693918.1 | Rha family transcriptional regulator | - |
| C6N65_RS15510 () | 2968768..2969838 | + | 1071 | WP_001262367.1 | hypothetical protein | - |
| C6N65_RS15515 () | 2969879..2970304 | + | 426 | WP_047087727.1 | DUF977 family protein | - |
| C6N65_RS15520 () | 2970358..2970717 | + | 360 | WP_032206196.1 | hypothetical protein | - |
| C6N65_RS15525 () | 2970763..2970975 | + | 213 | WP_032206194.1 | hypothetical protein | - |
| C6N65_RS15530 () | 2971011..2971844 | + | 834 | WP_032206192.1 | hypothetical protein | - |
| C6N65_RS15535 () | 2971954..2972058 | + | 105 | WP_001278459.1 | hypothetical protein | - |
| C6N65_RS15545 () | 2972303..2972458 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6N65_RS15550 () | 2972703..2973062 | + | 360 | WP_001219082.1 | helix-turn-helix domain-containing protein | - |
| C6N65_RS15555 () | 2973065..2973541 | + | 477 | WP_000284536.1 | ImmA/IrrE family metallo-endopeptidase | - |
| C6N65_RS15565 () | 2973974..2974252 | + | 279 | WP_032207160.1 | hypothetical protein | - |
| C6N65_RS15570 () | 2974254..2975312 | + | 1059 | WP_032207158.1 | DUF968 domain-containing protein | - |
| C6N65_RS15575 () | 2975313..2975693 | + | 381 | WP_032207155.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6N65_RS15580 () | 2975690..2976511 | + | 822 | WP_000762928.1 | antitermination protein | - |
| C6N65_RS15585 () | 2976749..2977111 | + | 363 | Protein_2818 | tellurite resistance TerB family protein | - |
| C6N65_RS15590 () | 2977108..2977239 | + | 132 | WP_001344632.1 | DUF3927 family protein | - |
| C6N65_RS15595 () | 2977682..2979532 | + | 1851 | WP_053888468.1 | SASA family carbohydrate esterase | - |
| C6N65_RS15605 () | 2979969..2980184 | + | 216 | WP_053897820.1 | class II holin family protein | - |
| C6N65_RS15615 () | 2980440..2980712 | - | 273 | WP_000138558.1 | hypothetical protein | - |
| C6N65_RS15625 () | 2980872..2981405 | + | 534 | WP_001003118.1 | lysozyme | - |
| C6N65_RS15630 () | 2981626..2981739 | + | 114 | WP_000675931.1 | hypothetical protein | - |
| C6N65_RS28585 () | 2981961..2982146 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6N65_RS15645 () | 2982674..2982988 | + | 315 | WP_001303878.1 | PerC family transcriptional regulator | - |
| C6N65_RS15650 () | 2983070..2983294 | - | 225 | WP_001300236.1 | YlcI/YnfO family protein | - |
| C6N65_RS15660 () | 2983697..2984206 | + | 510 | WP_000235436.1 | terminase small subunit | - |
| C6N65_RS15665 () | 2984178..2986106 | + | 1929 | WP_032207005.1 | phage terminase large subunit family protein | - |
| C6N65_RS15670 () | 2986090..2986296 | + | 207 | WP_000258991.1 | gpW family protein | - |
| C6N65_RS15675 () | 2986293..2987885 | + | 1593 | WP_001430223.1 | phage portal protein | - |
| C6N65_RS15680 () | 2987875..2989380 | + | 1506 | WP_001254039.1 | S49 family peptidase | - |
| C6N65_RS15685 () | 2989417..2989764 | + | 348 | WP_000256818.1 | head decoration protein | - |
| C6N65_RS15690 () | 2989822..2990850 | + | 1029 | WP_000522630.1 | major capsid protein | - |
| C6N65_RS15695 () | 2990902..2991276 | + | 375 | WP_000201528.1 | hypothetical protein | - |
| C6N65_RS15700 () | 2991269..2991622 | + | 354 | WP_001204544.1 | tail attachment protein | - |
| C6N65_RS15705 () | 2991637..2992212 | + | 576 | WP_032207006.1 | phage tail protein | - |
| C6N65_RS15710 () | 2992209..2992604 | + | 396 | WP_032207007.1 | phage minor tail U family protein | - |
| C6N65_RS15715 () | 2992612..2993352 | + | 741 | WP_001342267.1 | phage tail protein | - |
| C6N65_RS15720 () | 2993368..2993790 | + | 423 | WP_000479169.1 | phage minor tail protein G | - |
| C6N65_RS15725 () | 2993772..2994206 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| C6N65_RS15730 () | 2994199..2996760 | + | 2562 | Protein_2842 | phage tail tape measure protein | - |
| C6N65_RS15735 () | 2996757..2997086 | + | 330 | WP_000847347.1 | phage tail protein | - |
| C6N65_RS15740 () | 2997086..2997784 | + | 699 | WP_032207009.1 | phage minor tail protein L | - |
| C6N65_RS15745 () | 2997790..2998533 | + | 744 | WP_032207010.1 | C40 family peptidase | - |
| C6N65_RS15750 () | 2998470..2999102 | + | 633 | WP_071887464.1 | tail assembly protein | - |
| C6N65_RS15755 () | 2999163..3002558 | + | 3396 | WP_032207011.1 | host specificity protein J | - |
| C6N65_RS15760 () | 3002626..3003225 | + | 600 | WP_047617645.1 | Outer membrane protein X | VF |
| C6N65_RS15765 () | 3003290..3004495 | + | 1206 | WP_060552821.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6N65_RS15770 () | 3004497..3004766 | + | 270 | WP_001023379.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6N65_RS15775 () | 3004892..3005644 | - | 753 | WP_047618562.1 | Secreted effector protein EspF(U) | VF |
| C6N65_RS15790 () | 3006761..3007879 | + | 1119 | WP_001058323.1 | hydrogenase 1 small subunit | - |
| C6N65_RS15795 () | 3007876..3009669 | + | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
| C6N65_RS15800 () | 3009688..3010395 | + | 708 | WP_001186424.1 | Ni/Fe-hydrogenase b-type cytochrome subunit | - |
| C6N65_RS15805 () | 3010392..3010979 | + | 588 | WP_000003671.1 | hydrogenase 1 maturation protease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|