MGE detailed information
MGE type: Prophage MGE length: 37356 bp
Accession: NZ_CP027325 Location: 1697397..1734752 Organism: Escherichia coli strain 2013C-4830 Replicon: chromosome
Accession: NZ_CP027325 Location: 1697397..1734752 Organism: Escherichia coli strain 2013C-4830 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N65_RS08740 () | 1692452..1692895 | - | 444 | WP_000786399.1 | DNA polymerase III subunit chi | - |
| C6N65_RS08745 () | 1693142..1694653 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| C6N65_RS29060 () | 1694807..1694857 | + | 51 | WP_211180521.1 | protein YtgA | - |
| C6N65_RS08750 () | 1694920..1696020 | + | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| C6N65_RS08755 () | 1696020..1697102 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| C6N65_RS08760 () | 1697221..1698722 | - | 1502 | Protein_1580 | DUF853 domain-containing protein | - |
| C6N65_RS08765 () | 1698800..1699798 | - | 999 | WP_001309159.1 | DNA-binding transcriptional regulator IdnR | - |
| C6N65_RS08770 () | 1699863..1701182 | - | 1320 | WP_032208260.1 | gnt-II system L-idonate transporter | - |
| C6N65_RS08775 () | 1701247..1701549 | - | 303 | Protein_1583 | 5-keto-D-gluconate 5-reductase | VF |
| C6N65_RS08785 () | 1702858..1703325 | - | 468 | Protein_1585 | 5-keto-D-gluconate 5-reductase | VF |
| C6N65_RS08790 () | 1703349..1704380 | - | 1032 | WP_001197416.1 | L-idonate 5-dehydrogenase | - |
| C6N65_RS08795 () | 1704597..1705160 | + | 564 | WP_000896738.1 | gluconokinase | - |
| C6N65_RS08800 () | 1705164..1706183 | - | 1020 | WP_032208422.1 | NADPH-dependent aldehyde reductase Ahr | - |
| C6N65_RS08810 () | 1706662..1707924 | + | 1263 | WP_032208424.1 | Prophage integrase IntA ; Integrase | Integrase |
| C6N65_RS08815 () | 1707973..1708275 | + | 303 | WP_001616541.1 | hypothetical protein | - |
| C6N65_RS08820 () | 1708515..1710203 | + | 1689 | WP_001616542.1 | AAA family ATPase | - |
| C6N65_RS08825 () | 1710203..1711426 | + | 1224 | WP_047617601.1 | hypothetical protein | - |
| C6N65_RS08830 () | 1711428..1712612 | - | 1185 | WP_001616546.1 | site-specific DNA-methyltransferase | - |
| C6N65_RS08835 () | 1713119..1713520 | + | 402 | Protein_1594 | IS66 family transposase ISEc47 | Transposase |
| C6N65_RS08845 () | 1713832..1714454 | - | 623 | Protein_1595 | DNA-binding protein | - |
| C6N65_RS08850 () | 1714547..1714843 | - | 297 | WP_129014750.1 | hypothetical protein | - |
| C6N65_RS28475 () | 1714904..1715083 | - | 180 | WP_074433496.1 | hypothetical protein | - |
| C6N65_RS08860 () | 1716496..1716933 | - | 438 | Protein_1599 | hypothetical protein | - |
| C6N65_RS08865 () | 1717029..1717235 | - | 207 | WP_001616555.1 | AlpA family transcriptional regulator | - |
| C6N65_RS08870 () | 1717877..1718653 | + | 777 | WP_032208444.1 | hypothetical protein | - |
| C6N65_RS08875 () | 1718754..1719629 | + | 876 | WP_032208427.1 | GTPase family protein | - |
| C6N65_RS08885 () | 1719887..1720600 | + | 714 | WP_032208428.1 | transcriptional regulator | - |
| C6N65_RS08890 () | 1720597..1721232 | + | 636 | WP_001616559.1 | hypothetical protein | - |
| C6N65_RS08895 () | 1721271..1721726 | + | 456 | WP_032208430.1 | hypothetical protein | - |
| C6N65_RS08900 () | 1721723..1722172 | + | 450 | WP_032208432.1 | hypothetical protein | - |
| C6N65_RS08905 () | 1722242..1722472 | + | 231 | WP_024188497.1 | DUF905 domain-containing protein | - |
| C6N65_RS08910 () | 1722570..1723391 | + | 822 | WP_032208434.1 | DUF945 domain-containing protein | - |
| C6N65_RS08915 () | 1723422..1723862 | + | 441 | WP_001616563.1 | antirestriction protein | - |
| C6N65_RS08920 () | 1723875..1724417 | + | 543 | WP_001616564.1 | DNA repair protein RadC | - |
| C6N65_RS08925 () | 1724428..1724769 | + | 342 | WP_032208435.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6N65_RS08930 () | 1724790..1725131 | + | 342 | WP_001616568.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6N65_RS08935 () | 1725379..1726386 | + | 1008 | WP_001616572.1 | restriction endonuclease | - |
| C6N65_RS08945 () | 1727026..1728212 | + | 1187 | Protein_1614 | IS3 family transposase IS2 | Transposase |
| C6N65_RS08955 () | 1728604..1728726 | + | 123 | WP_001300013.1 | hypothetical protein | - |
| C6N65_RS08960 () | 1728734..1729714 | - | 981 | WP_032208436.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| C6N65_RS08965 () | 1729779..1730885 | - | 1107 | WP_032208438.1 | N-acetylneuraminate epimerase | - |
| C6N65_RS08970 () | 1730904..1731620 | - | 717 | WP_071887437.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| C6N65_RS08985 () | 1733076..1733678 | + | 603 | WP_032208450.1 | Tyrosine recombinase XerC | VF |
| C6N65_RS08990 () | 1734156..1734752 | + | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| C6N65_RS09000 () | 1735233..1735781 | + | 549 | WP_032208452.1 | type 1 fimbrial major subunit FimA | - |
| C6N65_RS09005 () | 1735846..1736385 | + | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| C6N65_RS09010 () | 1736422..1737147 | + | 726 | WP_000066573.1 | type 1 fimbria chaperone FimC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|