MGE detailed information
MGE type: Prophage MGE length: 57026 bp
Accession: NZ_CP027323 Location: 977145..1034170 Organism: Escherichia coli strain 2013C-3033 Replicon: chromosome
Accession: NZ_CP027323 Location: 977145..1034170 Organism: Escherichia coli strain 2013C-3033 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N24_RS05200 () | 973052..974251 | + | 1200 | WP_000284709.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| C6N24_RS05205 () | 974244..974945 | + | 702 | WP_001033694.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| C6N24_RS05210 () | 974945..976189 | + | 1245 | WP_001251350.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| C6N24_RS05215 () | 976218..977129 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| C6N24_RS05220 () | 977145..977966 | + | 822 | WP_000952727.1 | NAD-dependent protein deacylase | - |
| C6N24_RS05225 () | 978105..978893 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| C6N24_RS05230 () | 978890..979351 | - | 462 | WP_000076381.1 | DUF3592 domain-containing protein | - |
| C6N24_RS05235 () | 979409..980455 | - | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| C6N24_RS05240 () | 980452..981246 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| C6N24_RS05245 () | 981413..982531 | - | 1119 | WP_016232615.1 | hypothetical protein ; Integrase | Integrase |
| C6N24_RS05250 () | 982500..982769 | - | 270 | WP_000003739.1 | excisionase | - |
| C6N24_RS05255 () | 982831..985323 | - | 2493 | WP_106894364.1 | exonuclease | - |
| C6N24_RS05260 () | 985419..985607 | - | 189 | WP_069357045.1 | DUF1482 family protein | - |
| C6N24_RS05265 () | 985604..985792 | - | 189 | WP_032210920.1 | cell division inhibitor | - |
| C6N24_RS05275 () | 986491..986937 | + | 447 | WP_106894365.1 | hypothetical protein | - |
| C6N24_RS05280 () | 987052..987270 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| C6N24_RS05290 () | 987430..987585 | - | 156 | WP_096852370.1 | DUF1391 family protein | - |
| C6N24_RS05295 () | 987861..988163 | + | 303 | WP_042106859.1 | type II toxin-antitoxin system HigB family toxin | - |
| C6N24_RS05300 () | 988166..988525 | + | 360 | WP_001022416.1 | helix-turn-helix domain-containing protein | - |
| C6N24_RS05305 () | 988572..988964 | - | 393 | WP_096852371.1 | helix-turn-helix domain-containing protein | - |
| C6N24_RS05310 () | 989090..989362 | + | 273 | WP_042106866.1 | helix-turn-helix domain-containing protein | - |
| C6N24_RS05315 () | 989346..989867 | + | 522 | WP_042106855.1 | hypothetical protein | - |
| C6N24_RS05320 () | 989848..990825 | + | 978 | WP_106894366.1 | hypothetical protein | - |
| C6N24_RS05325 () | 990832..991572 | + | 741 | WP_096852373.1 | IS21 family transposase ISCsa9 | Transposase |
| C6N24_RS05330 () | 991602..992318 | + | 717 | WP_096852374.1 | DUF1627 domain-containing protein | - |
| C6N24_RS05335 () | 992351..992632 | + | 282 | WP_106894611.1 | DNA-binding protein | - |
| C6N24_RS05340 () | 992629..992856 | + | 228 | WP_106894367.1 | hypothetical protein | - |
| C6N24_RS05345 () | 992849..993154 | + | 306 | WP_106894368.1 | hypothetical protein | - |
| C6N24_RS05350 () | 993291..993737 | + | 447 | WP_106894369.1 | hypothetical protein | - |
| C6N24_RS05355 () | 993738..993947 | + | 210 | WP_032313438.1 | hypothetical protein | - |
| C6N24_RS05360 () | 993944..994753 | + | 810 | WP_106894370.1 | DUF551 domain-containing protein | - |
| C6N24_RS05365 () | 994873..995157 | - | 285 | WP_106894371.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| C6N24_RS05370 () | 995157..995435 | - | 279 | WP_073568588.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6N24_RS05375 () | 995586..995858 | + | 273 | WP_106894372.1 | hypothetical protein | - |
| C6N24_RS05380 () | 995860..996909 | + | 1050 | WP_106894373.1 | DUF968 domain-containing protein | - |
| C6N24_RS05385 () | 996922..997296 | + | 375 | WP_106894374.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6N24_RS05390 () | 997293..998114 | + | 822 | WP_106894375.1 | antitermination protein | - |
| C6N24_RS05395 () | 998342..998539 | + | 198 | WP_000917768.1 | hypothetical protein | - |
| C6N24_RS05400 () | 998690..999748 | + | 1059 | WP_106894376.1 | site-specific DNA-methyltransferase | - |
| C6N24_RS05415 () | 1000230..1000658 | + | 429 | WP_032210943.1 | cell envelope integrity protein TolA | - |
| C6N24_RS05425 () | 1001181..1003163 | + | 1983 | WP_106894377.1 | SASA family carbohydrate esterase | - |
| C6N24_RS05430 () | 1003311..1003493 | + | 183 | WP_032211246.1 | DUF1378 family protein | - |
| C6N24_RS05435 () | 1003531..1003833 | + | 303 | WP_106894378.1 | DUF826 domain-containing protein | - |
| C6N24_RS05440 () | 1003911..1004126 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| C6N24_RS05445 () | 1004131..1004889 | + | 759 | WP_106894379.1 | YdfR family protein | - |
| C6N24_RS05450 () | 1005396..1005929 | + | 534 | WP_106894380.1 | lysozyme | - |
| C6N24_RS29595 () | 1006122..1006259 | + | 138 | WP_159032339.1 | hypothetical protein | - |
| C6N24_RS29600 () | 1006231..1006413 | + | 183 | WP_159032340.1 | hypothetical protein | - |
| C6N24_RS05460 () | 1006421..1007188 | + | 768 | WP_106894381.1 | DNA adenine methylase | - |
| C6N24_RS29610 () | 1007426..1007611 | + | 186 | WP_122990151.1 | Rz1 family lipoprotein | - |
| C6N24_RS29945 () | 1007608..1007700 | + | 93 | WP_033557025.1 | endopeptidase | - |
| C6N24_RS05470 () | 1007697..1007921 | + | 225 | WP_032211250.1 | hypothetical protein | - |
| C6N24_RS05485 () | 1008267..1008593 | + | 327 | WP_042106362.1 | TonB family protein | - |
| C6N24_RS05490 () | 1008725..1008925 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| C6N24_RS05495 () | 1008967..1009332 | + | 366 | WP_106894382.1 | HNH endonuclease | - |
| C6N24_RS05500 () | 1009622..1010185 | + | 564 | WP_106894383.1 | terminase small subunit | - |
| C6N24_RS05505 () | 1010182..1011843 | + | 1662 | WP_106894384.1 | terminase large subunit | - |
| C6N24_RS05510 () | 1011907..1013844 | + | 1938 | WP_106894385.1 | phage major capsid protein | - |
| C6N24_RS05515 () | 1013889..1014110 | + | 222 | WP_016238136.1 | hypothetical protein | - |
| C6N24_RS05520 () | 1014056..1016640 | + | 2585 | Protein_1008 | phage portal protein | - |
| C6N24_RS05525 () | 1016637..1016963 | + | 327 | WP_000125998.1 | head-tail connector protein | - |
| C6N24_RS05530 () | 1016973..1017323 | + | 351 | WP_016232490.1 | phage head closure protein | - |
| C6N24_RS05535 () | 1017320..1017766 | + | 447 | WP_032270882.1 | HK97 gp10 family phage protein | - |
| C6N24_RS05540 () | 1017763..1018107 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C6N24_RS05545 () | 1018174..1018890 | + | 717 | WP_106894386.1 | immunoglobulin domain-containing protein | - |
| C6N24_RS05550 () | 1018905..1019279 | + | 375 | WP_000710962.1 | phage tail assembly chaperone | - |
| C6N24_RS05555 () | 1019375..1019584 | + | 210 | WP_001513217.1 | DUF4035 domain-containing protein | - |
| C6N24_RS05560 () | 1019632..1022874 | + | 3243 | WP_106894387.1 | phage tail tape measure protein | - |
| C6N24_RS05565 () | 1022867..1023208 | + | 342 | WP_016234509.1 | phage tail protein | - |
| C6N24_RS05570 () | 1023208..1023906 | + | 699 | WP_106894388.1 | phage minor tail protein L | - |
| C6N24_RS05575 () | 1023917..1024660 | + | 744 | WP_073614481.1 | C40 family peptidase | - |
| C6N24_RS05580 () | 1024606..1025238 | + | 633 | WP_159032353.1 | tail assembly protein | - |
| C6N24_RS05585 () | 1025485..1029015 | + | 3531 | WP_106894390.1 | host specificity protein J | - |
| C6N24_RS05590 () | 1029200..1030759 | + | 1560 | WP_159032341.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6N24_RS05595 () | 1030774..1031442 | + | 669 | WP_032211007.1 | DUF4376 domain-containing protein | - |
| C6N24_RS05600 () | 1031921..1033429 | + | 1509 | WP_106894391.1 | Adhesin YadA | VF |
| C6N24_RS05605 () | 1033519..1033992 | + | 474 | WP_032211005.1 | hypothetical protein | - |
| C6N24_RS29615 () | 1033997..1034170 | + | 174 | WP_021565261.1 | hypothetical protein | - |
| C6N24_RS05615 () | 1034976..1035506 | - | 531 | WP_001079074.1 | cytochrome b | - |
| C6N24_RS05620 () | 1035849..1036499 | - | 651 | WP_001007749.1 | metal-binding protein ZinT | - |
| C6N24_RS05625 () | 1036798..1037778 | - | 981 | WP_000399589.1 | IS110-like element IS621 family transposase | - |
| C6N24_RS05635 () | 1038035..1038670 | - | 636 | WP_001240091.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|