MGE detailed information
MGE type: Genomic_island MGE length: 29894 bp
Accession: NZ_CP027323 Location: 593155..623048 Organism: Escherichia coli strain 2013C-3033 Replicon: chromosome
Accession: NZ_CP027323 Location: 593155..623048 Organism: Escherichia coli strain 2013C-3033 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N24_RS03090 () | 588494..589450 | - | 957 | WP_001355621.1 | VirK/YbjX family protein | - |
| C6N24_RS03095 () | 589601..590716 | + | 1116 | WP_000746460.1 | macrolide transporter subunit MacA | - |
| C6N24_RS03100 () | 590713..592659 | + | 1947 | WP_000188193.1 | macrolide ABC transporter ATP-binding protein/permease MacB | - |
| C6N24_RS03105 () | 592732..592956 | - | 225 | WP_000410785.1 | cold shock-like protein CspD | - |
| C6N24_RS30150 () | 593106..593180 | + | 75 | WP_001406719.1 | protein YljB | - |
| C6N24_RS03115 () | 593361..594599 | + | 1239 | WP_032211289.1 | Prophage integrase IntA ; Integrase | Integrase |
| C6N24_RS03120 () | 595011..595220 | + | 210 | WP_032211288.1 | AlpA family phage regulatory protein | - |
| C6N24_RS29560 () | 595338..595586 | - | 249 | WP_157906231.1 | hypothetical protein | - |
| C6N24_RS03125 () | 595590..595799 | - | 210 | WP_106894327.1 | hypothetical protein | - |
| C6N24_RS03130 () | 595896..596123 | - | 228 | WP_050437335.1 | hypothetical protein | - |
| C6N24_RS03135 () | 596356..596592 | + | 237 | WP_106894609.1 | host cell division inhibitor Icd-like protein | - |
| C6N24_RS03140 () | 596517..596702 | + | 186 | WP_106894328.1 | hypothetical protein | - |
| C6N24_RS03145 () | 596706..596915 | + | 210 | WP_106894329.1 | hypothetical protein | - |
| C6N24_RS03150 () | 596960..597163 | + | 204 | WP_106894330.1 | hypothetical protein | - |
| C6N24_RS03155 () | 597221..597520 | + | 300 | WP_106894331.1 | DUF4222 domain-containing protein | - |
| C6N24_RS03160 () | 597517..599265 | + | 1749 | WP_106894332.1 | DNA primase | - |
| C6N24_RS03165 () | 599614..600054 | + | 441 | WP_032211280.1 | single-stranded DNA-binding protein | - |
| C6N24_RS03170 () | 600140..600538 | + | 399 | WP_077698280.1 | ProQ/FinO family protein | - |
| C6N24_RS03175 () | 600507..600800 | + | 294 | WP_032211279.1 | PerC family transcriptional regulator | - |
| C6N24_RS03180 () | 601252..601638 | - | 387 | WP_106894333.1 | hypothetical protein | - |
| C6N24_RS03185 () | 601726..602046 | + | 321 | WP_106894334.1 | PerC family transcriptional regulator | - |
| C6N24_RS29565 () | 602030..602224 | + | 195 | WP_106904516.1 | hypothetical protein | - |
| C6N24_RS29930 () | 602372..602560 | + | 189 | WP_032211276.1 | hypothetical protein | - |
| C6N24_RS03195 () | 603581..604279 | - | 699 | WP_050437333.1 | transcriptional regulator NanR | - |
| C6N24_RS03200 () | 604745..605638 | + | 894 | WP_106894335.1 | N-acetylneuraminate lyase | - |
| C6N24_RS03205 () | 605720..607207 | + | 1488 | WP_032211274.1 | MFS transporter | - |
| C6N24_RS03210 () | 607232..607651 | + | 420 | WP_106894336.1 | hypothetical protein | - |
| C6N24_RS03215 () | 607651..608544 | + | 894 | WP_106894337.1 | N-acetylmannosamine kinase | - |
| C6N24_RS03220 () | 608602..609318 | + | 717 | WP_106894338.1 | N-acetylneuraminic acid channel protein | - |
| C6N24_RS03225 () | 609338..610444 | + | 1107 | WP_032211271.1 | N-acetylneuraminate epimerase | - |
| C6N24_RS03230 () | 610526..611434 | - | 909 | Protein_585 | IS4 family transposase ISCro3 | Transposase |
| C6N24_RS03235 () | 611521..611703 | + | 183 | WP_032211270.1 | hypothetical protein | - |
| C6N24_RS29570 () | 611712..612206 | - | 495 | WP_159032337.1 | hypothetical protein | - |
| C6N24_RS03240 () | 612243..612635 | + | 393 | Protein_588 | antitermination protein | - |
| C6N24_RS29575 () | 612900..613076 | - | 177 | WP_157906243.1 | hypothetical protein | - |
| C6N24_RS03245 () | 613483..613857 | - | 375 | WP_032211268.1 | hypothetical protein | - |
| C6N24_RS03250 () | 614097..616538 | + | 2442 | WP_106894339.1 | DEAD/DEAH box helicase family protein | - |
| C6N24_RS03255 () | 616607..618076 | + | 1470 | WP_106894340.1 | type I restriction-modification system subunit M | - |
| C6N24_RS03260 () | 618076..619836 | + | 1761 | WP_106894341.1 | restriction endonuclease subunit S | - |
| C6N24_RS03270 () | 621207..621518 | - | 312 | WP_032211263.1 | IS66 family transposase ISCro1 | Transposase |
| C6N24_RS03275 () | 621515..621946 | - | 432 | WP_159032338.1 | transposase | - |
| C6N24_RS03285 () | 622397..622747 | + | 351 | WP_032211261.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6N24_RS03290 () | 622749..623048 | + | 300 | WP_032211260.1 | XRE family transcriptional regulator | Antitoxin Detail |
| C6N24_RS03295 () | 623167..623355 | + | 189 | WP_157906239.1 | hypothetical protein | - |
| C6N24_RS03300 () | 623698..624348 | + | 651 | WP_106894343.1 | IS66-like element accessory protein TnpA | - |
| C6N24_RS03305 () | 624348..624695 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C6N24_RS03310 () | 624715..626280 | + | 1566 | WP_106894344.1 | IS66 family transposase | - |
| C6N24_RS03320 () | 626569..626889 | + | 321 | WP_000520781.1 | ATP-dependent Clp protease adapter ClpS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|