MGE detailed information
MGE type: Genomic_island MGE length: 39868 bp
Accession: NZ_CP027323 Location: 3224791..3264658 Organism: Escherichia coli strain 2013C-3033 Replicon: chromosome
Accession: NZ_CP027323 Location: 3224791..3264658 Organism: Escherichia coli strain 2013C-3033 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N24_RS17140 () | 3219803..3224125 | - | 4323 | WP_001053450.1 | YadA-like family protein | - |
| C6N24_RS17150 () | 3224791..3226839 | - | 2049 | WP_000792540.1 | TonB-dependent siderophore receptor IreA | - |
| C6N24_RS17155 () | 3227605..3228711 | + | 1107 | Protein_3167 | IS110 family transposase | - |
| C6N24_RS17160 () | 3228814..3229122 | - | 309 | Protein_3168 | IS3 family transposase ISLad1 | Transposase |
| C6N24_RS17165 () | 3229139..3229819 | - | 681 | Protein_3169 | transposase | - |
| C6N24_RS17175 () | 3230022..3231053 | - | 1032 | WP_000416155.1 | LacI family DNA-binding transcriptional regulator | - |
| C6N24_RS17180 () | 3231324..3231767 | + | 444 | WP_000916813.1 | PTS sugar transporter subunit IIA | - |
| C6N24_RS17185 () | 3231783..3232070 | + | 288 | WP_000705929.1 | PTS sugar transporter subunit IIB | - |
| C6N24_RS17190 () | 3232083..3233339 | + | 1257 | WP_000345351.1 | PTS ascorbate transporter subunit IIC | - |
| C6N24_RS17195 () | 3233556..3233840 | - | 285 | WP_000436078.1 | IS66 family transposase IS682 | Transposase |
| C6N24_RS17200 () | 3234261..3235274 | - | 1014 | WP_000107483.1 | aldose 1-epimerase family protein | - |
| C6N24_RS17205 () | 3235286..3236602 | - | 1317 | WP_000998354.1 | L-fucose:H+ symporter permease | - |
| C6N24_RS17210 () | 3236630..3237550 | - | 921 | WP_000350265.1 | ribokinase | - |
| C6N24_RS17215 () | 3237855..3238637 | + | 783 | WP_001298267.1 | DeoR family transcriptional regulator | - |
| C6N24_RS30045 () | 3238639..3238865 | - | 227 | Protein_3179 | acetolactate synthase small subunit | - |
| C6N24_RS29785 () | 3239545..3239682 | - | 138 | WP_001371476.1 | hypothetical protein | - |
| C6N24_RS17235 () | 3240032..3240439 | - | 408 | WP_074405438.1 | inovirus-type Gp2 protein | - |
| C6N24_RS17240 () | 3240626..3240823 | - | 198 | WP_000553833.1 | inovirus-type Gp2 protein | - |
| C6N24_RS17245 () | 3241071..3241496 | - | 426 | WP_033801398.1 | hypothetical protein | - |
| C6N24_RS17250 () | 3241493..3241876 | - | 384 | WP_024175299.1 | hypothetical protein | - |
| C6N24_RS17255 () | 3242247..3242847 | - | 601 | Protein_3185 | inovirus-type Gp2 protein | - |
| C6N24_RS17265 () | 3244124..3244915 | + | 792 | WP_001335904.1 | hypothetical protein | - |
| C6N24_RS17270 () | 3245301..3245507 | + | 207 | WP_001371489.1 | AlpA family transcriptional regulator | - |
| C6N24_RS17275 () | 3245601..3246203 | + | 603 | WP_000813431.1 | hypothetical protein | - |
| C6N24_RS17280 () | 3246676..3246891 | + | 216 | WP_001327829.1 | hypothetical protein | - |
| C6N24_RS29790 () | 3247033..3247329 | + | 297 | Protein_3190 | IS21 family transposase | - |
| C6N24_RS17305 () | 3248579..3249754 | + | 1176 | WP_000263652.1 | hypothetical protein | - |
| C6N24_RS17310 () | 3250613..3251347 | - | 735 | WP_197732443.1 | restriction endonuclease | - |
| C6N24_RS17315 () | 3251523..3252125 | - | 603 | Protein_3193 | hypothetical protein ; Integrase | Integrase |
| C6N24_RS17320 () | 3252357..3253301 | + | 945 | WP_032351765.1 | hypothetical protein | - |
| C6N24_RS17325 () | 3253474..3254232 | - | 759 | WP_024213478.1 | hypothetical protein | - |
| C6N24_RS17335 () | 3254740..3255612 | + | 873 | WP_001069783.1 | GTPase family protein | - |
| C6N24_RS17340 () | 3255984..3258830 | + | 2847 | WP_000820514.1 | Ag43/Cah family autotransporter adhesin | - |
| C6N24_RS17345 () | 3258901..3259134 | + | 234 | WP_001117568.1 | DUF905 family protein | - |
| C6N24_RS17350 () | 3259225..3260043 | + | 819 | WP_033884686.1 | DUF945 domain-containing protein | - |
| C6N24_RS17355 () | 3260133..3260618 | + | 486 | WP_000214386.1 | antirestriction protein | - |
| C6N24_RS17360 () | 3260634..3261110 | + | 477 | WP_001186727.1 | RadC family protein | - |
| C6N24_RS17365 () | 3261173..3261394 | + | 222 | WP_000692358.1 | DUF987 domain-containing protein | - |
| C6N24_RS17370 () | 3261557..3261931 | + | 375 | WP_024175300.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| C6N24_RS17375 () | 3261978..3262355 | + | 378 | WP_000854896.1 | TA system toxin CbtA family protein | Toxin Detail |
| C6N24_RS17380 () | 3262352..3262840 | + | 489 | WP_000761662.1 | hypothetical protein | - |
| C6N24_RS17385 () | 3262852..3263049 | + | 198 | WP_000839256.1 | DUF957 domain-containing protein | - |
| C6N24_RS17390 () | 3263134..3264000 | + | 867 | WP_000014510.1 | DUF4942 domain-containing protein | - |
| C6N24_RS17395 () | 3264072..3264335 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| C6N24_RS17400 () | 3264332..3264658 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C6N24_RS17410 () | 3265072..3265608 | - | 537 | WP_000942798.1 | GspM family type II secretion system protein YghD | - |
| C6N24_RS17415 () | 3265610..3266788 | - | 1179 | WP_000094987.1 | type II secretion system protein GspL | - |
| C6N24_RS17420 () | 3266785..3267762 | - | 978 | WP_000633193.1 | type II secretion system minor pseudopilin GspK | - |
| C6N24_RS17425 () | 3267759..3268364 | - | 606 | WP_001255041.1 | type II secretion system minor pseudopilin GspJ | - |
| C6N24_RS17430 () | 3268361..3268732 | - | 372 | WP_000820125.1 | type II secretion system minor pseudopilin GspI | - |
| C6N24_RS17435 () | 3268729..3269292 | - | 564 | WP_001115140.1 | type II secretion system minor pseudopilin GspH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|