MGE detailed information
MGE type: Prophage MGE length: 53327 bp
Accession: NZ_CP027323 Location: 2001450..2054776 Organism: Escherichia coli strain 2013C-3033 Replicon: chromosome
Accession: NZ_CP027323 Location: 2001450..2054776 Organism: Escherichia coli strain 2013C-3033 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N24_RS10935 () | 1996578..1996880 | + | 303 | WP_071780837.1 | YkgJ family cysteine cluster protein | - |
| C6N24_RS10940 () | 1997333..2001358 | - | 4026 | WP_106894448.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| C6N24_RS10950 () | 2001632..2002102 | - | 471 | WP_001539080.1 | hypothetical protein | - |
| C6N24_RS10955 () | 2002191..2003360 | - | 1170 | WP_106894449.1 | Adhesin YadA | VF |
| C6N24_RS10960 () | 2004053..2004634 | - | 582 | WP_106894450.1 | DUF4376 domain-containing protein | - |
| C6N24_RS10965 () | 2004651..2006141 | - | 1491 | WP_106894451.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6N24_RS10970 () | 2006326..2009856 | - | 3531 | WP_106894452.1 | host specificity protein J | - |
| C6N24_RS10980 () | 2010108..2010740 | - | 633 | WP_126502673.1 | tail assembly protein | - |
| C6N24_RS10985 () | 2010686..2011429 | - | 744 | WP_106894454.1 | C40 family peptidase | - |
| C6N24_RS10990 () | 2011440..2012138 | - | 699 | WP_012601557.1 | phage minor tail protein L | - |
| C6N24_RS10995 () | 2012138..2012479 | - | 342 | WP_000807940.1 | phage tail protein | - |
| C6N24_RS11000 () | 2012472..2015714 | - | 3243 | WP_106894455.1 | phage tail tape measure protein | - |
| C6N24_RS11005 () | 2015762..2015971 | - | 210 | WP_159032355.1 | DUF4035 domain-containing protein | - |
| C6N24_RS11010 () | 2016067..2016441 | - | 375 | WP_106894457.1 | phage tail assembly chaperone | - |
| C6N24_RS11015 () | 2016456..2017172 | - | 717 | WP_106894458.1 | immunoglobulin domain-containing protein | - |
| C6N24_RS11020 () | 2017238..2017582 | - | 345 | WP_042103714.1 | DUF3168 domain-containing protein | - |
| C6N24_RS11025 () | 2017579..2018025 | - | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| C6N24_RS11030 () | 2018022..2018372 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| C6N24_RS11035 () | 2018382..2018708 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| C6N24_RS11040 () | 2018705..2021451 | - | 2747 | Protein_2034 | phage portal protein | - |
| C6N24_RS11045 () | 2021397..2021618 | - | 222 | WP_016238136.1 | hypothetical protein | - |
| C6N24_RS11050 () | 2021663..2023600 | - | 1938 | WP_106894385.1 | phage major capsid protein | - |
| C6N24_RS11055 () | 2023664..2025325 | - | 1662 | WP_106894384.1 | terminase large subunit | - |
| C6N24_RS11060 () | 2025322..2025885 | - | 564 | WP_106894383.1 | terminase small subunit | - |
| C6N24_RS11065 () | 2026175..2026540 | - | 366 | WP_106894382.1 | HNH endonuclease | - |
| C6N24_RS11070 () | 2026582..2026782 | + | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| C6N24_RS11075 () | 2026914..2027240 | - | 327 | WP_042106362.1 | TonB family protein | - |
| C6N24_RS11090 () | 2027586..2027810 | - | 225 | WP_032211250.1 | hypothetical protein | - |
| C6N24_RS29980 () | 2027807..2027899 | - | 93 | WP_033557025.1 | endopeptidase | - |
| C6N24_RS29720 () | 2027896..2028081 | - | 186 | WP_122990151.1 | Rz1 family lipoprotein | - |
| C6N24_RS11100 () | 2028319..2029086 | - | 768 | WP_106894381.1 | DNA adenine methylase | - |
| C6N24_RS29730 () | 2029094..2029276 | - | 183 | WP_159032340.1 | hypothetical protein | - |
| C6N24_RS29735 () | 2029248..2029385 | - | 138 | WP_159032339.1 | hypothetical protein | - |
| C6N24_RS11110 () | 2029578..2030111 | - | 534 | WP_106894380.1 | lysozyme | - |
| C6N24_RS11115 () | 2030618..2031376 | - | 759 | WP_106894379.1 | YdfR family protein | - |
| C6N24_RS11120 () | 2031381..2031596 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| C6N24_RS11125 () | 2031674..2031976 | - | 303 | WP_106894378.1 | DUF826 domain-containing protein | - |
| C6N24_RS11130 () | 2032014..2032196 | - | 183 | WP_032211246.1 | DUF1378 family protein | - |
| C6N24_RS11135 () | 2032344..2034326 | - | 1983 | WP_106894377.1 | SASA family carbohydrate esterase | - |
| C6N24_RS11145 () | 2034849..2035277 | - | 429 | WP_032210943.1 | cell envelope integrity protein TolA | - |
| C6N24_RS11160 () | 2035758..2036816 | - | 1059 | WP_106894376.1 | site-specific DNA-methyltransferase | - |
| C6N24_RS11165 () | 2036967..2037164 | - | 198 | WP_000917768.1 | hypothetical protein | - |
| C6N24_RS11170 () | 2037392..2038213 | - | 822 | WP_106894375.1 | antitermination protein | - |
| C6N24_RS11175 () | 2038210..2038584 | - | 375 | WP_106894374.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6N24_RS11180 () | 2038597..2039646 | - | 1050 | WP_106894373.1 | DUF968 domain-containing protein | - |
| C6N24_RS11185 () | 2039648..2039920 | - | 273 | WP_106894372.1 | hypothetical protein | - |
| C6N24_RS11190 () | 2040071..2040349 | + | 279 | WP_073568588.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6N24_RS11195 () | 2040349..2040633 | + | 285 | WP_106894371.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| C6N24_RS11200 () | 2040753..2041562 | - | 810 | WP_106894370.1 | DUF551 domain-containing protein | - |
| C6N24_RS11205 () | 2041559..2041768 | - | 210 | WP_032313438.1 | hypothetical protein | - |
| C6N24_RS11210 () | 2041769..2042215 | - | 447 | WP_106894369.1 | hypothetical protein | - |
| C6N24_RS11215 () | 2042352..2042657 | - | 306 | WP_106894368.1 | hypothetical protein | - |
| C6N24_RS11220 () | 2042650..2042877 | - | 228 | WP_106894367.1 | hypothetical protein | - |
| C6N24_RS11225 () | 2042874..2043155 | - | 282 | WP_106894618.1 | DNA-binding protein | - |
| C6N24_RS11230 () | 2043188..2043904 | - | 717 | WP_106894459.1 | DUF1627 domain-containing protein | - |
| C6N24_RS11235 () | 2043934..2044674 | - | 741 | WP_106894460.1 | IS21 family transposase ISKpn7 | Transposase |
| C6N24_RS11240 () | 2044681..2045643 | - | 963 | WP_106894619.1 | helix-turn-helix domain-containing protein | - |
| C6N24_RS11245 () | 2045666..2046091 | - | 426 | WP_073568595.1 | Rha family transcriptional regulator | - |
| C6N24_RS11250 () | 2046075..2046398 | - | 324 | WP_106894461.1 | transcriptional regulator | - |
| C6N24_RS11255 () | 2046523..2046999 | + | 477 | WP_106894462.1 | hypothetical protein | - |
| C6N24_RS11260 () | 2047311..2047466 | + | 156 | WP_000379557.1 | DUF1391 family protein | - |
| C6N24_RS11270 () | 2047626..2047844 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| C6N24_RS11275 () | 2047959..2048405 | - | 447 | WP_032210921.1 | hypothetical protein | - |
| C6N24_RS11280 () | 2049104..2049292 | + | 189 | WP_106894463.1 | cell division inhibitor | - |
| C6N24_RS11285 () | 2049289..2049477 | + | 189 | WP_000199478.1 | DUF1482 family protein | - |
| C6N24_RS11290 () | 2049570..2052008 | + | 2439 | WP_106894464.1 | exonuclease | - |
| C6N24_RS11295 () | 2052067..2052270 | + | 204 | WP_000096346.1 | DUF4224 domain-containing protein | - |
| C6N24_RS11300 () | 2052270..2053295 | + | 1026 | WP_032210917.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6N24_RS11310 () | 2053531..2054328 | + | 798 | WP_001300307.1 | DgsA anti-repressor MtfA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|