MGE detailed information
MGE type: Prophage MGE length: 65371 bp
Accession: NZ_CP027319 Location: 516058..581428 Organism: Escherichia coli strain 2014C-3084 Replicon: chromosome
Accession: NZ_CP027319 Location: 516058..581428 Organism: Escherichia coli strain 2014C-3084 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAG01_RS02745 () | 512149..512514 | + | 366 | WP_000276150.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| AAG01_RS02750 () | 512501..512830 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| AAG01_RS02755 () | 512869..513690 | - | 822 | WP_001260835.1 | serine protease | - |
| AAG01_RS02760 () | 513790..513873 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| AAG01_RS02765 () | 513966..514274 | - | 309 | WP_001342195.1 | acid resistance repetitive basic protein Asr | - |
| AAG01_RS02775 () | 514698..515951 | - | 1254 | WP_000091829.1 | MFS transporter | - |
| AAG01_RS02780 () | 516058..516951 | + | 894 | WP_001019530.1 | Hca operon transcriptional activator HcaR | VF |
| AAG01_RS02785 () | 517086..518306 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| AAG01_RS02790 () | 518431..519126 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| AAG01_RS02795 () | 519079..520371 | - | 1293 | WP_071792357.1 | voltage-gated ClC-type chloride channel ClcB | - |
| AAG01_RS02800 () | 520530..521144 | - | 615 | WP_000148724.1 | Tat proofreading chaperone DmsD | - |
| AAG01_RS02805 () | 521187..522041 | - | 855 | WP_000526512.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| AAG01_RS02810 () | 522043..522660 | - | 618 | WP_000213025.1 | dimethylsulfoxide reductase subunit B | - |
| AAG01_RS02815 () | 522671..523615 | - | 945 | Protein_557 | molybdopterin-dependent oxidoreductase | - |
| AAG01_RS02820 () | 523669..524882 | + | 1214 | WP_162908516.1 | IS3 family transposase IS629 | Transposase |
| AAG01_RS02825 () | 524921..526408 | - | 1488 | Protein_559 | molybdopterin-dependent oxidoreductase | - |
| AAG01_RS02830 () | 526469..528895 | - | 2427 | WP_000041657.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| AAG01_RS02835 () | 529094..529399 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| AAG01_RS02840 () | 529507..530217 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| AAG01_RS02845 () | 530220..530780 | - | 561 | WP_001138582.1 | spermidine N1-acetyltransferase | - |
| AAG01_RS02850 () | 530815..531156 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| AAG01_RS02855 () | 531327..531617 | + | 291 | WP_229020656.1 | YnfA family protein | - |
| AAG01_RS02860 () | 531823..533037 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AAG01_RS02865 () | 533049..534068 | + | 1020 | WP_000836060.1 | Zn-dependent oxidoreductase | - |
| AAG01_RS02870 () | 534256..535551 | - | 1296 | WP_001206148.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AAG01_RS02875 () | 535571..535822 | - | 252 | WP_000005551.1 | excisionase family protein | - |
| AAG01_RS02880 () | 535892..538363 | - | 2472 | WP_106873512.1 | exonuclease | - |
| AAG01_RS02885 () | 538457..538648 | - | 192 | WP_001098307.1 | DUF1482 family protein | - |
| AAG01_RS02890 () | 538645..538833 | - | 189 | WP_000413705.1 | cell division inhibition protein DicB | - |
| AAG01_RS02895 () | 539401..539610 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| AAG01_RS02900 () | 539611..540249 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| AAG01_RS02905 () | 540261..540413 | - | 153 | WP_000379563.1 | DUF1391 family protein | - |
| AAG01_RS02910 () | 540580..540987 | - | 408 | WP_000379972.1 | helix-turn-helix domain-containing protein | - |
| AAG01_RS02915 () | 541071..541301 | + | 231 | WP_000920571.1 | dicB transcriptional regulator DicC | - |
| AAG01_RS02920 () | 541285..541836 | + | 552 | WP_000705369.1 | toxin YdaT family protein | - |
| AAG01_RS02925 () | 541808..542848 | + | 1041 | WP_000020565.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| AAG01_RS02930 () | 542841..543302 | + | 462 | WP_000139476.1 | replication protein P | - |
| AAG01_RS02935 () | 543337..544107 | + | 771 | WP_000537580.1 | DUF1627 domain-containing protein | - |
| AAG01_RS02940 () | 544123..544515 | + | 393 | WP_001141097.1 | DUF977 family protein | - |
| AAG01_RS02945 () | 544512..544808 | + | 297 | WP_001266133.1 | DUF4406 domain-containing protein | - |
| AAG01_RS02950 () | 544805..545180 | + | 376 | Protein_584 | ead/Ea22-like family protein | - |
| AAG01_RS02955 () | 545158..545514 | + | 357 | WP_000403783.1 | hypothetical protein | - |
| AAG01_RS02960 () | 545565..545777 | + | 213 | WP_000935422.1 | hypothetical protein | - |
| AAG01_RS02965 () | 545811..545993 | + | 183 | WP_001224662.1 | hypothetical protein | - |
| AAG01_RS02970 () | 545986..546162 | + | 177 | WP_000753069.1 | hypothetical protein | - |
| AAG01_RS24000 () | 546159..546494 | + | 336 | Protein_589 | ead/Ea22-like family protein | - |
| AAG01_RS02980 () | 546856..547212 | + | 357 | WP_000403779.1 | hypothetical protein | - |
| AAG01_RS02985 () | 547261..547473 | + | 213 | WP_000063625.1 | hypothetical protein | - |
| AAG01_RS02990 () | 547674..548387 | + | 714 | WP_000555106.1 | DUF551 domain-containing protein | - |
| AAG01_RS02995 () | 548503..548607 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| - | 548783..548841 | - | 59 | - | - | Antitoxin Detail |
| AAG01_RS03000 () | 548853..549008 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| AAG01_RS03005 () | 549111..549428 | - | 318 | WP_000042395.1 | DNA-binding transcriptional regulator | - |
| AAG01_RS03010 () | 549421..549792 | - | 372 | WP_001217944.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AAG01_RS03015 () | 550049..550243 | + | 195 | WP_000701093.1 | hypothetical protein | - |
| AAG01_RS03020 () | 550297..550566 | + | 270 | WP_012817785.1 | hypothetical protein | - |
| AAG01_RS03025 () | 550568..551617 | + | 1050 | WP_106873513.1 | DUF968 domain-containing protein | - |
| AAG01_RS03030 () | 551631..552383 | + | 753 | WP_001047111.1 | antitermination protein | - |
| AAG01_RS03035 () | 552665..552844 | + | 180 | WP_250220475.1 | site-specific DNA-methyltransferase | - |
| AAG01_RS03055 () | 553225..553449 | + | 225 | WP_000735807.1 | hypothetical protein | - |
| AAG01_RS03060 () | 553502..553711 | + | 210 | WP_000498121.1 | hypothetical protein | - |
| AAG01_RS03065 () | 553901..554332 | + | 432 | WP_001299632.1 | tellurite resistance protein | - |
| AAG01_RS03070 () | 554329..554496 | + | 168 | WP_000216636.1 | DUF3927 family protein | - |
| AAG01_RS24005 () | 554691..554834 | - | 144 | Protein_606 | hypothetical protein | - |
| AAG01_RS03075 () | 554811..556661 | + | 1851 | WP_000023191.1 | SASA family carbohydrate esterase | - |
| AAG01_RS03080 () | 557100..557309 | + | 210 | Protein_608 | class II holin family protein | - |
| AAG01_RS03085 () | 557319..557663 | + | 345 | WP_000731192.1 | YdfR family protein | - |
| AAG01_RS03090 () | 557714..558247 | + | 534 | WP_000992128.1 | lysozyme | - |
| AAG01_RS03095 () | 558404..558586 | + | 183 | WP_072095843.1 | hypothetical protein | - |
| AAG01_RS03100 () | 558599..558730 | + | 132 | WP_001280927.1 | hypothetical protein | - |
| AAG01_RS03105 () | 558953..559159 | + | 207 | WP_071974579.1 | Rz1 family lipoprotein | - |
| AAG01_RS03110 () | 559224..559448 | + | 225 | WP_000735655.1 | hypothetical protein | - |
| AAG01_RS03115 () | 559935..560441 | + | 507 | WP_001429103.1 | terminase small subunit | - |
| AAG01_RS03120 () | 560413..562341 | + | 1929 | WP_024182572.1 | phage terminase large subunit family protein | - |
| AAG01_RS03125 () | 562325..562531 | + | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| AAG01_RS03130 () | 562528..564120 | + | 1593 | WP_000831776.1 | phage portal protein | - |
| AAG01_RS03135 () | 564110..565615 | + | 1506 | WP_001253979.1 | S49 family peptidase | - |
| AAG01_RS03140 () | 565652..565999 | + | 348 | WP_000256824.1 | head decoration protein | - |
| AAG01_RS03145 () | 566057..567085 | + | 1029 | WP_000522591.1 | major capsid protein | - |
| AAG01_RS03150 () | 567137..567520 | + | 384 | WP_000201501.1 | DNA-packaging protein FI | - |
| AAG01_RS03155 () | 567513..567866 | + | 354 | WP_001204554.1 | head-tail joining protein | - |
| AAG01_RS03160 () | 567882..568415 | + | 534 | WP_000974986.1 | phage tail protein | - |
| AAG01_RS03165 () | 568412..568807 | + | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| AAG01_RS03170 () | 568815..569567 | + | 753 | WP_000235112.1 | phage tail protein | - |
| AAG01_RS03175 () | 569581..570003 | + | 423 | WP_106873515.1 | phage minor tail protein G | - |
| AAG01_RS03180 () | 570030..570443 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| AAG01_RS03185 () | 570424..573036 | + | 2613 | WP_000081787.1 | phage tail tape measure protein | - |
| AAG01_RS03190 () | 573033..573362 | + | 330 | WP_000847298.1 | phage tail protein | - |
| AAG01_RS03195 () | 573362..574060 | + | 699 | WP_106873516.1 | phage minor tail protein L | - |
| AAG01_RS03200 () | 574071..574814 | + | 744 | WP_106873517.1 | C40 family peptidase | - |
| AAG01_RS03205 () | 574811..575392 | + | 582 | WP_136139762.1 | tail assembly protein | - |
| AAG01_RS03210 () | 575639..579112 | + | 3474 | WP_106873519.1 | host specificity protein J | - |
| AAG01_RS03215 () | 579180..579779 | + | 600 | WP_047083230.1 | Outer membrane protein X | VF |
| AAG01_RS03220 () | 579844..581157 | + | 1314 | WP_106873520.1 | ISNCY family transposase KIS | Transposase |
| AAG01_RS03225 () | 581159..581428 | + | 270 | WP_001101700.1 | phage tail fiber C-terminal domain-containing protein | - |
| AAG01_RS03230 () | 581831..582849 | + | 1019 | Protein_638 | type III secretion system effector zinc metalloprotease NleC | - |
| AAG01_RS03235 () | 583653..584087 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| AAG01_RS03240 () | 584228..585361 | - | 1134 | WP_000837918.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|