MGE detailed information
MGE type: Prophage MGE length: 48177 bp
Accession: NZ_CP027317 Location: 5197092..5245268 Organism: Escherichia coli strain 2015C-3107 Replicon: chromosome
Accession: NZ_CP027317 Location: 5197092..5245268 Organism: Escherichia coli strain 2015C-3107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N21_RS27315 () | 5192999..5194198 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| C6N21_RS27320 () | 5194191..5194892 | + | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| C6N21_RS27325 () | 5194892..5196136 | + | 1245 | WP_001251388.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| C6N21_RS27330 () | 5196165..5197076 | + | 912 | WP_000291280.1 | N-acetylglucosamine kinase | - |
| C6N21_RS27335 () | 5197092..5197913 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| C6N21_RS27340 () | 5198069..5199115 | - | 1047 | WP_000759317.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| C6N21_RS27345 () | 5199112..5199906 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| C6N21_RS27350 () | 5200215..5200418 | + | 204 | WP_000824186.1 | hypothetical protein | - |
| C6N21_RS27355 () | 5200396..5200863 | + | 468 | WP_001113310.1 | DUF2335 domain-containing protein | - |
| C6N21_RS27360 () | 5200940..5202058 | - | 1119 | WP_000074974.1 | hypothetical protein ; Integrase | Integrase |
| C6N21_RS27365 () | 5202027..5202296 | - | 270 | WP_000003742.1 | excisionase | - |
| C6N21_RS27370 () | 5202358..5204829 | - | 2472 | WP_000048560.1 | exonuclease | - |
| C6N21_RS27375 () | 5204953..5205174 | - | 222 | WP_000560212.1 | cell division protein FtsZ | - |
| C6N21_RS27385 () | 5205887..5206186 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C6N21_RS27395 () | 5206539..5206817 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C6N21_RS27400 () | 5206819..5207010 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C6N21_RS27405 () | 5207031..5207402 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| C6N21_RS27410 () | 5207500..5207802 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C6N21_RS27415 () | 5207799..5208224 | + | 426 | WP_000693944.1 | Rha family transcriptional regulator | - |
| C6N21_RS27420 () | 5208247..5209209 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| C6N21_RS27425 () | 5209250..5209672 | + | 423 | WP_001151187.1 | DUF977 family protein | - |
| C6N21_RS27430 () | 5209778..5209990 | + | 213 | WP_000935423.1 | hypothetical protein | - |
| C6N21_RS27435 () | 5210023..5210241 | + | 219 | WP_000209148.1 | DUF4014 family protein | - |
| C6N21_RS29465 () | 5210243..5210401 | + | 159 | WP_001370098.1 | hypothetical protein | - |
| C6N21_RS27440 () | 5210405..5211961 | - | 1557 | WP_001066422.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N21_RS27445 () | 5211981..5212328 | - | 348 | WP_000631725.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N21_RS27450 () | 5212325..5212999 | - | 675 | WP_001341423.1 | IS66 family transposase ISSfl3 | Transposase |
| C6N21_RS27455 () | 5213005..5213223 | + | 219 | WP_136865621.1 | hypothetical protein | - |
| C6N21_RS27460 () | 5213234..5214103 | + | 870 | WP_000208016.1 | DUF551 domain-containing protein | - |
| C6N21_RS27465 () | 5214219..5214323 | + | 105 | WP_001278454.1 | hypothetical protein | - |
| C6N21_RS27475 () | 5214569..5214724 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C6N21_RS27480 () | 5214842..5215189 | + | 348 | WP_000756560.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| C6N21_RS27485 () | 5215310..5215582 | + | 273 | WP_000046991.1 | hypothetical protein | - |
| C6N21_RS27490 () | 5215584..5216633 | + | 1050 | WP_001265272.1 | DUF968 domain-containing protein | - |
| C6N21_RS27495 () | 5216646..5217020 | + | 375 | WP_001121083.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6N21_RS27500 () | 5217017..5217838 | + | 822 | WP_000762899.1 | antitermination protein | - |
| C6N21_RS27505 () | 5218064..5218261 | + | 198 | WP_000917750.1 | hypothetical protein | - |
| C6N21_RS27510 () | 5218412..5219470 | + | 1059 | WP_000935558.1 | site-specific DNA-methyltransferase | - |
| C6N21_RS27530 () | 5219929..5220360 | + | 432 | Protein_5039 | tellurite resistance TerB family protein | - |
| C6N21_RS27535 () | 5220357..5220488 | + | 132 | WP_001344632.1 | DUF3927 family protein | - |
| C6N21_RS27540 () | 5220931..5222781 | + | 1851 | WP_032212668.1 | SASA family carbohydrate esterase | - |
| C6N21_RS27550 () | 5223219..5223434 | + | 216 | WP_053897820.1 | class II holin family protein | - |
| C6N21_RS27555 () | 5223479..5224691 | - | 1213 | Protein_5043 | IS3 family transposase IS629 | Transposase |
| C6N21_RS27575 () | 5226417..5226689 | - | 273 | WP_000138558.1 | hypothetical protein | - |
| C6N21_RS27585 () | 5226849..5227382 | + | 534 | WP_001003112.1 | lysozyme | - |
| C6N21_RS29475 () | 5228029..5228235 | + | 207 | WP_001208682.1 | Rz1 family lipoprotein | - |
| C6N21_RS27600 () | 5228300..5228524 | + | 225 | WP_000735655.1 | hypothetical protein | - |
| C6N21_RS27615 () | 5230148..5230288 | + | 141 | WP_000347013.1 | hypothetical protein | - |
| C6N21_RS27620 () | 5230418..5230531 | - | 114 | WP_032208049.1 | DUF3950 domain-containing protein | - |
| C6N21_RS27625 () | 5230599..5230933 | + | 335 | Protein_5052 | IS3 family transposase ISSfl10 | Transposase |
| C6N21_RS27630 () | 5230999..5232155 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| C6N21_RS27635 () | 5232232..5232909 | + | 678 | WP_106875775.1 | immunoglobulin domain-containing protein | - |
| C6N21_RS27640 () | 5232924..5233298 | + | 375 | WP_000710949.1 | phage tail assembly chaperone | - |
| C6N21_RS27645 () | 5233394..5233603 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C6N21_RS27650 () | 5233655..5236897 | + | 3243 | WP_000212947.1 | phage tail tape measure protein | - |
| C6N21_RS27655 () | 5236890..5237231 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C6N21_RS27660 () | 5237231..5237929 | + | 699 | WP_032212666.1 | phage minor tail protein L | - |
| C6N21_RS27665 () | 5237940..5238683 | + | 744 | WP_000194757.1 | C40 family peptidase | - |
| C6N21_RS27670 () | 5238629..5239258 | + | 630 | WP_124983447.1 | tail assembly protein | - |
| C6N21_RS27675 () | 5239499..5242975 | + | 3477 | WP_106875776.1 | host specificity protein J | - |
| C6N21_RS27680 () | 5243044..5243619 | + | 576 | WP_024174257.1 | Attachment invasion locus protein | VF |
| C6N21_RS27685 () | 5243684..5244997 | + | 1314 | WP_032212660.1 | ISNCY family transposase KIS | Transposase |
| C6N21_RS27690 () | 5244999..5245268 | + | 270 | WP_032212659.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6N21_RS27695 () | 5245394..5246146 | - | 753 | WP_012817749.1 | type III effector | - |
| C6N21_RS27710 () | 5247262..5248380 | + | 1119 | WP_001370123.1 | hydrogenase 1 small subunit | - |
| C6N21_RS27715 () | 5248377..5250170 | + | 1794 | WP_000107384.1 | Ni/Fe-hydrogenase large subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|