MGE detailed information
MGE type: Prophage MGE length: 61950 bp
Accession: NZ_CP027317 Location: 3433553..3495502 Organism: Escherichia coli strain 2015C-3107 Replicon: chromosome
Accession: NZ_CP027317 Location: 3433553..3495502 Organism: Escherichia coli strain 2015C-3107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N21_RS18090 () | 3428944..3429441 | + | 498 | WP_001295693.1 | chorismate lyase | - |
| C6N21_RS18095 () | 3429454..3430326 | + | 873 | WP_000455240.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| C6N21_RS18100 () | 3430481..3432904 | - | 2424 | WP_000017353.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| C6N21_RS18105 () | 3433075..3433443 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| C6N21_RS18110 () | 3433553..3434161 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| C6N21_RS18115 () | 3434234..3435559 | + | 1326 | WP_001370252.1 | MATE family efflux transporter DinF | - |
| C6N21_RS18120 () | 3435675..3435884 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| C6N21_RS18125 () | 3435926..3436441 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| C6N21_RS18130 () | 3436759..3437745 | + | 987 | WP_000912572.1 | DUF2713 domain-containing protein | - |
| C6N21_RS18135 () | 3438108..3438230 | + | 123 | WP_001300034.1 | hypothetical protein | - |
| C6N21_RS18140 () | 3438465..3439037 | + | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| C6N21_RS18145 () | 3439067..3439453 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| C6N21_RS29630 () | 3439493..3439666 | + | 174 | WP_000390069.1 | hypothetical protein | - |
| C6N21_RS18150 () | 3439714..3439995 | - | 282 | WP_001093921.1 | pyocin activator PrtN family protein | - |
| C6N21_RS18155 () | 3440032..3440604 | - | 573 | WP_001061339.1 | 3'-5' exoribonuclease | - |
| C6N21_RS18160 () | 3440604..3441338 | - | 735 | WP_001094871.1 | DUF551 domain-containing protein | - |
| C6N21_RS18165 () | 3441341..3441532 | - | 192 | WP_001014294.1 | hypothetical protein | - |
| C6N21_RS18170 () | 3441534..3442001 | - | 468 | WP_000829413.1 | hypothetical protein | - |
| C6N21_RS18175 () | 3442148..3442621 | - | 474 | WP_000145671.1 | class I SAM-dependent methyltransferase | - |
| C6N21_RS18180 () | 3442618..3442968 | - | 351 | WP_001242740.1 | hypothetical protein | - |
| C6N21_RS18185 () | 3442959..3443294 | - | 336 | WP_000543621.1 | hypothetical protein | - |
| C6N21_RS18195 () | 3444651..3444809 | - | 159 | Protein_3347 | 5'-deoxynucleotidase | - |
| C6N21_RS18200 () | 3444937..3445761 | - | 825 | WP_000081294.1 | YfdQ family protein | - |
| C6N21_RS18205 () | 3445827..3446189 | - | 363 | WP_000135680.1 | hypothetical protein | - |
| C6N21_RS18215 () | 3446647..3447300 | - | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| C6N21_RS18220 () | 3447396..3447593 | + | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| C6N21_RS18225 () | 3447621..3448205 | + | 585 | WP_000514175.1 | hypothetical protein | - |
| C6N21_RS18230 () | 3448202..3449368 | + | 1167 | WP_001087349.1 | Rha family phage regulatory protein | - |
| C6N21_RS18235 () | 3449365..3449559 | + | 195 | WP_000626861.1 | hypothetical protein | - |
| C6N21_RS29635 () | 3449556..3449780 | + | 225 | WP_000618008.1 | hypothetical protein | - |
| C6N21_RS18245 () | 3449777..3450601 | + | 825 | WP_000061545.1 | helix-turn-helix domain-containing protein | - |
| C6N21_RS18250 () | 3450612..3451511 | + | 900 | WP_000988265.1 | ATP-binding protein | - |
| C6N21_RS18255 () | 3451508..3452908 | + | 1401 | WP_000203855.1 | replicative DNA helicase | - |
| C6N21_RS18260 () | 3452905..3453162 | + | 258 | WP_001370224.1 | hypothetical protein | - |
| C6N21_RS18265 () | 3453214..3454203 | + | 990 | WP_001370152.1 | DUF968 domain-containing protein | - |
| C6N21_RS18270 () | 3454217..3454603 | + | 387 | Protein_3361 | antitermination protein | - |
| C6N21_RS18275 () | 3454678..3455855 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| C6N21_RS18280 () | 3455865..3456230 | + | 366 | Protein_3363 | antitermination protein | - |
| C6N21_RS18290 () | 3456540..3456692 | + | 153 | WP_001339373.1 | restriction endonuclease subunit M | - |
| C6N21_RS18315 () | 3457515..3459377 | + | 1863 | WP_000143128.1 | DUF1737 domain-containing protein | - |
| C6N21_RS18320 () | 3459527..3459742 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| C6N21_RS18325 () | 3459747..3460091 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| C6N21_RS18330 () | 3460142..3460675 | + | 534 | WP_000992088.1 | lysozyme | - |
| C6N21_RS18335 () | 3460946..3461515 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C6N21_RS29355 () | 3461515..3461661 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C6N21_RS29360 () | 3461884..3462069 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C6N21_RS18350 () | 3462595..3462909 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C6N21_RS18355 () | 3462991..3463215 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C6N21_RS18365 () | 3463602..3464147 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C6N21_RS18370 () | 3464122..3466047 | + | 1926 | WP_106875761.1 | phage terminase large subunit family protein | - |
| C6N21_RS18375 () | 3466044..3466250 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C6N21_RS18380 () | 3466247..3467848 | + | 1602 | WP_024026143.1 | phage portal protein | - |
| C6N21_RS18385 () | 3467829..3469148 | + | 1320 | WP_032282457.1 | S49 family peptidase | - |
| C6N21_RS18390 () | 3469158..3469490 | + | 333 | WP_001299443.1 | head decoration protein | - |
| C6N21_RS18395 () | 3469546..3470571 | + | 1026 | WP_024025845.1 | major capsid protein | - |
| C6N21_RS18400 () | 3470613..3471008 | + | 396 | WP_000158899.1 | DNA-packaging protein FI | - |
| C6N21_RS18405 () | 3471020..3471373 | + | 354 | WP_000753019.1 | head-tail joining protein | - |
| C6N21_RS18410 () | 3471385..3471962 | + | 578 | Protein_3383 | phage tail protein | - |
| C6N21_RS18415 () | 3471959..3472354 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| C6N21_RS18420 () | 3472362..3473114 | + | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| C6N21_RS18425 () | 3473128..3473550 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| C6N21_RS18430 () | 3473577..3473990 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C6N21_RS18435 () | 3473971..3476583 | + | 2613 | WP_032212771.1 | phage tail tape measure protein | - |
| C6N21_RS18440 () | 3476580..3476909 | + | 330 | WP_000847401.1 | phage tail protein | - |
| C6N21_RS18445 () | 3476909..3477607 | + | 699 | WP_001299882.1 | phage minor tail protein L | - |
| C6N21_RS18450 () | 3477613..3478356 | + | 744 | WP_001370115.1 | C40 family peptidase | - |
| C6N21_RS18455 () | 3478302..3478937 | + | 636 | WP_077696211.1 | tail assembly protein | - |
| C6N21_RS18460 () | 3479173..3482565 | + | 3393 | WP_106875762.1 | host specificity protein J | - |
| C6N21_RS18465 () | 3482632..3483231 | + | 600 | WP_001230379.1 | Outer membrane protein X | VF |
| C6N21_RS18470 () | 3483296..3484609 | + | 1314 | WP_032212803.1 | ISNCY family transposase KIS | Transposase |
| C6N21_RS18475 () | 3484611..3484874 | + | 264 | WP_024174195.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6N21_RS18480 () | 3484880..3486093 | + | 1214 | WP_164502361.1 | IS3 family transposase IS629 | Transposase |
| C6N21_RS18485 () | 3486077..3486193 | + | 117 | WP_001370118.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6N21_RS18495 () | 3486334..3487210 | + | 877 | Protein_3399 | hypothetical protein | VF |
| C6N21_RS29365 () | 3487435..3488085 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| C6N21_RS18510 () | 3488089..3488349 | - | 261 | Protein_3401 | hypothetical protein | - |
| C6N21_RS18520 () | 3489946..3490194 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| C6N21_RS18525 () | 3490256..3491353 | - | 1098 | WP_000332271.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6N21_RS18530 () | 3491442..3492479 | + | 1038 | WP_000543822.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| C6N21_RS18535 () | 3492613..3492855 | + | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| C6N21_RS18540 () | 3493021..3494004 | - | 984 | Protein_3407 | quinone oxidoreductase | - |
| C6N21_RS18545 () | 3494087..3495502 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| C6N21_RS18550 () | 3495555..3496633 | + | 1079 | Protein_3409 | alanine racemase | - |
| C6N21_RS18555 () | 3496886..3498079 | + | 1194 | WP_000486966.1 | aromatic amino acid transaminase | - |
| C6N21_RS29640 () | 3498301..3498804 | - | 504 | WP_024174219.1 | hypothetical protein | - |
| C6N21_RS18565 () | 3499206..3499919 | + | 714 | WP_001307512.1 | acid phosphatase AphA | - |
| C6N21_RS18570 () | 3500030..3500446 | + | 417 | WP_000270372.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|