MGE detailed information
MGE type: Prophage MGE length: 110758 bp
Accession: NZ_CP027317 Location: 176039..286796 Organism: Escherichia coli strain 2015C-3107 Replicon: chromosome
Accession: NZ_CP027317 Location: 176039..286796 Organism: Escherichia coli strain 2015C-3107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N21_RS29715 () | 172028..172075 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C6N21_RS00975 () | 172089..173072 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C6N21_RS00980 () | 173347..173520 | + | 174 | WP_001296046.1 | hypothetical protein | - |
| C6N21_RS00985 () | 173550..174923 | + | 1374 | WP_000123758.1 | ATP-dependent RNA helicase DbpA | - |
| C6N21_RS00990 () | 175052..175987 | - | 936 | WP_001157421.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C6N21_RS00995 () | 176039..177274 | - | 1236 | WP_000040852.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C6N21_RS01000 () | 177276..177491 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C6N21_RS01005 () | 177570..177779 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 177595..177773 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 177595..177773 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 177595..177773 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 177595..177773 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C6N21_RS01010 () | 177772..177966 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C6N21_RS01015 () | 178023..178832 | - | 810 | WP_000595429.1 | recombination protein RecT | - |
| C6N21_RS01020 () | 178825..181494 | - | 2670 | WP_000102191.1 | exodeoxyribonuclease VIII | - |
| C6N21_RS01025 () | 181575..181751 | - | 177 | WP_000245534.1 | hypothetical protein | - |
| C6N21_RS01030 () | 181745..181966 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| C6N21_RS01035 () | 182391..182543 | - | 153 | WP_001169149.1 | DUF1391 family protein | - |
| C6N21_RS01045 () | 182924..183388 | - | 465 | WP_001253182.1 | helix-turn-helix domain-containing protein | - |
| C6N21_RS01050 () | 183507..183767 | + | 261 | WP_071829568.1 | helix-turn-helix domain-containing protein | - |
| C6N21_RS01055 () | 183751..184173 | + | 423 | WP_000702023.1 | hypothetical protein | - |
| C6N21_RS01060 () | 184186..185041 | + | 856 | Protein_200 | DUF1376 domain-containing protein | - |
| C6N21_RS01065 () | 185048..185794 | + | 747 | WP_000788989.1 | ATP-binding protein | - |
| C6N21_RS01070 () | 185816..186577 | + | 762 | WP_001370676.1 | DUF1627 domain-containing protein | - |
| C6N21_RS01075 () | 186593..187009 | + | 417 | WP_001151266.1 | DUF977 family protein | - |
| C6N21_RS01080 () | 187006..187479 | + | 474 | WP_001275735.1 | class I SAM-dependent methyltransferase | - |
| C6N21_RS01085 () | 187802..188380 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| C6N21_RS01090 () | 188340..189437 | - | 1098 | WP_000156213.1 | beta family protein | - |
| C6N21_RS01100 () | 191256..191411 | + | 156 | WP_000813257.1 | type I toxin-antitoxin system toxin HokD | - |
| C6N21_RS01105 () | 191623..191802 | + | 180 | WP_000119356.1 | hypothetical protein | - |
| C6N21_RS01110 () | 191821..192306 | + | 486 | WP_000818166.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| C6N21_RS29515 () | 192535..192708 | + | 174 | WP_000687447.1 | hypothetical protein | - |
| C6N21_RS01115 () | 192768..193367 | + | 600 | WP_000940340.1 | DUF1367 family protein | - |
| C6N21_RS01120 () | 193367..193657 | + | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| C6N21_RS01125 () | 193654..194208 | + | 555 | WP_000640170.1 | DUF1133 family protein | - |
| C6N21_RS01135 () | 194479..195036 | + | 558 | Protein_215 | ORF6N domain-containing protein | - |
| C6N21_RS01150 () | 195750..197696 | + | 1947 | WP_106875738.1 | DUF1737 domain-containing protein | - |
| C6N21_RS01155 () | 197833..198012 | + | 180 | WP_000142777.1 | DUF1378 family protein | - |
| C6N21_RS01160 () | 198053..198298 | + | 246 | WP_001290233.1 | DUF826 domain-containing protein | - |
| C6N21_RS01165 () | 198375..198590 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| C6N21_RS01170 () | 198595..199128 | + | 534 | WP_000087730.1 | lysozyme | - |
| C6N21_RS01175 () | 199399..199968 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C6N21_RS29110 () | 199968..200114 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C6N21_RS29120 () | 200342..200527 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C6N21_RS01190 () | 201043..201519 | + | 477 | WP_000348566.1 | DUF1441 family protein | - |
| C6N21_RS01195 () | 201516..202523 | + | 1008 | WP_086260490.1 | phage terminase large subunit family protein | - |
| C6N21_RS01200 () | 202685..203923 | + | 1239 | WP_000114064.1 | Prophage integrase IntA ; Integrase | Integrase |
| C6N21_RS01205 () | 203916..204140 | + | 225 | WP_000229066.1 | hypothetical protein | - |
| C6N21_RS01210 () | 204200..204778 | + | 579 | WP_001038673.1 | hypothetical protein | - |
| C6N21_RS29125 () | 204899..205078 | - | 180 | WP_000201455.1 | hypothetical protein | - |
| C6N21_RS01220 () | 205273..205470 | + | 198 | WP_024176648.1 | host cell division inhibitor Icd-like protein | - |
| C6N21_RS01225 () | 205463..205687 | + | 225 | WP_000335965.1 | hypothetical protein | - |
| C6N21_RS01230 () | 205680..206048 | + | 369 | WP_000551747.1 | hypothetical protein | - |
| C6N21_RS01235 () | 206041..206274 | + | 234 | WP_001204082.1 | hypothetical protein | - |
| C6N21_RS01240 () | 206267..206466 | + | 200 | Protein_234 | hypothetical protein | - |
| C6N21_RS01245 () | 206471..206713 | + | 243 | WP_000728901.1 | DUF4222 domain-containing protein | - |
| C6N21_RS01250 () | 206710..208524 | + | 1815 | WP_000761774.1 | DNA primase | - |
| C6N21_RS01255 () | 208812..209057 | + | 246 | WP_001399692.1 | hypothetical protein | - |
| C6N21_RS01260 () | 209054..209476 | + | 423 | WP_000126660.1 | single-stranded DNA-binding protein | - |
| C6N21_RS01270 () | 210134..212023 | + | 1890 | WP_000860401.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| C6N21_RS01280 () | 212281..212562 | + | 282 | WP_000133409.1 | hypothetical protein | - |
| C6N21_RS01285 () | 212930..214048 | + | 1119 | Protein_241 | phage terminase large subunit family protein | - |
| C6N21_RS01290 () | 214045..214257 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| C6N21_RS01295 () | 214185..215765 | + | 1581 | WP_077633710.1 | phage portal protein | - |
| C6N21_RS01300 () | 215710..217560 | + | 1851 | Protein_244 | ATP-dependent Clp protease proteolytic subunit | VF |
| C6N21_RS01305 () | 217626..218782 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| C6N21_RS01310 () | 218810..219004 | + | 195 | WP_106875739.1 | hypothetical protein | - |
| C6N21_RS01315 () | 219091..219414 | + | 324 | WP_001097046.1 | DUF2190 family protein | - |
| C6N21_RS01320 () | 219407..219682 | + | 276 | WP_001283147.1 | DNA breaking-rejoining protein | - |
| C6N21_RS01325 () | 219694..220272 | + | 579 | WP_000677106.1 | phage tail protein | - |
| C6N21_RS01330 () | 220269..220670 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| C6N21_RS01335 () | 220682..221425 | + | 744 | WP_000211089.1 | phage tail protein | - |
| C6N21_RS01340 () | 221486..221872 | + | 387 | WP_001370402.1 | phage minor tail protein G | - |
| C6N21_RS01345 () | 221881..222210 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| C6N21_RS01350 () | 222182..225247 | + | 3066 | WP_000372036.1 | phage tail tape measure protein | - |
| C6N21_RS01355 () | 225247..225576 | + | 330 | WP_000447255.1 | phage tail protein | - |
| C6N21_RS01360 () | 225586..226284 | + | 699 | WP_001152409.1 | phage minor tail protein L | - |
| C6N21_RS01365 () | 226290..227033 | + | 744 | WP_000140752.1 | C40 family peptidase | - |
| C6N21_RS01370 () | 226931..227578 | + | 648 | WP_001399694.1 | tail assembly protein | - |
| C6N21_RS01375 () | 227639..231037 | + | 3399 | WP_000515486.1 | host specificity protein J | - |
| C6N21_RS01380 () | 231104..231703 | + | 600 | WP_001230525.1 | Outer membrane protein X | VF |
| C6N21_RS01385 () | 231768..234722 | + | 2955 | WP_072004194.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6N21_RS01390 () | 234722..235243 | + | 522 | WP_001370405.1 | tail fiber assembly protein | - |
| C6N21_RS01395 () | 235300..236456 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
| C6N21_RS01400 () | 236449..236712 | + | 264 | WP_048258936.1 | excisionase family protein | - |
| C6N21_RS01405 () | 236732..238027 | + | 1296 | WP_001206148.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C6N21_RS29130 () | 238678..238791 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| C6N21_RS01410 () | 238860..239093 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C6N21_RS01415 () | 239410..239997 | + | 588 | WP_000086528.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C6N21_RS29520 () | 240095..240196 | - | 102 | WP_199851202.1 | tail fiber assembly protein | - |
| C6N21_RS01425 () | 240269..242731 | - | 2463 | WP_000102122.1 | exonuclease | - |
| C6N21_RS01430 () | 242824..243012 | - | 189 | WP_000199475.1 | DUF1482 family protein | - |
| C6N21_RS01435 () | 243009..243197 | - | 189 | WP_000449175.1 | cell division inhibitor | - |
| C6N21_RS01445 () | 243762..243971 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C6N21_RS01450 () | 243972..244610 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C6N21_RS01455 () | 244622..244774 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C6N21_RS29135 () | 245067..245405 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C6N21_RS01465 () | 245797..246039 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C6N21_RS01470 () | 246023..246448 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C6N21_RS29140 () | 246517..247584 | + | 1068 | WP_001262401.1 | hypothetical protein | - |
| C6N21_RS01485 () | 247577..248038 | + | 462 | WP_000139447.1 | replication protein | - |
| C6N21_RS01490 () | 248072..248788 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C6N21_RS01495 () | 248821..249102 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C6N21_RS01500 () | 249099..249326 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C6N21_RS01505 () | 249319..249630 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C6N21_RS01510 () | 249758..249976 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C6N21_RS01515 () | 249978..250535 | + | 558 | WP_000104475.1 | DUF551 domain-containing protein | - |
| C6N21_RS01520 () | 250826..250981 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | - |
| C6N21_RS01525 () | 251101..251445 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C6N21_RS01530 () | 251567..251839 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C6N21_RS01535 () | 251841..252890 | + | 1050 | WP_106875740.1 | DUF968 domain-containing protein | - |
| C6N21_RS01540 () | 252903..253262 | + | 360 | WP_001217447.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6N21_RS01545 () | 253271..253825 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C6N21_RS01550 () | 254050..254247 | + | 198 | WP_000917748.1 | hypothetical protein | - |
| C6N21_RS01555 () | 254382..255095 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C6N21_RS01570 () | 255546..255977 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| C6N21_RS01575 () | 255974..256229 | + | 256 | Protein_296 | DUF3927 family protein | - |
| C6N21_RS01585 () | 256456..258306 | + | 1851 | WP_000023191.1 | SASA family carbohydrate esterase | - |
| C6N21_RS01595 () | 258745..258960 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| C6N21_RS01600 () | 258965..259309 | + | 345 | WP_000731236.1 | YdfR family protein | - |
| C6N21_RS01605 () | 259360..259893 | + | 534 | WP_000992167.1 | lysozyme | - |
| C6N21_RS01610 () | 260164..260733 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C6N21_RS29145 () | 260733..260879 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C6N21_RS29150 () | 261102..261287 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C6N21_RS01625 () | 261813..262127 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C6N21_RS01630 () | 262209..262433 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C6N21_RS01640 () | 262820..263365 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C6N21_RS01645 () | 263340..265265 | + | 1926 | WP_001027230.1 | phage terminase large subunit family protein | - |
| C6N21_RS01650 () | 265262..265468 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C6N21_RS01655 () | 265465..267066 | + | 1602 | WP_024026143.1 | phage portal protein | - |
| C6N21_RS01660 () | 267047..268366 | + | 1320 | WP_032212710.1 | S49 family peptidase | - |
| C6N21_RS01665 () | 268376..268708 | + | 333 | WP_001299443.1 | head decoration protein | - |
| C6N21_RS01670 () | 268764..269789 | + | 1026 | WP_024025845.1 | major capsid protein | - |
| C6N21_RS01675 () | 269831..270226 | + | 396 | WP_000158899.1 | DNA-packaging protein FI | - |
| C6N21_RS01680 () | 270238..270591 | + | 354 | WP_000753019.1 | head-tail joining protein | - |
| C6N21_RS01685 () | 270603..271180 | + | 578 | Protein_315 | phage tail protein | - |
| C6N21_RS01690 () | 271177..271572 | + | 396 | WP_000683137.1 | phage minor tail U family protein | - |
| C6N21_RS01695 () | 271580..272332 | + | 753 | WP_000235098.1 | Ig domain-containing protein | - |
| C6N21_RS01700 () | 272346..272768 | + | 423 | WP_000479045.1 | phage minor tail protein G | - |
| C6N21_RS01705 () | 272795..273208 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C6N21_RS01710 () | 273189..275801 | + | 2613 | WP_032212711.1 | phage tail tape measure protein | - |
| C6N21_RS01715 () | 275798..276127 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C6N21_RS01720 () | 276127..276825 | + | 699 | WP_032212713.1 | phage minor tail protein L | - |
| C6N21_RS01725 () | 276836..277579 | + | 744 | WP_032212700.1 | C40 family peptidase | - |
| C6N21_RS01730 () | 277525..278154 | + | 630 | WP_136865629.1 | tail assembly protein | - |
| C6N21_RS01735 () | 278386..281859 | + | 3474 | WP_106875741.1 | host specificity protein J | - |
| C6N21_RS01740 () | 281927..282526 | + | 600 | WP_001230471.1 | Outer membrane protein X | VF |
| C6N21_RS01745 () | 282591..283904 | + | 1314 | WP_032212629.1 | ISNCY family transposase KIS | Transposase |
| C6N21_RS01750 () | 283906..284175 | + | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| C6N21_RS01760 () | 284578..285591 | + | 1014 | WP_122993102.1 | hypothetical protein | VF |
| C6N21_RS01770 () | 287651..288085 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| C6N21_RS01775 () | 288226..289359 | - | 1134 | WP_000837940.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|