MGE detailed information
MGE type: Prophage MGE length: 54399 bp
Accession: NZ_CP027310 Location: 890418..944816 Organism: Escherichia coli strain 2014C-4135 Replicon: chromosome
Accession: NZ_CP027310 Location: 890418..944816 Organism: Escherichia coli strain 2014C-4135 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N22_RS04500 () | 885473..885889 | - | 417 | WP_000270372.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| C6N22_RS04505 () | 886000..886713 | - | 714 | WP_001315956.1 | acid phosphatase AphA | - |
| C6N22_RS26530 () | 887115..887618 | + | 504 | WP_001027717.1 | hypothetical protein | - |
| C6N22_RS04515 () | 887840..889033 | - | 1194 | WP_000486997.1 | aromatic amino acid transaminase | - |
| C6N22_RS04520 () | 889286..890365 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| C6N22_RS04525 () | 890418..891833 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| C6N22_RS04530 () | 891916..892899 | + | 984 | WP_000235518.1 | L-threonine 3-dehydrogenase | VF |
| C6N22_RS04535 () | 893065..893307 | - | 243 | WP_000891389.1 | envelope stress response protein PspG | - |
| C6N22_RS04540 () | 893441..894478 | - | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| C6N22_RS04545 () | 894567..895664 | + | 1098 | WP_032209684.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C6N22_RS04550 () | 895726..895974 | + | 249 | WP_032209683.1 | DinI family protein | - |
| C6N22_RS04555 () | 896244..896915 | - | 672 | WP_050866830.1 | DUF4376 domain-containing protein | - |
| C6N22_RS04560 () | 896957..898684 | - | 1728 | WP_050866831.1 | ISNCY family transposase KIS | Transposase |
| C6N22_RS04565 () | 898826..898966 | - | 141 | WP_000078852.1 | Hok/Gef family protein | - |
| C6N22_RS04570 () | 899164..902631 | - | 3468 | WP_106904060.1 | host specificity protein J | - |
| C6N22_RS04575 () | 902871..903509 | - | 639 | WP_047634908.1 | tail assembly protein | - |
| C6N22_RS04580 () | 903407..904150 | - | 744 | WP_050866984.1 | C40 family peptidase | - |
| C6N22_RS04585 () | 904161..904859 | - | 699 | WP_021574157.1 | phage minor tail protein L | - |
| C6N22_RS04590 () | 904859..905188 | - | 330 | WP_021574156.1 | phage tail protein | - |
| C6N22_RS04595 () | 905185..907781 | - | 2597 | Protein_832 | phage tail tape measure protein | - |
| C6N22_RS04600 () | 907762..908175 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| C6N22_RS04605 () | 908202..908633 | - | 432 | WP_000479116.1 | phage minor tail protein G | - |
| C6N22_RS04610 () | 908647..909399 | - | 753 | WP_000235046.1 | phage tail protein | - |
| C6N22_RS04615 () | 909407..909802 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| C6N22_RS04620 () | 909799..910374 | - | 576 | WP_024213759.1 | phage tail protein | - |
| C6N22_RS04625 () | 910390..910743 | - | 354 | WP_001204554.1 | tail attachment protein | - |
| C6N22_RS04630 () | 910736..911119 | - | 384 | WP_000201501.1 | DNA-packaging protein FI | - |
| C6N22_RS04635 () | 911171..912199 | - | 1029 | WP_000522591.1 | major capsid protein | - |
| C6N22_RS04640 () | 912257..912604 | - | 348 | WP_000256823.1 | head decoration protein | - |
| C6N22_RS04645 () | 912641..914146 | - | 1506 | WP_001253979.1 | S49 family peptidase | - |
| C6N22_RS04650 () | 914136..915728 | - | 1593 | WP_040078097.1 | phage portal protein | - |
| C6N22_RS04655 () | 915725..915931 | - | 207 | WP_000259002.1 | head-tail joining protein | - |
| C6N22_RS04660 () | 915915..917842 | - | 1928 | Protein_845 | phage terminase large subunit family protein | - |
| C6N22_RS04665 () | 917814..918320 | - | 507 | WP_040078692.1 | terminase small subunit | - |
| C6N22_RS04675 () | 919031..919573 | - | 543 | WP_001109015.1 | Rha family transcriptional regulator | - |
| C6N22_RS04680 () | 919776..920213 | - | 438 | WP_032209690.1 | lysis protein | - |
| C6N22_RS26275 () | 920216..920365 | - | 150 | WP_032209664.1 | hypothetical protein | - |
| C6N22_RS04685 () | 920365..920931 | - | 567 | WP_032209662.1 | antirepressor | - |
| C6N22_RS04690 () | 921205..921738 | - | 534 | WP_050866981.1 | lysozyme | - |
| C6N22_RS04695 () | 921863..922150 | + | 288 | WP_000406285.1 | hypothetical protein | - |
| C6N22_RS04700 () | 922155..922382 | - | 228 | WP_001371270.1 | DUF1327 domain-containing protein | - |
| C6N22_RS04705 () | 922410..922967 | - | 558 | WP_050866982.1 | hypothetical protein | - |
| C6N22_RS04710 () | 922971..923186 | - | 216 | WP_000284510.1 | class II holin family protein | - |
| C6N22_RS04720 () | 923682..925655 | - | 1974 | WP_106904061.1 | DUF1737 domain-containing protein | - |
| C6N22_RS04725 () | 925899..926222 | + | 324 | WP_001398907.1 | anti-adapter protein IraM | - |
| C6N22_RS04730 () | 926520..926789 | - | 270 | WP_032209657.1 | Phospholipase A1 | VF |
| C6N22_RS04735 () | 926801..927760 | - | 960 | WP_001365055.1 | Siroheme synthase | VF |
| C6N22_RS04755 () | 928143..929201 | - | 1059 | WP_032209655.1 | site-specific DNA-methyltransferase | - |
| C6N22_RS04760 () | 929352..929549 | - | 198 | WP_000917768.1 | hypothetical protein | - |
| C6N22_RS04765 () | 929765..930144 | - | 380 | Protein_862 | antitermination protein Q | - |
| C6N22_RS04770 () | 930162..931151 | - | 990 | WP_001202275.1 | DUF968 domain-containing protein | - |
| C6N22_RS04775 () | 931159..931956 | - | 798 | WP_001061404.1 | KilA-N domain-containing protein | - |
| C6N22_RS04780 () | 931976..932365 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C6N22_RS04785 () | 932362..932688 | - | 327 | WP_000210155.1 | LexA family transcriptional regulator | - |
| C6N22_RS04790 () | 932685..933338 | - | 654 | WP_001343335.1 | phage N-6-adenine-methyltransferase | - |
| C6N22_RS04795 () | 933338..933832 | - | 495 | WP_072097526.1 | PerC family transcriptional regulator | - |
| C6N22_RS26535 () | 933829..934821 | - | 993 | WP_032209653.1 | hypothetical protein | - |
| C6N22_RS04805 () | 934818..935042 | - | 225 | WP_000620696.1 | hypothetical protein | - |
| C6N22_RS04810 () | 935039..935896 | - | 858 | WP_072097525.1 | Rha family phage regulatory protein | - |
| C6N22_RS04815 () | 935893..937047 | - | 1155 | WP_001087324.1 | Rha family phage regulatory protein | - |
| C6N22_RS04820 () | 937044..937595 | - | 552 | WP_000515863.1 | hypothetical protein | - |
| C6N22_RS04825 () | 937588..937848 | - | 261 | WP_001191680.1 | helix-turn-helix transcriptional regulator | - |
| C6N22_RS04835 () | 937946..938638 | + | 693 | WP_001020631.1 | helix-turn-helix transcriptional regulator | - |
| C6N22_RS04850 () | 939361..939723 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| C6N22_RS04855 () | 939789..940613 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| C6N22_RS04860 () | 940742..941278 | + | 537 | WP_032209649.1 | 5'-deoxynucleotidase | - |
| C6N22_RS04865 () | 941269..942147 | + | 879 | WP_032209648.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| C6N22_RS04870 () | 942144..942347 | + | 204 | WP_000156999.1 | hypothetical protein | - |
| C6N22_RS04875 () | 942340..942579 | + | 240 | WP_000476212.1 | hypothetical protein | - |
| C6N22_RS04880 () | 942576..942887 | + | 312 | WP_032209646.1 | hypothetical protein | - |
| C6N22_RS04885 () | 942887..943429 | + | 543 | WP_032209645.1 | 3'-5' exoribonuclease | - |
| C6N22_RS04890 () | 943466..943738 | + | 273 | WP_032209644.1 | pyocin activator PrtN family protein | - |
| C6N22_RS04895 () | 943772..944320 | - | 549 | WP_032209643.1 | hypothetical protein | Toxin Detail |
| C6N22_RS04900 () | 944343..944816 | - | 474 | WP_000287252.1 | SocA family protein | Antitoxin Detail |
| C6N22_RS04905 () | 945103..945225 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| C6N22_RS04910 () | 945589..946578 | - | 990 | Protein_888 | DUF2713 domain-containing protein | - |
| C6N22_RS04920 () | 946896..947411 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| C6N22_RS04925 () | 947453..947662 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| C6N22_RS04930 () | 947778..949103 | - | 1326 | WP_001298861.1 | MATE family efflux transporter DinF | - |
| C6N22_RS04935 () | 949176..949784 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|