MGE detailed information
MGE type: Conjugative plasmid MGE length: 63664 bp
Accession: NZ_CP027308 Location: 1..63664 Organism: Escherichia coli strain 2015C-3108 Replicon: plasmid unnamed1
Accession: NZ_CP027308 Location: 1..63664 Organism: Escherichia coli strain 2015C-3108 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N27_RS28705 () | 1..801 | - | 801 | Protein_0 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| C6N27_RS28710 () | 851..3850 | - | 3000 | Protein_1 | enterohemolysin EhxA | - |
| C6N27_RS28715 () | 3852..4367 | - | 516 | WP_000839950.1 | hypothetical protein | VF |
| C6N27_RS28725 () | 4890..5386 | - | 497 | Protein_3 | IS3 family transposase | - |
| C6N27_RS28730 () | 5477..5842 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6N27_RS28735 () | 5842..7029 | + | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| C6N27_RS28740 () | 7218..7370 | - | 153 | Protein_6 | IS3 family transposase IS1203 | Transposase |
| C6N27_RS28750 () | 8842..9662 | + | 821 | Protein_7 | polysaccharide deacetylase family protein | - |
| C6N27_RS28755 () | 9662..10768 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C6N27_RS28760 () | 10862..12584 | + | 1723 | Protein_9 | phosphoethanolamine transferase CptA | - |
| C6N27_RS28765 () | 12658..13656 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C6N27_RS28770 () | 13709..13897 | + | 189 | Protein_11 | hypothetical protein | - |
| C6N27_RS28775 () | 13960..15498 | - | 1539 | WP_000998093.1 | IS66 family transposase ISEc8 | Transposase |
| C6N27_RS28780 () | 15548..15896 | - | 349 | Protein_13 | IS66 family transposase ISEc8 | Transposase |
| C6N27_RS28785 () | 15893..16282 | - | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| C6N27_RS28790 () | 16423..16983 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| C6N27_RS28795 () | 17086..17946 | - | 861 | WP_000704529.1 | hypothetical protein | VF |
| C6N27_RS28800 () | 18005..18751 | - | 747 | WP_000205714.1 | conjugal transfer pilus acetylase TraX | - |
| C6N27_RS28805 () | 18771..24041 | - | 5271 | WP_000986985.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| C6N27_RS28810 () | 24041..26195 | - | 2155 | Protein_19 | type IV conjugative transfer system coupling protein TraD | - |
| C6N27_RS28815 () | 26448..27179 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| C6N27_RS28820 () | 27193..27702 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| C6N27_RS28825 () | 27699..29366 | - | 1668 | Protein_22 | conjugal transfer protein TraG | - |
| C6N27_RS28830 () | 29419..30632 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C6N27_RS28835 () | 30674..31837 | - | 1164 | Protein_24 | conjugal transfer mating pair stabilization protein TraG | - |
| C6N27_RS28840 () | 31834..32433 | - | 600 | Protein_25 | conjugal transfer protein TraH | - |
| C6N27_RS28845 () | 32414..32536 | - | 123 | WP_001369729.1 | DUF2689 domain-containing protein | - |
| C6N27_RS28850 () | 32523..33113 | - | 591 | WP_000002783.1 | conjugal transfer protein TraP | - |
| C6N27_RS28855 () | 33103..34530 | - | 1428 | WP_000146670.1 | conjugal transfer protein TraB | - |
| C6N27_RS28860 () | 34530..35234 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| C6N27_RS28865 () | 35245..35811 | - | 567 | WP_000399800.1 | type IV conjugative transfer system protein TraE | - |
| C6N27_RS28870 () | 35833..36144 | - | 312 | WP_000012104.1 | type IV conjugative transfer system protein TraL | - |
| C6N27_RS28875 () | 36159..36518 | - | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| C6N27_RS28880 () | 36551..36946 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| C6N27_RS28885 () | 37045..37734 | - | 690 | WP_000283394.1 | conjugal transfer transcriptional regulator TraJ | - |
| C6N27_RS28890 () | 37921..38304 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| C6N27_RS28895 () | 38718..39227 | + | 510 | Protein_36 | transglycosylase SLT domain-containing protein | - |
| C6N27_RS28900 () | 39524..40345 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| C6N27_RS28905 () | 40466..40753 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| C6N27_RS30410 () | 41097..41321 | + | 225 | WP_001427866.1 | hypothetical protein | - |
| C6N27_RS28925 () | 41675..41833 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 41877..42101 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41877..42101 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41877..42101 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 41877..42101 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| C6N27_RS30415 () | 41913..42101 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| C6N27_RS28930 () | 42070..42833 | - | 764 | Protein_42 | plasmid SOS inhibition protein A | - |
| C6N27_RS28935 () | 42830..43264 | - | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| C6N27_RS28940 () | 43319..45277 | - | 1959 | WP_001145472.1 | ParB/RepB/Spo0J family partition protein | - |
| C6N27_RS28945 () | 45336..45569 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| C6N27_RS28950 () | 45625..46152 | - | 528 | WP_000290792.1 | single-stranded DNA-binding protein | - |
| C6N27_RS28970 () | 46625..46891 | - | 267 | WP_071828223.1 | hypothetical protein | - |
| C6N27_RS28980 () | 47043..47605 | - | 563 | Protein_48 | class I SAM-dependent methyltransferase | - |
| C6N27_RS28985 () | 47652..49013 | - | 1362 | WP_000170683.1 | DUF3560 domain-containing protein | - |
| C6N27_RS28990 () | 49065..49295 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| C6N27_RS29005 () | 50334..50525 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| C6N27_RS29010 () | 50522..50944 | - | 423 | WP_000271680.1 | DUF1380 family protein | - |
| C6N27_RS29015 () | 50991..51293 | - | 303 | WP_072106536.1 | antirestriction protein | - |
| C6N27_RS29025 () | 51666..52031 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| C6N27_RS29030 () | 52031..53218 | + | 1188 | WP_000937595.1 | IS91 family transposase ISEc37 | Transposase |
| C6N27_RS29035 () | 53325..53696 | - | 372 | WP_000086162.1 | restriction endonuclease subunit M | - |
| C6N27_RS29040 () | 53772..54084 | - | 313 | Protein_57 | hypothetical protein | - |
| C6N27_RS29045 () | 54081..54983 | - | 903 | WP_077629034.1 | DUF1281 domain-containing protein | - |
| C6N27_RS29050 () | 55256..56215 | + | 960 | WP_000921961.1 | plasmid segregation protein ParM | - |
| C6N27_RS29055 () | 56215..56610 | + | 396 | WP_000445936.1 | plasmid partitioning/stability family protein | - |
| C6N27_RS29060 () | 56690..57456 | - | 767 | Protein_61 | IS3 family transposase | - |
| C6N27_RS29065 () | 57570..57959 | - | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C6N27_RS29070 () | 58003..58931 | - | 929 | Protein_63 | Catalase-peroxidase | VF |
| C6N27_RS29075 () | 58984..60197 | + | 1214 | WP_162829242.1 | IS3 family transposase IS629 | Transposase |
| C6N27_RS29090 () | 60517..63664 | + | 3148 | WP_106895321.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|