MGE detailed information
MGE type: Prophage MGE length: 17007 bp
Accession: NZ_CP027260 Location: 476073..493079 Organism: Pectobacterium parmentieri strain IFB5427 Replicon: chromosome
Accession: NZ_CP027260 Location: 476073..493079 Organism: Pectobacterium parmentieri strain IFB5427 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E18_RS02215 () | 471570..473081 | - | 1512 | WP_010284628.1 | leucyl aminopeptidase | - |
| C5E18_RS02220 () | 473363..474475 | + | 1113 | WP_033070775.1 | LPS export ABC transporter permease LptF | - |
| C5E18_RS02225 () | 474475..475551 | + | 1077 | WP_012822226.1 | LPS export ABC transporter permease LptG | - |
| C5E18_RS02235 () | 476073..477326 | + | 1254 | WP_033070776.1 | Prophage integrase IntA ; Integrase | Integrase |
| C5E18_RS02240 () | 477410..478641 | + | 1232 | Protein_425 | hypothetical protein | - |
| C5E18_RS02250 () | 478850..479134 | - | 285 | WP_005971242.1 | helix-turn-helix domain-containing protein | - |
| C5E18_RS02255 () | 479124..479444 | - | 321 | WP_005971241.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5E18_RS02260 () | 479731..481767 | - | 2037 | WP_033070779.1 | AAA family ATPase | - |
| C5E18_RS02265 () | 481760..482296 | - | 537 | WP_033070780.1 | ash family protein | - |
| C5E18_RS02270 () | 482293..482493 | - | 201 | WP_014698606.1 | AlpA family transcriptional regulator | - |
| C5E18_RS02275 () | 482496..483374 | - | 879 | WP_033070781.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| C5E18_RS02280 () | 483921..484172 | - | 252 | WP_127087855.1 | hypothetical protein | - |
| C5E18_RS02285 () | 484387..484461 | + | 75 | Protein_433 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| C5E18_RS02295 () | 484630..484848 | - | 219 | Protein_434 | hypothetical protein | - |
| C5E18_RS02300 () | 485153..485614 | + | 462 | WP_033070783.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| C5E18_RS02305 () | 485614..486189 | + | 576 | WP_033070784.1 | PIN domain-containing protein | Toxin Detail |
| C5E18_RS02310 () | 486358..487479 | - | 1122 | WP_033070785.1 | XRE family transcriptional regulator | - |
| C5E18_RS02315 () | 487466..488290 | - | 825 | WP_127087856.1 | hypothetical protein | - |
| C5E18_RS02320 () | 488352..488564 | - | 213 | WP_082218588.1 | DUF1133 family protein | - |
| C5E18_RS02325 () | 489106..490368 | + | 1263 | WP_033070786.1 | Prophage integrase IntA ; Integrase | Integrase |
| C5E18_RS02330 () | 490716..493079 | + | 2364 | WP_033070787.1 | type I restriction-modification system subunit M | - |
| C5E18_RS02335 () | 493079..494506 | + | 1428 | WP_033070788.1 | restriction endonuclease subunit S | - |
| C5E18_RS02340 () | 494503..497751 | + | 3249 | WP_033070789.1 | type I restriction endonuclease subunit R | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|