MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 7951 bp
Accession: NZ_CP027260 Location: 3795223..3803173 Organism: Pectobacterium parmentieri strain IFB5427 Replicon: chromosome
Accession: NZ_CP027260 Location: 3795223..3803173 Organism: Pectobacterium parmentieri strain IFB5427 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5E18_RS17905 () | 3790778..3792229 | + | 1452 | WP_033071866.1 | L-asparagine permease | - |
| C5E18_RS17910 () | 3792321..3794474 | - | 2154 | WP_033071867.1 | ornithine decarboxylase | - |
| C5E18_RS17920 () | 3795390..3796649 | + | 1260 | WP_069704166.1 | Prophage integrase IntS ; Integrase | Integrase |
| C5E18_RS17925 () | 3796755..3796949 | - | 195 | WP_033071869.1 | DUF3950 domain-containing protein | - |
| C5E18_RS17930 () | 3797135..3797476 | + | 342 | WP_033071870.1 | hypothetical protein | - |
| C5E18_RS24785 () | 3798068..3798238 | - | 171 | WP_154665134.1 | hypothetical protein | - |
| C5E18_RS17940 () | 3798380..3799123 | + | 744 | WP_033071872.1 | hypothetical protein | - |
| C5E18_RS17945 () | 3799182..3799400 | + | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C5E18_RS17950 () | 3799403..3799708 | + | 306 | WP_033071873.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C5E18_RS17955 () | 3799814..3800351 | + | 538 | Protein_3462 | exonuclease SbcC | - |
| C5E18_RS17960 () | 3800449..3801027 | - | 579 | WP_033071875.1 | hypothetical protein | - |
| C5E18_RS17965 () | 3801029..3802360 | - | 1332 | WP_033071876.1 | hypothetical protein | - |
| C5E18_RS17970 () | 3803396..3803617 | + | 222 | Protein_3465 | integrase | - |
| C5E18_RS17975 () | 3803738..3804952 | - | 1215 | WP_033071877.1 | tyrosine-type recombinase/integrase | - |
| C5E18_RS17985 () | 3805871..3807937 | + | 2067 | WP_033071878.1 | multicopper oxidase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|