MGE detailed information
MGE type: Prophage MGE length: 53298 bp
Accession: NZ_CP027255 Location: 4366716..4420013 Organism: Escherichia coli strain EC11 Replicon: chromosome
Accession: NZ_CP027255 Location: 4366716..4420013 Organism: Escherichia coli strain EC11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6C13_RS22325 () | 4362097..4362807 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| C6C13_RS22330 () | 4362810..4363370 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C6C13_RS22335 () | 4363405..4363746 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| C6C13_RS22340 () | 4363881..4364207 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| C6C13_RS22350 () | 4364413..4365627 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| C6C13_RS22355 () | 4365639..4366658 | + | 1020 | WP_000836054.1 | Zn-dependent oxidoreductase | - |
| C6C13_RS22365 () | 4366846..4368126 | - | 1281 | WP_041327477.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C6C13_RS22370 () | 4368161..4368412 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C6C13_RS22375 () | 4368485..4370956 | - | 2472 | WP_041327480.1 | exonuclease | - |
| C6C13_RS22380 () | 4371049..4371240 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| C6C13_RS22385 () | 4371237..4371425 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| C6C13_RS22390 () | 4371912..4372487 | - | 576 | WP_000344926.1 | hypothetical protein | - |
| C6C13_RS22395 () | 4372489..4372644 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| C6C13_RS22400 () | 4372837..4373244 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| C6C13_RS22405 () | 4373322..4373549 | + | 228 | WP_000476993.1 | transcriptional regulator | - |
| C6C13_RS22410 () | 4373533..4374054 | + | 522 | WP_000705349.1 | hypothetical protein | - |
| C6C13_RS22415 () | 4374035..4375000 | + | 966 | WP_033803319.1 | phage O protein family | - |
| C6C13_RS22420 () | 4375041..4375463 | + | 423 | WP_041327490.1 | DUF977 family protein | - |
| C6C13_RS22425 () | 4375460..4375816 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| C6C13_RS27015 () | 4376427..4376714 | + | 288 | Protein_4099 | hypothetical protein | - |
| C6C13_RS22440 () | 4377483..4378796 | + | 1314 | WP_033803317.1 | ISNCY family transposase ISCARN112 | Transposase |
| C6C13_RS22450 () | 4379233..4379565 | - | 333 | WP_001301033.1 | protein FlxA | - |
| C6C13_RS22455 () | 4379768..4380073 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| C6C13_RS22460 () | 4380098..4380337 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| C6C13_RS22465 () | 4380337..4380624 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| C6C13_RS22470 () | 4380696..4380851 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| C6C13_RS22475 () | 4381068..4381319 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| C6C13_RS22480 () | 4381386..4381664 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| C6C13_RS22485 () | 4381666..4382715 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| C6C13_RS22490 () | 4382729..4383112 | + | 384 | Protein_4109 | antitermination protein | - |
| C6C13_RS22495 () | 4383183..4384360 | + | 1178 | WP_085968792.1 | IS3 family transposase ISCfr6 | Transposase |
| C6C13_RS22500 () | 4384371..4384742 | + | 372 | Protein_4111 | antitermination protein | - |
| C6C13_RS26785 () | 4385020..4385109 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| C6C13_RS22505 () | 4385164..4385376 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| C6C13_RS22510 () | 4385677..4385892 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| C6C13_RS27195 () | 4386256..4386426 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| C6C13_RS22515 () | 4386646..4386861 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| C6C13_RS22520 () | 4386866..4387177 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| C6C13_RS22525 () | 4387174..4387707 | + | 534 | WP_001092971.1 | lysozyme | - |
| C6C13_RS22530 () | 4387704..4388201 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| C6C13_RS22535 () | 4388565..4388777 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| C6C13_RS22540 () | 4388788..4388976 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| C6C13_RS26790 () | 4388979..4389044 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| C6C13_RS26795 () | 4389124..4389279 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| C6C13_RS22550 () | 4389451..4389624 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| C6C13_RS22555 () | 4389776..4390186 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| C6C13_RS22560 () | 4390244..4390477 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| C6C13_RS22570 () | 4390866..4391411 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| C6C13_RS22575 () | 4391386..4393311 | + | 1926 | WP_001027295.1 | phage terminase large subunit family protein | - |
| C6C13_RS22580 () | 4393308..4393514 | + | 207 | WP_000198149.1 | gpW family protein | - |
| C6C13_RS22585 () | 4393511..4395112 | + | 1602 | WP_106022986.1 | phage portal protein | - |
| C6C13_RS22590 () | 4395093..4396412 | + | 1320 | WP_000123317.1 | S49 family peptidase | - |
| C6C13_RS22595 () | 4396422..4396754 | + | 333 | WP_001358225.1 | head decoration protein | - |
| C6C13_RS22600 () | 4396810..4397835 | + | 1026 | WP_000063254.1 | major capsid protein | - |
| C6C13_RS22605 () | 4397877..4398272 | + | 396 | WP_000158875.1 | DNA-packaging protein FI | - |
| C6C13_RS22610 () | 4398284..4398637 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| C6C13_RS22615 () | 4398649..4399227 | + | 579 | WP_000975081.1 | phage tail protein | - |
| C6C13_RS22620 () | 4399224..4399619 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| C6C13_RS22625 () | 4399627..4400367 | + | 741 | WP_001543784.1 | phage tail protein | - |
| C6C13_RS22630 () | 4400383..4400805 | + | 423 | WP_000479135.1 | phage minor tail protein G | - |
| C6C13_RS22635 () | 4400787..4401221 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| C6C13_RS22640 () | 4401214..4403793 | + | 2580 | WP_000840337.1 | phage tail tape measure protein | - |
| C6C13_RS22645 () | 4403790..4404119 | + | 330 | WP_041328844.1 | phage tail protein | - |
| C6C13_RS22650 () | 4404119..4404817 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| C6C13_RS22655 () | 4404823..4405566 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| C6C13_RS22660 () | 4405503..4406135 | + | 633 | WP_000090891.1 | tail assembly protein | - |
| C6C13_RS22665 () | 4406196..4409675 | + | 3480 | WP_041328841.1 | host specificity protein J | - |
| C6C13_RS22670 () | 4409743..4410342 | + | 600 | WP_001568881.1 | hypothetical protein | VF |
| C6C13_RS22675 () | 4410407..4413478 | + | 3072 | WP_072024347.1 | prophage tail fiber N-terminal domain-containing protein | - |
| C6C13_RS22680 () | 4413478..4414053 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| C6C13_RS22685 () | 4414151..4414741 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C6C13_RS22690 () | 4415058..4415291 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C6C13_RS26800 () | 4415360..4415473 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| C6C13_RS22695 () | 4416078..4417361 | + | 1284 | Protein_4153 | MHS family MFS transporter YdfJ | - |
| C6C13_RS22700 () | 4417450..4418910 | + | 1461 | WP_000527753.1 | mannitol dehydrogenase family protein | - |
| C6C13_RS22705 () | 4418946..4419149 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C6C13_RS22710 () | 4419327..4420013 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C6C13_RS22715 () | 4420102..4420848 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| C6C13_RS22725 () | 4420985..4423030 | + | 2046 | WP_001299399.1 | peptidyl-dipeptidase Dcp | - |
| C6C13_RS22735 () | 4423075..4423593 | - | 519 | WP_001024810.1 | 2-oxo-tetronate isomerase | - |
| C6C13_RS22740 () | 4423869..4424261 | + | 393 | WP_000671744.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|